##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936747.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 326237 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.925361010553676 31.0 30.0 33.0 28.0 34.0 2 31.005989510693148 31.0 31.0 34.0 28.0 34.0 3 30.6252540331109 31.0 30.0 34.0 27.0 34.0 4 34.60751232999323 35.0 35.0 37.0 32.0 37.0 5 34.96610746175327 35.0 35.0 37.0 32.0 37.0 6 34.99330548037163 35.0 35.0 37.0 32.0 37.0 7 31.121629367606985 35.0 35.0 37.0 0.0 37.0 8 33.093361574560824 35.0 35.0 37.0 17.0 37.0 9 36.21362996839721 39.0 35.0 39.0 32.0 39.0 10 35.98392886153318 37.0 35.0 39.0 32.0 39.0 11 36.27432510720734 37.0 35.0 39.0 32.0 39.0 12 36.333460030591255 38.0 35.0 39.0 32.0 39.0 13 36.22273684468653 38.0 35.0 39.0 32.0 39.0 14 37.27355572789107 39.0 36.0 40.0 32.0 41.0 15 37.459092622847805 39.0 36.0 41.0 32.0 41.0 16 37.44799639525866 39.0 36.0 40.0 32.0 41.0 17 37.312904422245175 39.0 36.0 40.0 32.0 41.0 18 37.17093401422892 39.0 36.0 40.0 32.0 41.0 19 36.84644292339618 38.0 35.0 40.0 31.0 41.0 20 36.71452962110368 38.0 35.0 40.0 31.0 41.0 21 36.76621290656792 38.0 35.0 40.0 31.0 41.0 22 36.84199217133556 38.0 35.0 40.0 32.0 41.0 23 36.89085848631516 38.0 35.0 40.0 32.0 41.0 24 36.810193203100816 38.0 35.0 40.0 32.0 41.0 25 36.54529682408801 38.0 35.0 40.0 31.0 41.0 26 36.50661635559425 38.0 35.0 40.0 31.0 41.0 27 36.50245680287644 38.0 35.0 40.0 31.0 41.0 28 36.52664167461079 38.0 35.0 40.0 31.0 41.0 29 36.45003479065833 38.0 35.0 40.0 31.0 41.0 30 36.149725506303696 38.0 35.0 40.0 30.0 41.0 31 36.06142160453903 38.0 35.0 40.0 30.0 41.0 32 35.73952678574165 38.0 35.0 40.0 29.0 41.0 33 35.43440504909008 38.0 34.0 40.0 27.0 41.0 34 35.20122794164978 38.0 34.0 40.0 25.0 41.0 35 34.94078537995384 38.0 34.0 40.0 24.0 41.0 36 34.83586165885537 38.0 34.0 40.0 23.0 41.0 37 34.587174354840194 38.0 34.0 40.0 23.0 41.0 38 34.54803409791042 38.0 34.0 40.0 22.0 41.0 39 34.53174839150679 38.0 34.0 40.0 22.0 41.0 40 34.41282871041605 38.0 34.0 40.0 22.0 41.0 41 34.240555179210205 38.0 33.0 40.0 21.0 41.0 42 34.22185098563315 38.0 33.0 40.0 21.0 41.0 43 34.10962275891453 38.0 33.0 40.0 20.0 41.0 44 33.88849210849781 37.0 33.0 40.0 18.0 41.0 45 33.83229063533566 37.0 33.0 40.0 20.0 41.0 46 33.68556294963477 37.0 33.0 40.0 19.0 41.0 47 33.5945677528913 37.0 32.0 40.0 19.0 41.0 48 33.504495198276096 37.0 32.0 40.0 18.0 41.0 49 33.38755567271646 37.0 32.0 40.0 18.0 41.0 50 33.18795844738641 36.0 32.0 40.0 18.0 41.0 51 31.368744195170994 35.0 29.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 17.0 10 25.0 11 14.0 12 11.0 13 9.0 14 8.0 15 18.0 16 53.0 17 99.0 18 212.0 19 411.0 20 720.0 21 1054.0 22 1748.0 23 2527.0 24 3868.0 25 5445.0 26 6857.0 27 7388.0 28 7368.0 29 7719.0 30 8416.0 31 10547.0 32 13118.0 33 17758.0 34 26753.0 35 29954.0 36 31419.0 37 44687.0 38 57007.0 39 40999.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.16642502229974 20.531392821782937 25.14399041187848 16.158191744038845 2 36.161440915653344 24.70535224392083 24.09322057277378 15.039986267652045 3 27.815667750745625 24.31821038079678 33.17833354279251 14.687788325665082 4 24.93310078255992 22.954171353954333 35.05089857986678 17.061829283618966 5 25.22675233036106 26.205488647823515 31.079246069575184 17.488512952240242 6 22.79201929885329 31.802953067861704 31.700880035066533 13.704147598218471 7 63.34965071405144 16.387472910797978 16.703500829151814 3.5593755459987677 8 73.21180614093436 5.9318838758326 15.965080600912835 4.891229382320215 9 68.23137780202735 5.768199192611506 17.213865993127694 8.786557012233438 10 37.4197286022125 23.579177101309785 25.34997563121289 13.651118665264821 11 27.109126187403636 23.257325196099767 31.984109711651342 17.649438904845248 12 24.541361035075727 20.68312300566766 36.32451254762642 18.451003411630197 13 20.224560672149387 25.971609596704237 37.63215085965111 16.171678871495264 14 17.826917241146774 28.200663934501602 35.12875608836521 18.843662735986417 15 15.476785281865638 24.729567768217585 42.671738643991944 17.121908305924833 16 18.535604483856826 24.27897510092356 36.81372744354564 20.371692971673966 17 17.797797306865867 23.796503768732546 34.912348997814476 23.49334992658711 18 19.55756091430463 24.400052722407327 36.555939393753626 19.48644696953442 19 19.655036062739665 27.04506233198564 32.87058181628693 20.42931978898776 20 20.944282837323787 25.338327657500532 35.41566407243813 18.301725432737552 21 18.930102961957104 27.342392187274893 35.433136033006676 18.29436881776132 22 18.29590144588137 23.259470875467837 34.1132366960216 24.33139098262919 23 16.328619990988148 26.411167341533915 34.8393958993002 22.420816768177737 24 19.25747232839929 23.624542893663193 35.34638928141198 21.77159549652553 25 16.728022879072576 27.85153124875474 33.208679579569456 22.21176629260323 26 16.364483488997266 27.057936408194045 34.764603647041874 21.81297645576682 27 18.63491878603592 26.970576605351326 34.99081955756091 19.40368505105184 28 15.290417702467836 24.911643988879252 38.70253833869242 21.09539996996049 29 18.696530436461835 23.589905498150117 36.483599346487374 21.229964718900675 30 17.803008242474032 25.767770056737895 38.336546743625036 18.092674957163045 31 20.54794520547945 26.040271336482373 33.46616110373747 19.945622354300706 32 20.610476432777396 27.99191998455111 31.517577711908828 19.880025870762665 33 19.985470685421948 25.235641573457336 33.91276893791936 20.866118803201353 34 21.60699123643241 24.61983159482217 33.2102122076895 20.56296496105592 35 18.925505077596963 25.100157247645114 31.658272973329204 24.316064701428715 36 23.655808507312166 23.652436725448066 34.03660529001922 18.655149477220547 37 19.24367867531886 26.243497825200695 36.003273693664426 18.509549805816018 38 18.157351863829057 27.00061611650426 32.419069572120875 22.422962447545803 39 21.93803891036271 26.299285488770437 31.978285724795164 19.78438987607169 40 21.376177441553228 24.46043827033721 32.98644850216254 21.176935785947027 41 21.478863525596424 24.57293317434871 30.372091454985178 23.57611184506969 42 21.482848358708544 23.56293124323728 32.22779758273893 22.726422815315246 43 22.62434978252007 23.912063928984143 30.656547234066032 22.807039054429758 44 19.454568304637426 25.611441988493027 31.85291674457526 23.081072962294282 45 19.43249845970874 25.291429237027067 30.35400644316862 24.922065860095575 46 22.720292302835055 26.16870557294237 30.765976881837435 20.345025242385137 47 19.02727158476813 24.016589166771396 35.30960620653084 21.64653304192964 48 19.880945447634694 24.130310173278936 32.54535812921281 23.44338624987356 49 20.236821697109768 22.210540190107192 35.05059205424278 22.502046058540266 50 19.168579897436526 22.82481754062231 34.29163460919516 23.71496795274601 51 18.790327277408757 23.172111072625114 30.888280605817243 27.149281044148886 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 111.0 1 233.5 2 356.0 3 4303.0 4 8250.0 5 5677.5 6 3105.0 7 2936.5 8 2768.0 9 2777.0 10 2786.0 11 2749.0 12 2712.0 13 2556.0 14 2400.0 15 2378.0 16 2356.0 17 2235.0 18 2114.0 19 1885.0 20 1656.0 21 1761.5 22 1867.0 23 1901.0 24 1935.0 25 2163.0 26 2868.0 27 3345.0 28 3648.5 29 3952.0 30 4690.5 31 5429.0 32 6550.0 33 7671.0 34 8759.0 35 9847.0 36 10440.0 37 11033.0 38 12237.5 39 13442.0 40 14944.5 41 16447.0 42 19041.5 43 21636.0 44 24294.5 45 26953.0 46 33782.5 47 40612.0 48 37249.5 49 33887.0 50 31195.0 51 28503.0 52 24224.5 53 19946.0 54 16376.5 55 12807.0 56 11053.5 57 9300.0 58 8108.5 59 6917.0 60 6461.0 61 6005.0 62 5083.0 63 4161.0 64 3675.5 65 3190.0 66 2729.0 67 2268.0 68 1881.5 69 1495.0 70 1246.5 71 998.0 72 801.5 73 605.0 74 515.5 75 308.5 76 191.0 77 224.0 78 257.0 79 161.5 80 66.0 81 46.5 82 27.0 83 17.0 84 7.0 85 4.5 86 2.0 87 2.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 326237.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.934409131528845 #Duplication Level Percentage of deduplicated Percentage of total 1 79.46454936203179 33.3229892440001 2 9.096237815989637 7.628907162667876 3 3.058342541935501 3.8474936225364957 4 1.649158897754618 2.766260157653732 5 1.0742385159486116 2.2523778716317726 6 0.7519457088170612 1.891943939893926 7 0.5766641889638231 1.6927450422057153 8 0.41283973308230365 1.3849752218259588 9 0.3002881075506238 1.1333163923424356 >10 3.4097064318435772 32.76038256014834 >50 0.17607416934703662 4.446990215343068 >100 0.024840339243980266 2.3348613455824676 >500 0.0014611964261164864 0.3627444998254353 >1k 0.0036529910652912155 4.174012724342678 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4880 1.4958450451665506 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGC 2589 0.7935948405606966 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCG 2556 0.7834794949683819 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTC 2353 0.7212547932944455 No Hit GCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGC 1246 0.3819309275158857 No Hit CCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGC 594 0.18207622066166623 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCT 590 0.18085011816562807 No Hit TCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGC 496 0.15203670950873138 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 457 0.14008221017235936 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTC 443 0.13579085143622582 No Hit GAACTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCT 440 0.1348712745641972 No Hit CTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGCT 425 0.13027339020405412 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTATGCGTCGTA 408 0.12506245459589194 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 328 0.10054040467512883 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1606194269809985 0.0 2 0.0 0.0 0.0 1.1359839625793517 0.0 3 0.0 0.0 0.0 1.5310954919276476 0.0 4 0.0 0.0 0.0 2.1941104166602807 0.0 5 0.0 0.0 0.0 4.245073366908107 0.0 6 0.0 0.0 0.0 5.101505960390758 0.0 7 0.0 0.0 0.0 5.9683604250897355 0.0 8 0.0 0.0 0.0 7.398302461094235 0.0 9 0.0 0.0 0.0 7.848588602764248 0.0 10 0.0 0.0 0.0 9.811885224545346 0.0 11 0.0 0.0 0.0 11.531187449614851 0.0 12 3.0652562400953907E-4 0.0 0.0 13.669816728329405 0.0 13 3.0652562400953907E-4 0.0 0.0 14.222788954042613 0.0 14 3.0652562400953907E-4 0.0 0.0 14.471994286362369 0.0 15 3.0652562400953907E-4 0.0 0.0 14.978068091602118 0.0 16 3.0652562400953907E-4 0.0 0.0 15.86729892685379 0.0 17 3.0652562400953907E-4 0.0 0.0 16.989795761976723 0.0 18 3.0652562400953907E-4 0.0 0.0 18.16930636316543 0.0 19 3.0652562400953907E-4 0.0 0.0 18.948494499397675 0.0 20 3.0652562400953907E-4 0.0 0.0 19.62438350033871 0.0 21 3.0652562400953907E-4 0.0 0.0 20.431158942731816 0.0 22 3.0652562400953907E-4 0.0 0.0 21.259391178805593 0.0 23 3.0652562400953907E-4 0.0 0.0 22.150767693425333 0.0 24 3.0652562400953907E-4 0.0 0.0 22.787727940117154 0.0 25 3.0652562400953907E-4 0.0 0.0 23.357252549526876 0.0 26 3.0652562400953907E-4 0.0 0.0 23.924938005192544 0.0 27 3.0652562400953907E-4 0.0 0.0 24.45982521908919 0.0 28 3.0652562400953907E-4 0.0 0.0 25.0063604066982 0.0 29 3.0652562400953907E-4 0.0 0.0 25.593663502300476 0.0 30 3.0652562400953907E-4 0.0 0.0 26.20855390406361 0.0 31 3.0652562400953907E-4 0.0 0.0 26.84612720200345 0.0 32 3.0652562400953907E-4 0.0 0.0 27.38070789027609 0.0 33 3.0652562400953907E-4 0.0 0.0 27.91620815542075 0.0 34 3.0652562400953907E-4 0.0 0.0 28.445271382461218 0.0 35 3.0652562400953907E-4 0.0 0.0 29.005906748774663 0.0 36 3.0652562400953907E-4 0.0 0.0 29.538648283303242 0.0 37 3.0652562400953907E-4 0.0 0.0 30.07230939470385 0.0 38 3.0652562400953907E-4 0.0 0.0 30.609955339216583 0.0 39 3.0652562400953907E-4 0.0 0.0 31.145149078737237 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGCTA 25 3.8846425E-5 45.000004 40 ACTTGCG 30 2.1607048E-6 45.000004 1 GTCTACG 25 3.8846425E-5 45.000004 1 TCGATCA 25 3.8846425E-5 45.000004 17 ACGGCTC 25 3.8846425E-5 45.000004 29 AGTTCGG 25 3.8846425E-5 45.000004 2 CTCGATC 25 3.8846425E-5 45.000004 16 TGATCGG 35 1.2083547E-7 45.0 2 ACCGCGT 20 7.025851E-4 45.0 44 TAGCGTG 20 7.025851E-4 45.0 1 CCTACCT 20 7.025851E-4 45.0 19 GCGTTTG 20 7.025851E-4 45.0 1 TACGCGG 20 7.025851E-4 45.0 2 TGACCGG 40 6.7884685E-9 45.0 2 AGTTGCG 20 7.025851E-4 45.0 1 CTACGAA 45 3.8380676E-10 45.0 11 TACGAAT 45 3.8380676E-10 45.0 12 ACGGAGC 35 1.2083547E-7 45.0 21 AGCGCCC 20 7.025851E-4 45.0 32 TCGTCAT 20 7.025851E-4 45.0 2 >>END_MODULE