##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936745.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 258314 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.131096262688047 31.0 31.0 33.0 28.0 34.0 2 31.18902575934715 31.0 31.0 34.0 28.0 34.0 3 30.85800614755685 31.0 31.0 34.0 27.0 34.0 4 34.84397671051511 35.0 35.0 37.0 32.0 37.0 5 35.15634460385422 35.0 35.0 37.0 33.0 37.0 6 35.16124561580092 36.0 35.0 37.0 32.0 37.0 7 31.519716314253195 35.0 35.0 37.0 0.0 37.0 8 33.37254271932609 37.0 35.0 37.0 17.0 37.0 9 36.563504107404164 39.0 35.0 39.0 32.0 39.0 10 36.19182854974953 37.0 35.0 39.0 32.0 39.0 11 36.44472618595972 38.0 35.0 39.0 32.0 39.0 12 36.44735864103378 38.0 35.0 39.0 32.0 39.0 13 36.28128169592047 38.0 35.0 39.0 32.0 39.0 14 37.324229426202216 39.0 36.0 40.0 32.0 41.0 15 37.57172278699567 39.0 36.0 41.0 33.0 41.0 16 37.56455321817633 39.0 36.0 41.0 33.0 41.0 17 37.45258096734982 39.0 36.0 40.0 32.0 41.0 18 37.33339656387188 39.0 36.0 40.0 32.0 41.0 19 37.087335568339306 39.0 36.0 40.0 32.0 41.0 20 37.005404275416744 39.0 35.0 40.0 32.0 41.0 21 36.98167733843307 39.0 35.0 40.0 32.0 41.0 22 37.050264406884644 39.0 35.0 40.0 32.0 41.0 23 37.10969208018148 39.0 35.0 40.0 32.0 41.0 24 37.025503844158656 39.0 35.0 40.0 32.0 41.0 25 36.72331735794421 38.0 35.0 40.0 31.0 41.0 26 36.70265258561286 38.0 35.0 40.0 31.0 41.0 27 36.70032208862082 38.0 35.0 40.0 31.0 41.0 28 36.70814589995122 38.0 35.0 40.0 31.0 41.0 29 36.65219461585512 38.0 35.0 40.0 31.0 41.0 30 36.35620601283709 38.0 35.0 40.0 30.0 41.0 31 36.28472324380405 38.0 35.0 40.0 30.0 41.0 32 35.990085709640205 38.0 35.0 40.0 30.0 41.0 33 35.68324210069915 38.0 35.0 40.0 28.0 41.0 34 35.55398468530548 38.0 35.0 40.0 27.0 41.0 35 35.33063248604412 38.0 35.0 40.0 25.0 41.0 36 35.176889367204254 38.0 35.0 40.0 25.0 41.0 37 35.02311140704724 38.0 34.0 40.0 24.0 41.0 38 34.901600377834725 38.0 34.0 40.0 23.0 41.0 39 34.867664934924164 38.0 34.0 40.0 23.0 41.0 40 34.75119428292698 38.0 34.0 40.0 23.0 41.0 41 34.64686389433015 38.0 34.0 40.0 23.0 41.0 42 34.64127379855525 38.0 34.0 40.0 23.0 41.0 43 34.55861083797239 38.0 34.0 40.0 23.0 41.0 44 34.32174407891171 38.0 34.0 40.0 21.0 41.0 45 34.24128386382465 38.0 33.0 40.0 22.0 41.0 46 34.09646399343435 37.0 33.0 40.0 20.0 41.0 47 34.03087327825824 37.0 33.0 40.0 20.0 41.0 48 33.98235093723143 37.0 33.0 40.0 20.0 41.0 49 33.89488374613842 37.0 33.0 40.0 20.0 41.0 50 33.73862430994836 37.0 33.0 40.0 20.0 41.0 51 32.02032023041724 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 16.0 10 17.0 11 14.0 12 5.0 13 4.0 14 10.0 15 13.0 16 27.0 17 70.0 18 142.0 19 243.0 20 438.0 21 799.0 22 1159.0 23 1786.0 24 2613.0 25 3789.0 26 4836.0 27 5190.0 28 5374.0 29 5489.0 30 6142.0 31 7440.0 32 9894.0 33 13232.0 34 21540.0 35 23470.0 36 23750.0 37 35773.0 38 48523.0 39 36500.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.478696470187444 19.624178325603722 24.481832188731545 16.415293015477285 2 34.3860572791254 23.748616025457387 25.811609126876593 16.053717568540613 3 29.896172874873216 24.094319316800483 31.06219562238206 14.94731218594424 4 27.185518400086718 23.812491773577893 31.236402208165252 17.765587618170134 5 24.69436422338704 29.37897287797022 29.68828634917194 16.238376549470797 6 25.594431583266875 34.051967760167855 28.397221985645377 11.95637867091989 7 66.98475498811524 16.403292117345554 13.265250818770955 3.346702075768251 8 76.86304265351471 6.584234691112368 12.702369983818143 3.8503526715547745 9 72.18656363960142 6.756892773910822 14.48856817671516 6.567975409772603 10 40.82782969564174 22.834225012968712 22.797835192827336 13.540110098562213 11 30.91353933584707 24.548030691329156 28.610528271793246 15.927901701030528 12 28.389866596467865 21.802147773639835 31.753989330814434 18.053996299077866 13 22.565946870862593 26.47978816479169 33.140286627902476 17.813978336443242 14 19.185564855176256 29.436267488405583 32.37184202172549 19.00632563469266 15 18.77288880974318 25.042003143461063 39.44308090153844 16.742027145257325 16 20.674063349257104 23.475305248650866 36.81604558792787 19.034585814164156 17 21.32366035135533 23.29142051921305 32.672638726511146 22.712280402920477 18 22.142044178790155 24.49034895514761 34.45225578172302 18.915351084339214 19 22.63717800816061 25.449646554193734 32.20305519638889 19.710120241256764 20 23.956115425412484 25.07607020912533 32.433395015368895 18.534419350093298 21 22.442840883575805 26.64973636736685 32.957950401449395 17.94947234760795 22 22.148625316475297 23.240707046462834 31.688565079709193 22.92210255735268 23 19.53668790696594 25.97729894624372 33.02414890404701 21.461864242743328 24 21.379793584552136 23.8020393784309 35.187407573728095 19.630759463288864 25 18.345501985955078 26.50572558978607 33.57115758340624 21.577614840852604 26 19.49526545212416 27.25713666313092 33.25913423198123 19.98846365276369 27 20.021369341189406 28.642272582980404 33.002082736514474 18.334275339315717 28 18.50461066763706 26.446882476365975 35.35542014757234 19.69308670842463 29 19.875422934877708 23.732356744117624 35.49478541619889 20.897434904805777 30 19.741864552443925 26.840976485982175 34.61833272683633 18.798826234737568 31 23.512469320284616 25.367963021748725 30.86011598287356 20.259451675093104 32 23.626671415409152 26.29358068087676 29.783519282733415 20.296228620980667 33 21.706140588585985 26.587409122231083 29.85591179726999 21.850538491912943 34 21.597745379654217 26.56805283492184 30.54151149376341 21.292690291660538 35 19.372933716329737 26.685351936015856 30.78965909706791 23.152055250586496 36 23.585636086313556 26.35552080026634 30.72268634297793 19.336156770442177 37 20.766973528341477 26.371392955859925 32.722965073515184 20.13866844228342 38 20.728648079469174 29.319742638803937 27.85485881524037 22.096750466486526 39 20.68490287015028 26.623411816626273 31.422222566333996 21.269462746889445 40 21.307401070015565 26.86304265351471 31.179881849222262 20.649674427247458 41 19.00555138320029 27.09067259227142 30.22522975913036 23.678546265397927 42 22.116106753795766 25.142655837469125 29.60040880478797 23.140828603947135 43 22.509039386173416 25.567719906780123 29.403361799979873 22.51987890706659 44 20.907887299952773 25.889808527605933 30.080831855803403 23.121472316637888 45 19.900198982633537 27.90363665925966 29.348777069767802 22.847387288339 46 22.361931602623166 27.14216031651401 30.343690237462933 20.152217843399896 47 19.89323071920221 26.09343667009918 31.679274061800754 22.334058548897854 48 20.87498161152706 25.2200809867061 30.941025263826194 22.963912137940646 49 21.227266040555293 23.415687883738396 32.85226507274093 22.504781002965384 50 20.14718520869949 25.0946522449422 32.01955759269726 22.73860495366105 51 19.329188507010848 26.31758247714022 28.957780066121074 25.39544894972785 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 109.0 1 192.0 2 275.0 3 2693.5 4 5112.0 5 3549.0 6 1986.0 7 1888.0 8 1790.0 9 1798.5 10 1807.0 11 1797.5 12 1788.0 13 1683.0 14 1578.0 15 1496.5 16 1415.0 17 1351.5 18 1288.0 19 1178.5 20 1069.0 21 1024.0 22 979.0 23 1101.0 24 1223.0 25 1497.0 26 2044.5 27 2318.0 28 2758.0 29 3198.0 30 3852.5 31 4507.0 32 5061.0 33 5615.0 34 6350.5 35 7086.0 36 7365.0 37 7644.0 38 9226.5 39 10809.0 40 11819.5 41 12830.0 42 15463.0 43 18096.0 44 19652.0 45 21208.0 46 23964.0 47 26720.0 48 25990.0 49 25260.0 50 23773.5 51 22287.0 52 19577.0 53 16867.0 54 15179.5 55 13492.0 56 11945.0 57 10398.0 58 9209.0 59 8020.0 60 7150.5 61 6281.0 62 5603.0 63 4925.0 64 4127.5 65 3330.0 66 2757.5 67 2185.0 68 1773.5 69 1362.0 70 1014.5 71 667.0 72 545.0 73 423.0 74 332.5 75 195.0 76 148.0 77 110.0 78 72.0 79 72.0 80 72.0 81 55.0 82 38.0 83 26.5 84 15.0 85 11.5 86 8.0 87 4.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 258314.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.31438481847673 #Duplication Level Percentage of deduplicated Percentage of total 1 76.55170901756155 27.033765107582248 2 8.691982197276973 6.1390400829997605 3 3.408169082019688 3.610721834666336 4 1.8646817653636183 2.634003577041895 5 1.3045098770033545 2.303398189800011 6 0.9120606871149504 1.9325317249548997 7 0.6917191028479972 1.7099344208985963 8 0.5327662186753196 1.505144901166797 9 0.43958694174650853 1.3971368179812167 >10 5.352875402863344 43.176521597745385 >50 0.21486045032996426 4.442267937471449 >100 0.029598123259739973 1.598055080251167 >500 0.0021924535747955536 0.5892053856933809 >1k 0.0032886803621933304 1.9282733417468663 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2837 1.0982757419264926 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGCCG 1127 0.436290715950355 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGC 1017 0.3937068838700187 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGCCGTCTTC 801 0.3100877226940855 No Hit GCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGCCGTCTTCTGC 721 0.2791176629992954 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1262029932562695 0.0 2 0.0 0.0 0.0 0.7963176599022894 0.0 3 0.0 0.0 0.0 1.0088496945577863 0.0 4 0.0 0.0 0.0 1.3746835247024938 0.0 5 0.0 0.0 0.0 2.455151482304482 0.0 6 0.0 0.0 0.0 2.860085012813862 0.0 7 0.0 0.0 0.0 3.390447285087142 0.0 8 0.0 0.0 0.0 4.312967938245701 0.0 9 0.0 0.0 0.0 4.579697577367081 0.0 10 0.0 0.0 0.0 5.756946971515288 0.0 11 0.0 0.0 0.0 6.689145768328468 0.0 12 0.0 0.0 0.0 7.861749653522457 0.0 13 0.0 0.0 0.0 8.1652562385314 0.0 14 0.0 0.0 0.0 8.30423438141177 0.0 15 0.0 0.0 0.0 8.608902343659267 0.0 16 0.0 0.0 0.0 9.14352299914058 0.0 17 0.0 0.0 0.0 9.752858923635575 0.0 18 0.0 0.0 0.0 10.460137661915343 0.0 19 0.0 0.0 0.0 10.901073886819917 0.0 20 0.0 0.0 0.0 11.304846040090743 0.0 21 0.0 0.0 0.0 11.820884659755182 0.0 22 0.0 0.0 0.0 12.325309507034074 0.0 23 0.0 0.0 0.0 12.873092437885674 0.0 24 0.0 0.0 0.0 13.312867285551693 0.0 25 0.0 0.0 0.0 13.700380157482753 0.0 26 0.0 0.0 0.0 14.06931099359694 0.0 27 0.0 0.0 0.0 14.419659793894253 0.0 28 0.0 0.0 0.0 14.781235240830927 0.0 29 0.0 0.0 0.0 15.211331944842323 0.0 30 3.8712574618487576E-4 0.0 0.0 15.667753199594292 0.0 31 3.8712574618487576E-4 0.0 0.0 16.148176250609723 0.0 32 3.8712574618487576E-4 0.0 0.0 16.5685948109665 0.0 33 3.8712574618487576E-4 0.0 0.0 16.972366964237324 0.0 34 3.8712574618487576E-4 0.0 0.0 17.373429237284856 0.0 35 3.8712574618487576E-4 0.0 0.0 17.79384779764163 0.0 36 3.8712574618487576E-4 0.0 0.0 18.24872054940886 0.0 37 3.8712574618487576E-4 0.0 0.0 18.64165318178651 0.0 38 3.8712574618487576E-4 0.0 0.0 19.064007370874208 0.0 39 3.8712574618487576E-4 0.0 0.0 19.44842323683579 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTTT 25 3.8823822E-5 45.000004 1 GGCGAAT 25 3.8823822E-5 45.000004 8 CTTAACG 20 7.023122E-4 45.0 44 GCGAATA 20 7.023122E-4 45.0 9 GGCACCT 20 7.023122E-4 45.0 8 TAGCGTC 20 7.023122E-4 45.0 35 TGGGTCG 20 7.023122E-4 45.0 1 AAGCGTG 20 7.023122E-4 45.0 34 TACGGGT 20 7.023122E-4 45.0 4 CACGAAG 20 7.023122E-4 45.0 1 CGACAAT 35 1.207045E-7 45.0 20 TGCGATA 20 7.023122E-4 45.0 1 CTCATAA 20 7.023122E-4 45.0 11 TTAACGA 20 7.023122E-4 45.0 45 GAGCCGC 20 7.023122E-4 45.0 40 CGTAAGG 20 7.023122E-4 45.0 2 AATAGCG 20 7.023122E-4 45.0 33 CGCGTCG 20 7.023122E-4 45.0 15 CGGAGAC 20 7.023122E-4 45.0 28 TCGCGTC 20 7.023122E-4 45.0 14 >>END_MODULE