##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936738.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 928185 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.098369398341926 31.0 31.0 33.0 28.0 34.0 2 31.168374839067642 31.0 31.0 34.0 28.0 34.0 3 30.860037600262878 31.0 31.0 34.0 27.0 34.0 4 34.81205901840689 35.0 35.0 37.0 32.0 37.0 5 35.11430264440817 35.0 35.0 37.0 33.0 37.0 6 35.1055145256603 36.0 35.0 37.0 32.0 37.0 7 31.012574001950043 35.0 35.0 37.0 0.0 37.0 8 33.08933671627962 36.0 35.0 37.0 17.0 37.0 9 36.45573026928899 39.0 35.0 39.0 32.0 39.0 10 36.170135263982935 37.0 35.0 39.0 32.0 39.0 11 36.37331458707047 38.0 35.0 39.0 32.0 39.0 12 36.48618971433496 38.0 35.0 39.0 32.0 39.0 13 36.52593071424339 39.0 35.0 39.0 32.0 39.0 14 37.57815198478752 39.0 36.0 41.0 33.0 41.0 15 37.75941434089109 40.0 37.0 41.0 33.0 41.0 16 37.65869735020497 39.0 36.0 41.0 33.0 41.0 17 37.55460064534549 39.0 36.0 41.0 32.0 41.0 18 37.418475842639126 39.0 36.0 40.0 32.0 41.0 19 37.18626459164929 39.0 36.0 40.0 32.0 41.0 20 37.13710413333549 39.0 35.0 40.0 32.0 41.0 21 37.127714841330125 39.0 35.0 40.0 32.0 41.0 22 37.2101768505201 39.0 35.0 40.0 32.0 41.0 23 37.259195095805254 39.0 35.0 40.0 32.0 41.0 24 37.191127846280644 39.0 35.0 40.0 32.0 41.0 25 36.85009884882863 39.0 35.0 40.0 31.0 41.0 26 36.856124587232074 39.0 35.0 40.0 31.0 41.0 27 36.89283601868162 39.0 35.0 40.0 31.0 41.0 28 36.902717669430125 39.0 35.0 40.0 31.0 41.0 29 36.88153116027516 39.0 35.0 40.0 31.0 41.0 30 36.61497115337998 39.0 35.0 40.0 31.0 41.0 31 36.549865597914206 39.0 35.0 40.0 30.0 41.0 32 36.36043245689167 39.0 35.0 40.0 30.0 41.0 33 36.13314587070465 39.0 35.0 40.0 30.0 41.0 34 35.947232502141276 39.0 35.0 40.0 29.0 41.0 35 35.80157834914376 39.0 35.0 40.0 27.0 41.0 36 35.7330219729903 39.0 35.0 40.0 27.0 41.0 37 35.66451300117972 38.0 35.0 40.0 27.0 41.0 38 35.50925731400529 38.0 35.0 40.0 26.0 41.0 39 35.4329481730474 38.0 35.0 40.0 26.0 41.0 40 35.32551700361458 38.0 35.0 40.0 25.0 41.0 41 35.15729407391845 38.0 34.0 40.0 24.0 41.0 42 35.175647096214654 38.0 34.0 40.0 24.0 41.0 43 35.14751046397001 38.0 34.0 40.0 24.0 41.0 44 34.93575957379186 38.0 34.0 40.0 24.0 41.0 45 34.85300236483029 38.0 34.0 40.0 23.0 41.0 46 34.76310433803606 38.0 34.0 40.0 23.0 41.0 47 34.72945587355969 38.0 34.0 40.0 23.0 41.0 48 34.64684410974105 38.0 34.0 40.0 23.0 41.0 49 34.5426709115101 38.0 34.0 40.0 23.0 41.0 50 34.381413188103664 37.0 33.0 40.0 23.0 41.0 51 32.82977208207416 36.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 7.0 8 47.0 9 85.0 10 99.0 11 65.0 12 42.0 13 36.0 14 45.0 15 81.0 16 150.0 17 289.0 18 630.0 19 957.0 20 1668.0 21 2476.0 22 3774.0 23 5357.0 24 7861.0 25 11585.0 26 14818.0 27 16356.0 28 17156.0 29 18581.0 30 21656.0 31 26136.0 32 33495.0 33 44900.0 34 66516.0 35 75435.0 36 91730.0 37 137286.0 38 182283.0 39 146580.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.653501187802 21.687486869535707 24.009976459434274 15.64903548322802 2 36.05692830631824 23.017501898867142 24.57581193404332 16.34975786077129 3 31.17481967495704 22.896513087369435 30.368622634496354 15.560044603177166 4 26.740897558137654 25.222773477270156 29.80774306846157 18.22858589613062 5 24.78633031130647 28.968578462267757 28.4850541648486 17.760037061577165 6 25.733986220419418 33.29120811045212 27.413608278522062 13.5611973906064 7 68.20558401611748 17.013526398293443 11.465817697980468 3.3150718876086125 8 80.74026190899444 4.4925311225671605 11.363359675064777 3.403847293373627 9 74.42826591681614 7.102571146915755 13.284420670448242 5.184742265819853 10 37.825648981614655 30.53604615459203 19.414879576808502 12.223425286984813 11 27.15374628980214 25.19917904297096 30.702823251830186 16.944251415396717 12 24.5526484483158 23.293093510453197 33.385585847648905 18.7686721935821 13 22.363429704207675 23.30440591045966 35.305461734460266 19.0267026508724 14 19.190570845251756 25.98070427770326 34.67853929981631 20.150185577228676 15 19.050081610885762 25.843554894767745 36.251286112143596 18.8550773822029 16 23.356658424775233 25.800352300457348 32.76264968729294 18.08033958747448 17 23.514493339151137 25.61730689463846 31.30873694360499 19.559462822605408 18 23.356227476203557 25.47423196884242 31.995884441140504 19.173656113813518 19 22.923878321670788 26.89485393536849 30.47043423455453 19.71083350840619 20 24.039496436594 26.79573576388328 31.28880557216503 17.875962227357693 21 24.000603328000345 26.238519260707726 32.12204463549831 17.63883277579362 22 23.050038516028593 23.579566573474036 32.51905600715374 20.85133890334362 23 21.635018880934297 25.913799511950742 32.936645173106655 19.514536434008306 24 21.512629486578646 25.149619957228353 32.96217887597839 20.375571680214613 25 22.02524281258585 26.97641095255795 30.846113651912066 20.152232582944134 26 21.47578338370045 26.890975398223414 30.79870930902783 20.834531909048305 27 21.12908525778805 25.999127329142357 31.853348201059056 21.018439212010538 28 20.08575876576329 26.549340918028197 31.843867332482212 21.521032983726304 29 21.421914812241095 26.19897972925656 31.15725852066129 21.221846937841054 30 21.698583795256337 25.320167854468668 31.881575332503758 21.09967301777124 31 22.528913955730808 25.868765386210725 30.0319440628754 21.57037659518307 32 22.780695658731826 25.95312356911607 29.965362508551635 21.30081826360047 33 21.623167795213238 25.515387557437364 30.41376449737929 22.447680149970104 34 21.410171463662955 26.13304459779031 31.609754520919857 20.847029417626874 35 20.56982174889704 26.7705252724403 31.15413414351665 21.505518835146013 36 21.45951507511972 27.445390735683077 30.387799845935888 20.707294343261314 37 20.961015314834867 27.54709459859834 29.918604588524918 21.573285498041876 38 20.784326400448187 27.302208072744115 30.50394048600225 21.409525040805445 39 21.660337109520192 26.14457247208261 30.29062094302321 21.904469475373983 40 22.605084115774336 26.052672689172958 31.16404596066517 20.17819723438754 41 20.426208137386404 26.50796985514741 30.771128600440644 22.29469340702554 42 21.12402161207087 26.23388656356222 30.762940577578824 21.879151246788087 43 21.11658774920948 25.57959889461691 30.74893474899939 22.554878607174217 44 21.431395680817943 25.711792368978166 29.828428599901958 23.028383350301933 45 21.0764017949008 25.357337168775622 29.71562781126607 23.850633225057503 46 21.556693978032396 26.490731912280417 29.36752910249573 22.585045007191454 47 20.897665874798665 26.222035477841168 31.138727732079275 21.741570915280896 48 20.669801817525602 26.05224174060128 30.645722566083272 22.632233875789847 49 21.525019258014296 25.139384928651076 31.258746909290714 22.076848904043914 50 20.153094480087482 25.866179694780673 31.039825034879897 22.940900790251945 51 20.140381497223075 25.32189164875537 30.30527319446016 24.2324536595614 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 311.0 1 737.0 2 1163.0 3 9878.0 4 18593.0 5 12386.5 6 6180.0 7 5755.5 8 5331.0 9 5323.5 10 5316.0 11 5117.0 12 4918.0 13 4821.0 14 4724.0 15 4482.0 16 4240.0 17 4164.5 18 4089.0 19 4097.5 20 4106.0 21 4203.0 22 4300.0 23 5080.5 24 5861.0 25 7077.0 26 9640.5 27 10988.0 28 12982.0 29 14976.0 30 17837.0 31 20698.0 32 23101.5 33 25505.0 34 28391.0 35 31277.0 36 34286.5 37 37296.0 38 39866.0 39 42436.0 40 44594.5 41 46753.0 42 49467.0 43 52181.0 44 55237.5 45 58294.0 46 65996.0 47 73698.0 48 74140.0 49 74582.0 50 71501.0 51 68420.0 52 63046.0 53 57672.0 54 52435.5 55 47199.0 56 43930.5 57 40662.0 58 39010.5 59 37359.0 60 34168.5 61 30978.0 62 28099.0 63 25220.0 64 21744.0 65 18268.0 66 15446.0 67 12624.0 68 10950.0 69 9276.0 70 7639.0 71 6002.0 72 4875.0 73 3748.0 74 2998.5 75 1740.0 76 1231.0 77 928.5 78 626.0 79 424.5 80 223.0 81 192.5 82 162.0 83 120.0 84 78.0 85 53.0 86 28.0 87 25.5 88 23.0 89 19.5 90 16.0 91 11.0 92 6.0 93 4.0 94 2.0 95 2.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 928185.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.38844613169605 #Duplication Level Percentage of deduplicated Percentage of total 1 72.86678489021419 25.786422918772285 2 9.28595504348019 6.572310396750999 3 4.207349402754111 4.466746730897621 4 2.4575449234871782 3.4787478456419634 5 1.6540175124157501 2.9266554819503336 6 1.1637338880484884 2.470964040529988 7 0.848897666122336 2.1028818530224953 8 0.6847419115028037 1.938556179946524 9 0.5890905488759528 1.876229924002912 >10 6.138863709309231 42.93814225300792 >50 0.0800941351193972 1.7521671908831769 >100 0.01875793800319217 1.2278456806287603 >500 0.002381960381224467 0.571828585648434 >1k 0.0014887252382652918 0.7248219717478491 >5k 0.0 0.0 >10k+ 2.977450476530584E-4 1.1656789465687534 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11063 1.191896012109655 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTTC 1902 0.20491604583138062 RNA PCR Primer, Index 27 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCG 1444 0.15557243437461282 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGC 1306 0.14070470865183127 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTT 1176 0.12669888007239935 No Hit GCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTTCTGC 1051 0.113231737207561 Illumina PCR Primer Index 6 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08123380576070503 0.0 2 0.0 0.0 0.0 0.3605962173489121 0.0 3 0.0 0.0 0.0 0.5450422060257384 0.0 4 0.0 0.0 0.0 0.8318384804753363 0.0 5 0.0 0.0 0.0 1.5950484009114563 0.0 6 0.0 0.0 0.0 2.2236946298421114 0.0 7 0.0 0.0 0.0 2.7206860701261064 0.0 8 0.0 0.0 0.0 3.4636414076935096 0.0 9 0.0 0.0 0.0 3.832533385047162 0.0 10 0.0 0.0 0.0 4.559974574034271 0.0 11 0.0 0.0 0.0 5.1805405172460235 0.0 12 0.0 0.0 0.0 5.811126014749215 0.0 13 0.0 0.0 0.0 6.063230929178989 0.0 14 0.0 0.0 0.0 6.20231958068704 0.0 15 0.0 0.0 0.0 6.3860114093634355 0.0 16 0.0 0.0 0.0 6.6826117638186355 0.0 17 0.003555325716317329 0.0 0.0 7.034481272591132 0.0 18 0.003555325716317329 0.0 0.0 7.427290895672738 0.0 19 0.003555325716317329 0.0 0.0 7.68704514724974 0.0 20 0.003555325716317329 0.0 0.0 7.939904221679945 0.0 21 0.003555325716317329 0.0 0.0 8.248463398999123 0.0 22 0.003555325716317329 0.0 0.0 8.582987227761707 0.0 23 0.003555325716317329 0.0 0.0 8.92279017652731 0.0 24 0.003555325716317329 0.0 0.0 9.192348508109914 0.0 25 0.003663062859236036 0.0 0.0 9.435618976820354 0.0 26 0.003663062859236036 0.0 0.0 9.679428131245388 0.0 27 0.003663062859236036 0.0 0.0 9.927762245673007 0.0 28 0.003663062859236036 0.0 0.0 10.182560588675749 0.0 29 0.003663062859236036 0.0 0.0 10.469356863125347 0.0 30 0.003663062859236036 0.0 0.0 10.811314554749323 0.0 31 0.003663062859236036 0.0 0.0 11.113624977779214 0.0 32 0.003663062859236036 0.0 0.0 11.419059777953748 0.0 33 0.003663062859236036 0.0 0.0 11.729450486702543 0.0 34 0.003663062859236036 0.0 0.0 12.034131126876646 0.0 35 0.003663062859236036 0.0 0.0 12.363914521350809 0.0 36 0.003663062859236036 0.0 0.0 12.679368875816783 0.0 37 0.003663062859236036 0.0 0.0 12.989220898850983 0.0 38 0.003663062859236036 0.0 0.0 13.345184419054391 0.0 39 0.003663062859236036 0.0 0.0 13.794125093596643 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTA 20 7.0325856E-4 45.0 27 CGATCGG 20 7.0325856E-4 45.0 2 CGTTTTT 5200 0.0 43.182693 1 CGTTTTA 490 0.0 40.408165 1 ACAACGA 260 0.0 38.07692 13 GAAATCG 30 1.1397527E-4 37.499996 23 AGACACG 140 0.0 36.964287 24 GCGAGAC 135 0.0 36.666668 21 CACAACG 270 0.0 36.666668 12 GGGCGAT 1240 0.0 36.290325 7 TCGTTAC 25 0.0021068999 36.0 37 CTATCGT 25 0.0021068999 36.0 34 TCGTAGC 25 0.0021068999 36.0 14 TATAGCG 50 4.8772563E-8 36.0 1 ATACGCC 25 0.0021068999 36.0 28 TCGACGG 25 0.0021068999 36.0 2 AATACCG 25 0.0021068999 36.0 24 AGCGACT 265 0.0 35.660374 19 TCGTCCC 120 0.0 35.625 38 GACACGA 140 0.0 35.357143 25 >>END_MODULE