##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936746.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 462004 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.073871654790867 31.0 31.0 33.0 28.0 34.0 2 31.139293166292934 31.0 31.0 34.0 28.0 34.0 3 30.8974208015515 31.0 31.0 34.0 27.0 34.0 4 34.87350975316231 35.0 35.0 37.0 32.0 37.0 5 35.130317053532 35.0 35.0 37.0 33.0 37.0 6 35.102074873810615 36.0 35.0 37.0 32.0 37.0 7 31.018839663725856 35.0 35.0 37.0 0.0 37.0 8 33.07763569146587 35.0 35.0 37.0 17.0 37.0 9 36.35610514194682 39.0 35.0 39.0 32.0 39.0 10 36.075302378334385 37.0 35.0 39.0 32.0 39.0 11 36.322795906528945 37.0 35.0 39.0 32.0 39.0 12 36.35042553744123 38.0 35.0 39.0 32.0 39.0 13 36.25973584644289 38.0 35.0 39.0 32.0 39.0 14 37.19851559726756 39.0 36.0 40.0 32.0 41.0 15 37.448351096527304 39.0 36.0 41.0 32.0 41.0 16 37.37708980874624 39.0 36.0 40.0 32.0 41.0 17 37.323780746487046 39.0 36.0 40.0 32.0 41.0 18 37.263224993723 39.0 36.0 40.0 32.0 41.0 19 37.02957333702739 39.0 35.0 40.0 32.0 41.0 20 37.039454203859705 39.0 35.0 40.0 32.0 41.0 21 36.989634288880616 39.0 35.0 40.0 31.0 41.0 22 37.07018337503571 39.0 35.0 40.0 32.0 41.0 23 37.12999021653492 39.0 35.0 40.0 32.0 41.0 24 37.09865066103324 39.0 35.0 40.0 32.0 41.0 25 36.77424437883655 39.0 35.0 40.0 31.0 41.0 26 36.785770253071405 39.0 35.0 40.0 31.0 41.0 27 36.78784382819197 39.0 35.0 40.0 31.0 41.0 28 36.787114397277946 39.0 35.0 40.0 31.0 41.0 29 36.771668643561526 39.0 35.0 40.0 31.0 41.0 30 36.534800564497274 38.0 35.0 40.0 31.0 41.0 31 36.48443952866209 38.0 35.0 40.0 30.0 41.0 32 36.33381096267565 38.0 35.0 40.0 30.0 41.0 33 36.17853525077705 38.0 35.0 40.0 30.0 41.0 34 36.10804019012822 38.0 35.0 40.0 30.0 41.0 35 36.03673994164553 38.0 35.0 40.0 30.0 41.0 36 35.90867827984173 38.0 35.0 40.0 29.0 41.0 37 35.80680253850616 38.0 35.0 40.0 29.0 41.0 38 35.660829776365574 38.0 35.0 40.0 28.0 41.0 39 35.60776097176648 38.0 35.0 40.0 28.0 41.0 40 35.504958831525265 38.0 34.0 40.0 27.0 41.0 41 35.35516575614064 38.0 34.0 40.0 27.0 41.0 42 35.33678712738418 38.0 34.0 40.0 27.0 41.0 43 35.27749110397313 38.0 34.0 40.0 27.0 41.0 44 35.07353183089324 38.0 34.0 40.0 26.0 41.0 45 34.982365953541525 38.0 34.0 40.0 26.0 41.0 46 34.89383858148414 37.0 34.0 40.0 26.0 41.0 47 34.86586912667423 37.0 34.0 40.0 26.0 41.0 48 34.77128552999541 37.0 34.0 40.0 26.0 41.0 49 34.66176916217176 37.0 34.0 40.0 26.0 41.0 50 34.49290698781829 37.0 33.0 40.0 24.0 41.0 51 32.80130907957507 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 13.0 9 30.0 10 42.0 11 27.0 12 20.0 13 16.0 14 31.0 15 42.0 16 68.0 17 132.0 18 213.0 19 467.0 20 753.0 21 1192.0 22 1728.0 23 2538.0 24 3466.0 25 4736.0 26 5980.0 27 7040.0 28 7888.0 29 9111.0 30 10856.0 31 13947.0 32 17979.0 33 24897.0 34 37762.0 35 41686.0 36 48185.0 37 69110.0 38 87301.0 39 64743.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.75569908485641 21.123843083609668 24.39978874641778 12.720669085116146 2 34.931082847767556 22.29309702946295 25.01861455744972 17.75720556531978 3 33.08088241660245 22.097644176240898 28.160578696288347 16.660894710868305 4 29.161219383381965 25.75735275019264 26.02812962658332 19.05329823984208 5 25.37878459926754 29.91748989186241 26.22812789499658 18.475597613873475 6 26.001073583778496 33.89754201262327 26.166873014086455 13.934511389511778 7 69.63229755586532 17.660020259564853 9.088233002311668 3.6194491822581623 8 80.61099038103566 5.145842893135125 9.879568142267168 4.363598583562047 9 74.46515614583423 7.5995013030190215 12.111150552809066 5.824191998337676 10 42.393788798365385 24.16169556973533 18.784902295218224 14.659613336681069 11 30.867914563510272 26.250422074267753 24.73788105730686 18.14378230491511 12 28.635466359598617 23.307806858815074 29.64000311685613 18.416723664730174 13 24.634418749621215 25.477917940104415 31.140206578298024 18.747456731976346 14 20.398091791413062 27.74543077549112 31.08674383771569 20.769733595380128 15 20.02580064241868 25.381381979376798 34.62654002995645 19.966277348248067 16 22.88681483277201 25.029869871256526 32.29495848520792 19.788356810763545 17 23.330966831456003 24.25476835698392 28.979186327391105 23.435078484168965 18 25.894797447641142 23.557371797646773 30.870511943619533 19.677318811092544 19 24.95714322819716 25.843066293798323 27.936987558549276 21.262802919455243 20 26.65712850970987 25.648695682288462 28.326378126596307 19.367797681405357 21 25.119046588341227 26.088735162466126 29.43762391667605 19.3545943325166 22 24.208015515017188 23.27663829750392 29.51208214647492 23.003264041003973 23 21.614531475917957 25.814711560938868 29.889351607345393 22.681405355797786 24 22.667336213539276 24.840477571622756 31.336092328204952 21.156093886633016 25 22.51798685725665 26.01774010614627 29.321607605128957 22.142665431468124 26 22.230759906840632 26.719249183989753 28.422264742296605 22.627726166873014 27 21.79569873853906 26.325746097436387 29.200829430048223 22.677725733976327 28 20.33640401381806 27.38829101046744 30.738045558047116 21.53725941766738 29 21.222327079419227 25.961679985454673 30.145193548107805 22.670799387018295 30 22.583787153357978 25.613198154128536 30.18978190665016 21.613232785863325 31 24.372949151955396 26.324447407381758 27.53136336481935 21.771240075843497 32 24.59978701483104 26.272499805196492 27.185695361944916 21.942017818027548 33 22.96841585787136 26.832018770400257 27.46642886208777 22.73313650964061 34 21.44656756218561 26.234837793612176 29.9774460827179 22.341148561484317 35 22.9904935888001 25.93765421944399 28.285252941532974 22.78659925022294 36 24.869914546194405 26.979203643258497 27.747162362230632 20.403719448316465 37 22.309330655145843 27.882875472939627 28.59823724469918 21.20955662721535 38 22.087904000831163 28.194561086051202 27.075739603986115 22.641795309131524 39 22.08920269088579 25.933758149280095 28.427243054172692 23.54979610566142 40 24.295893542047256 24.918182526558212 29.41359815066536 21.37232578072917 41 21.42643786633882 24.58896459770911 28.339797923827497 25.64479961212457 42 23.045904364464377 24.99826841326049 28.521830979818358 23.433996242456775 43 23.129669872988114 25.175972502402576 28.46252413399018 23.231833490619128 44 21.82297122968632 26.445009134120053 28.21317564350092 23.5188439926927 45 22.13119366931888 25.872070371685098 27.79910996441589 24.197625994580132 46 22.96755006450161 26.572064311131506 27.548246335529562 22.912139288837327 47 20.854797793958493 26.011896000900425 30.293893559363124 22.83941264577796 48 21.527086345572766 25.91730807525476 29.441087090155065 23.11451848901741 49 22.59893853732868 24.417321062155306 29.909914199877058 23.073826200638955 50 20.86778469450481 25.675102380065972 29.930260344066284 23.52685258136293 51 20.835100994796584 25.659085202725517 27.823785075453895 25.682028727024008 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 216.0 1 510.0 2 804.0 3 2610.5 4 4417.0 5 3004.0 6 1591.0 7 1564.0 8 1537.0 9 1529.5 10 1522.0 11 1545.0 12 1568.0 13 1519.0 14 1470.0 15 1419.0 16 1368.0 17 1361.5 18 1355.0 19 1470.5 20 1586.0 21 1834.5 22 2083.0 23 2308.5 24 2534.0 25 2992.5 26 3844.5 27 4238.0 28 5036.5 29 5835.0 30 6921.0 31 8007.0 32 9377.5 33 10748.0 34 11761.0 35 12774.0 36 14273.5 37 15773.0 38 16837.5 39 17902.0 40 19978.0 41 22054.0 42 24176.0 43 26298.0 44 28600.0 45 30902.0 46 32798.0 47 34694.0 48 37460.5 49 40227.0 50 38834.0 51 37441.0 52 34027.0 53 30613.0 54 28424.0 55 26235.0 56 24826.0 57 23417.0 58 22364.5 59 21312.0 60 19743.5 61 18175.0 62 16585.5 63 14996.0 64 12740.0 65 10484.0 66 9514.5 67 8545.0 68 7103.5 69 5662.0 70 4832.5 71 4003.0 72 3192.5 73 2382.0 74 2047.0 75 1377.5 76 1043.0 77 783.5 78 524.0 79 364.0 80 204.0 81 162.0 82 120.0 83 97.0 84 74.0 85 59.5 86 45.0 87 37.5 88 30.0 89 28.5 90 27.0 91 14.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 462004.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.55642882812875 #Duplication Level Percentage of deduplicated Percentage of total 1 74.91817581698888 25.13986434736024 2 9.1356405567029 6.131189442807348 3 3.598001085743903 3.622082020718858 4 2.0498453485638315 2.75141958191012 5 1.4072481430820896 2.3611111078425244 6 1.029372147047181 2.0725231914028095 7 0.7366931408858945 1.730455366521571 8 0.543715394580667 1.4596117552803274 9 0.42660858073959723 1.2883914429351584 >10 5.902259313857783 46.4835170399691 >50 0.22281735521765222 4.50583765633268 >100 0.027691174203349846 1.5427161780518441 >500 6.439807954267406E-4 0.12187868390828409 >1k 0.0012879615908534812 0.7894021849591522 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2498 0.5406879594116067 No Hit GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 1155 0.24999783551657562 No Hit CCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC 564 0.1220768651353668 No Hit CTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGCT 488 0.10562679111003367 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12077817508073523 0.0 2 0.0 0.0 0.0 0.7017255261859204 0.0 3 0.0 0.0 0.0 0.9274811473493736 0.0 4 0.0 0.0 0.0 1.2151409944502645 0.0 5 0.0 0.0 0.0 1.9705457095609562 0.0 6 0.0 0.0 0.0 2.453009064856581 0.0 7 0.0 0.0 0.0 2.873568194214769 0.0 8 0.0 0.0 0.0 3.696937688851179 0.0 9 0.0 0.0 0.0 3.972692877117947 0.0 10 0.0 0.0 0.0 4.65710253590878 0.0 11 0.0 0.0 0.0 5.608609449268838 0.0 12 0.0 0.0 0.0 6.312932355564021 0.0 13 0.0 0.0 0.0 6.66552670539649 0.0 14 0.0 0.0 0.0 6.82721361719812 0.0 15 0.0 0.0 0.0 7.082189764590783 0.0 16 0.0 0.0 0.0 7.621146137262881 0.0 17 0.0 0.0 0.0 8.248196985307487 0.0 18 0.0 0.0 0.0 8.941481026138302 0.0 19 0.0 0.0 0.0 9.362040155496489 0.0 20 0.0 0.0 0.0 9.772426212760063 0.0 21 0.0 0.0 0.0 10.302724651734618 0.0 22 0.0 0.0 0.0 10.825880295408698 0.0 23 2.164483424385936E-4 0.0 0.0 11.341027350412551 0.0 24 2.164483424385936E-4 0.0 0.0 11.751196959333685 0.0 25 2.164483424385936E-4 0.0 0.0 12.121756521588559 0.0 26 2.164483424385936E-4 0.0 0.0 12.4814936667215 0.0 27 2.164483424385936E-4 0.0 0.0 12.859628920961724 0.0 28 2.164483424385936E-4 0.0 0.0 13.211141029081999 0.0 29 2.164483424385936E-4 0.0 0.0 13.583215729733942 0.0 30 2.164483424385936E-4 0.0 0.0 14.0451164924979 0.0 31 2.164483424385936E-4 0.0 0.0 14.466324966883404 0.0 32 2.164483424385936E-4 0.0 0.0 14.828443043783171 0.0 33 6.493450273157808E-4 0.0 0.0 15.240127791101376 0.0 34 6.493450273157808E-4 0.0 0.0 15.653977021843966 0.0 35 6.493450273157808E-4 0.0 0.0 16.128431788469364 0.0 36 6.493450273157808E-4 0.0 0.0 16.521934875022726 0.0 37 6.493450273157808E-4 0.0 0.0 16.945740729517492 0.0 38 6.493450273157808E-4 0.0 0.0 17.39422169505026 0.0 39 6.493450273157808E-4 0.0 0.0 17.95871897213011 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACCTA 20 7.0289004E-4 45.000004 17 ATTCGAT 20 7.0289004E-4 45.000004 16 ACGGGTC 20 7.0289004E-4 45.000004 5 TTTGCGC 45 3.8380676E-10 45.000004 13 CGTCCCA 20 7.0289004E-4 45.000004 23 CCTGCGA 20 7.0289004E-4 45.000004 42 CCGTTAC 35 1.2098099E-7 45.000004 45 CTACTAT 25 3.8871724E-5 45.0 23 CATAGCG 25 3.8871724E-5 45.0 21 TGTTACG 25 3.8871724E-5 45.0 1 TATAGCG 25 3.8871724E-5 45.0 1 CGGCTAC 25 3.8871724E-5 45.0 25 ATACCGG 25 3.8871724E-5 45.0 2 AAGTCGT 25 3.8871724E-5 45.0 18 CGTTTTT 1335 0.0 42.303375 1 TAGCATA 105 0.0 40.714287 30 TCGATCA 50 1.0786607E-9 40.5 17 CCCACGA 50 1.0786607E-9 40.5 39 CCCCACG 50 1.0786607E-9 40.5 38 CTCGATC 50 1.0786607E-9 40.5 16 >>END_MODULE