##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936743.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 443080 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.110088471607835 31.0 31.0 33.0 28.0 34.0 2 31.154270109235352 31.0 31.0 34.0 28.0 34.0 3 30.9064390177846 31.0 31.0 34.0 27.0 34.0 4 34.878015256838495 35.0 35.0 37.0 32.0 37.0 5 35.14231064367608 35.0 35.0 37.0 33.0 37.0 6 35.13271643946917 36.0 35.0 37.0 32.0 37.0 7 31.09357226685926 35.0 35.0 37.0 0.0 37.0 8 33.10744335108784 36.0 35.0 37.0 17.0 37.0 9 36.335104270109234 39.0 35.0 39.0 32.0 39.0 10 36.1230635551142 37.0 35.0 39.0 32.0 39.0 11 36.36543513586711 38.0 35.0 39.0 32.0 39.0 12 36.36758824591496 38.0 35.0 39.0 32.0 39.0 13 36.2414281845265 38.0 35.0 39.0 32.0 39.0 14 37.28480409858265 39.0 36.0 40.0 32.0 41.0 15 37.50986277873071 39.0 36.0 41.0 32.0 41.0 16 37.437733592127834 39.0 36.0 41.0 32.0 41.0 17 37.33377719599169 39.0 36.0 40.0 32.0 41.0 18 37.25696939604586 39.0 36.0 40.0 32.0 41.0 19 37.05837094881286 39.0 35.0 40.0 32.0 41.0 20 37.052712828383136 39.0 35.0 40.0 32.0 41.0 21 37.03750338539316 39.0 35.0 40.0 32.0 41.0 22 37.13639749029521 39.0 35.0 40.0 32.0 41.0 23 37.20241039992778 39.0 35.0 40.0 32.0 41.0 24 37.11608513135325 39.0 35.0 40.0 32.0 41.0 25 36.78403899972917 38.0 35.0 40.0 31.0 41.0 26 36.77637221269297 39.0 35.0 40.0 31.0 41.0 27 36.80701002076375 39.0 35.0 40.0 31.0 41.0 28 36.810580482079985 39.0 35.0 40.0 31.0 41.0 29 36.812045228852575 39.0 35.0 40.0 31.0 41.0 30 36.55538503204839 38.0 35.0 40.0 31.0 41.0 31 36.526586620926246 38.0 35.0 40.0 31.0 41.0 32 36.32009795070868 38.0 35.0 40.0 30.0 41.0 33 36.15698519454726 38.0 35.0 40.0 30.0 41.0 34 36.07671977972375 38.0 35.0 40.0 30.0 41.0 35 35.95223435948361 38.0 35.0 40.0 29.0 41.0 36 35.88196939604586 38.0 35.0 40.0 29.0 41.0 37 35.84143946917035 38.0 35.0 40.0 29.0 41.0 38 35.67541978875147 38.0 35.0 40.0 28.0 41.0 39 35.66378532093527 38.0 35.0 40.0 28.0 41.0 40 35.480816105443715 38.0 34.0 40.0 27.0 41.0 41 35.30912250609371 38.0 34.0 40.0 26.0 41.0 42 35.312871264782885 38.0 34.0 40.0 27.0 41.0 43 35.26351223255394 38.0 34.0 40.0 27.0 41.0 44 35.0695292046583 38.0 34.0 40.0 26.0 41.0 45 34.95067933556017 38.0 34.0 40.0 25.0 41.0 46 34.80726505371491 37.0 34.0 40.0 24.0 41.0 47 34.72990882007764 37.0 34.0 40.0 24.0 41.0 48 34.655989888959105 37.0 34.0 40.0 24.0 41.0 49 34.556890403538866 37.0 34.0 40.0 24.0 41.0 50 34.412530468538414 37.0 33.0 40.0 24.0 41.0 51 32.75373973097409 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 23.0 9 36.0 10 36.0 11 18.0 12 24.0 13 18.0 14 18.0 15 32.0 16 58.0 17 113.0 18 234.0 19 383.0 20 659.0 21 939.0 22 1487.0 23 2184.0 24 3244.0 25 4559.0 26 6017.0 27 6983.0 28 7828.0 29 8873.0 30 10882.0 31 13397.0 32 17299.0 33 24167.0 34 37421.0 35 40295.0 36 43754.0 37 64028.0 38 84157.0 39 63910.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.138394872257834 20.880653606572178 25.03204838855286 12.948903132617135 2 34.3964972465469 23.878983479281395 24.458562787758417 17.265956486413288 3 32.32373386295929 23.14841563600253 28.12291234088652 16.404938160151666 4 28.81646655231561 25.235171977972374 27.231425476211975 18.716935993500044 5 25.320709578405705 29.247991333393518 26.416222804008306 19.01507628419247 6 25.95264963437754 34.73887334115736 25.738467093978514 13.570009930486593 7 67.75932111582559 18.058589870903674 10.558589870903674 3.623499142367067 8 78.05520447774668 6.6741897625710935 10.691748668412025 4.5788570912702 9 71.44556287803557 8.573846709397852 13.186557732237972 6.794032680328608 10 41.21513045048298 25.608467996750022 20.367879389726458 12.808522163040534 11 32.979597363907196 24.263112756161416 25.662859980139025 17.094429899792363 12 29.971562697481268 22.33953236435858 29.89121603322199 17.797688904938163 13 24.762345400379164 25.562200956937797 30.456350997562513 19.21910264512052 14 19.888282025819265 29.16583912611718 30.611176311275617 20.334702536787937 15 19.51430892841022 25.784508440913605 36.06098221540128 18.640200415274894 16 22.4435767807168 24.40123679696669 34.01281935542114 19.142367066895368 17 21.771463392615328 25.1816827660919 29.359257921819985 23.68759591947278 18 23.479507086756342 25.744109415906834 30.97589600072222 19.800487496614608 19 25.117585988986185 26.205199963889143 28.244786494538232 20.43242755258644 20 26.753859348198972 25.306716620023472 28.958427372032137 18.98099665974542 21 24.262435677530018 26.525458156540584 29.95982666787036 19.252279498059043 22 22.5130901868737 24.88241401101381 29.81132075471698 22.793175047395504 23 21.99580211248533 26.509885348018415 30.193870181457072 21.30044235803918 24 23.47183352893383 24.343910806174957 31.272682134151847 20.911573530739368 25 21.459781529294936 25.79737293491017 30.479597363907196 22.263248171887696 26 20.236751828112304 27.281754987812583 29.26266137040715 23.21883181366796 27 21.11650266317595 26.576013361018326 29.954184345942043 22.35329962986368 28 18.752144082332762 28.19919653335741 31.52839216394331 21.520267220366527 29 21.60377358490566 26.14223165116909 30.155502392344495 22.098492371580754 30 21.243342060124583 26.779814029069243 30.321386657037102 21.655457253769068 31 24.276880021666518 26.722036652523247 27.57741265685655 21.423670668953687 32 25.081475128644943 26.754762119707504 28.084544551773945 20.079218199873612 33 22.916629051187147 27.904441635821975 27.893382684842464 21.285546628148417 34 21.665387740362917 26.80418885979958 29.86210165207186 21.66832174776564 35 20.879976527940777 26.36408774939063 29.799584725106076 22.956350997562517 36 22.148821883181366 28.76433149769793 28.303918028347024 20.782928590773675 37 22.47968764105805 28.046402455538505 28.963166922451926 20.51074298095152 38 21.028256748217025 29.81177214047125 27.145436490024377 22.014534621287353 39 24.357000993048658 26.161189852848242 27.78482441094159 21.696984743161508 40 23.36733772682134 24.713370046041348 30.0406247178839 21.878667509253408 41 19.620158887785504 26.42863591225061 29.61022840119166 24.340976798772232 42 21.546898979868196 25.875011284643858 28.864087749390627 23.71400198609732 43 22.358264873160604 25.563555114200597 28.91577141825404 23.16240859438476 44 21.591134783786224 26.827435226144264 27.990656314886703 23.59077367518281 45 21.608287442448315 26.78590773675183 26.990385483434142 24.61541933736571 46 22.47675363365532 27.07547169811321 27.86155998916674 22.586214679064728 47 20.911573530739368 26.63266227317866 30.04920104721495 22.406563148867022 48 21.406518010291595 24.689220908188137 30.98424663717613 22.920014444344137 49 21.886341067075925 24.472781439017783 30.831452559357224 22.809424934549067 50 20.065450934368513 25.688588968132166 29.77114742258734 24.47481267491198 51 19.737519183894555 25.9124763022479 28.710842285817463 25.639162228040085 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 149.0 1 490.0 2 831.0 3 3390.5 4 5950.0 5 4066.5 6 2183.0 7 2018.0 8 1853.0 9 1797.0 10 1741.0 11 1658.5 12 1576.0 13 1599.5 14 1623.0 15 1603.0 16 1583.0 17 1445.0 18 1307.0 19 1367.5 20 1428.0 21 1661.5 22 1895.0 23 2061.5 24 2228.0 25 3046.0 26 4386.0 27 4908.0 28 5607.5 29 6307.0 30 7809.5 31 9312.0 32 10374.0 33 11436.0 34 12096.0 35 12756.0 36 13428.0 37 14100.0 38 15897.5 39 17695.0 40 19585.0 41 21475.0 42 24169.5 43 26864.0 44 28236.5 45 29609.0 46 33543.0 47 37477.0 48 37211.0 49 36945.0 50 35562.5 51 34180.0 52 30809.5 53 27439.0 54 25731.5 55 24024.0 56 22642.5 57 21261.0 58 20294.5 59 19328.0 60 18682.5 61 18037.0 62 16373.5 63 14710.0 64 11996.5 65 9283.0 66 7724.5 67 6166.0 68 5275.0 69 4384.0 70 3530.0 71 2676.0 72 2322.5 73 1969.0 74 1622.5 75 926.5 76 577.0 77 457.5 78 338.0 79 247.0 80 156.0 81 112.0 82 68.0 83 48.0 84 28.0 85 25.5 86 23.0 87 33.5 88 44.0 89 28.0 90 12.0 91 7.5 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 443080.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.78558067040211 #Duplication Level Percentage of deduplicated Percentage of total 1 74.89842135433133 24.555882353981982 2 9.105648180975967 5.970679259873757 3 3.5992954381762523 3.540149728348135 4 1.9937787618736484 2.614687777453718 5 1.3493675509533176 2.211989934790146 6 0.9801459284224693 1.9280792043036625 7 0.6896671269450207 1.5827796058326304 8 0.5622727391993854 1.4747550599831536 9 0.4704649219167157 1.388201908508542 >10 6.043792559798879 46.052099170233376 >50 0.2720234255062676 5.341584672138601 >100 0.031678677400729896 1.7362746694034086 >500 0.0013773338000317346 0.39692729113279485 >1k 0.002066000700047602 1.2059093640160734 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3175 0.7165748848966327 No Hit GCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 1137 0.256612801299991 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCG 1029 0.23223797056964882 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGC 993 0.22411302699286811 No Hit GAATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTC 765 0.17265505100659023 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1166832174776564 0.0 2 0.0 0.0 0.0 0.7294393788932021 0.0 3 0.0 0.0 0.0 0.9312088110499233 0.0 4 0.0 0.0 0.0 1.2478559176672384 0.0 5 0.0 0.0 0.0 2.2144985104270107 0.0 6 0.0 0.0 0.0 2.638349733682405 0.0 7 0.0 0.0 0.0 3.1025999819445698 0.0 8 0.0 0.0 0.0 3.941049020492913 0.0 9 0.0 0.0 0.0 4.218651259366254 0.0 10 0.0 0.0 0.0 5.11374921007493 0.0 11 0.0 0.0 0.0 6.049923264421775 0.0 12 0.0 0.0 0.0 7.01521169991875 0.0 13 0.0 0.0 0.0 7.355330865757876 0.0 14 0.0 0.0 0.0 7.502708314525593 0.0 15 0.0 0.0 0.0 7.811230477566128 0.0 16 0.0 0.0 0.0 8.37929944930938 0.0 17 0.0 0.0 0.0 9.030649092714635 0.0 18 0.0 0.0 0.0 9.775209894375733 0.0 19 0.0 0.0 0.0 10.203123589419517 0.0 20 0.0 0.0 0.0 10.617270018958202 0.0 21 0.0 0.0 0.0 11.137943486503566 0.0 22 0.0 0.0 0.0 11.704206915229756 0.0 23 0.0 0.0 0.0 12.246546898979869 0.0 24 0.0 0.0 0.0 12.652794077818903 0.0 25 0.0 0.0 0.0 13.02586440371942 0.0 26 0.0 0.0 0.0 13.389229935903224 0.0 27 0.0 0.0 0.0 13.773359212783244 0.0 28 2.2569287713279768E-4 0.0 0.0 14.175092534079624 0.0 29 2.2569287713279768E-4 0.0 0.0 14.548614245734404 0.0 30 2.2569287713279768E-4 0.0 0.0 15.004513857542657 0.0 31 2.2569287713279768E-4 0.0 0.0 15.411212422135957 0.0 32 2.2569287713279768E-4 0.0 0.0 15.798952785050103 0.0 33 2.2569287713279768E-4 0.0 0.0 16.209036742800397 0.0 34 2.2569287713279768E-4 0.0 0.0 16.591360476663358 0.0 35 2.2569287713279768E-4 0.0 0.0 17.016114471427283 0.0 36 2.2569287713279768E-4 0.0 0.0 17.426198429177575 0.0 37 2.2569287713279768E-4 0.0 0.0 17.831994222262345 0.0 38 2.2569287713279768E-4 0.0 0.0 18.279543197616682 0.0 39 2.2569287713279768E-4 0.0 0.0 18.70046041346935 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 25 3.8869126E-5 45.0 25 AAACTCG 20 7.0285884E-4 45.0 42 CGGGTAC 35 1.2096643E-7 45.0 6 CCGGGTA 35 1.2096643E-7 45.0 5 CGAACAC 25 3.8869126E-5 45.0 32 TCCGCAA 25 3.8869126E-5 45.0 33 CCTACGA 20 7.0285884E-4 45.0 27 TACGGGT 20 7.0285884E-4 45.0 4 CTGACGT 20 7.0285884E-4 45.0 38 ATCCGTA 25 3.8869126E-5 45.0 34 CTTGCGA 25 3.8869126E-5 45.0 42 ACAATCC 20 7.0285884E-4 45.0 24 ATCCATA 25 3.8869126E-5 45.0 29 CGAATGG 20 7.0285884E-4 45.0 2 TAGGGCG 70 0.0 45.0 5 GCGATCT 20 7.0285884E-4 45.0 9 ACGTCTT 20 7.0285884E-4 45.0 41 TATAGCG 35 1.2096643E-7 45.0 1 CGGTCTA 25 3.8869126E-5 45.0 31 CGCAATC 35 1.2096643E-7 45.0 20 >>END_MODULE