SRR2936735.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936735.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	430275
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1870	0.43460577537621287	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGC	1083	0.25169949450932544	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCG	1007	0.23403637208761838	No Hit
GCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC	887	0.20614723142176514	TruSeq Adapter, Index 21 (95% over 22bp)
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	762	0.17709604322816802	No Hit
GAATCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC	757	0.17593399570042415	No Hit
CCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC	473	0.1099296961245715	TruSeq Adapter, Index 21 (95% over 22bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGAC	30	2.1623237E-6	45.000004	26
TCGTCAG	30	2.1623237E-6	45.000004	1
CGCGGAT	25	3.8867227E-5	45.0	37
CAGCCCG	20	7.0283614E-4	45.0	13
AGCCCGA	20	7.0283614E-4	45.0	14
TAGCGGC	20	7.0283614E-4	45.0	43
GTTAGCG	25	3.8867227E-5	45.0	1
TTATCCG	20	7.0283614E-4	45.0	21
GTAATCT	20	7.0283614E-4	45.0	19
ATATCCG	20	7.0283614E-4	45.0	31
CCATCCG	20	7.0283614E-4	45.0	29
TGCGAGC	25	3.8867227E-5	45.0	13
TGCGACC	25	3.8867227E-5	45.0	11
CCGAGTT	20	7.0283614E-4	45.0	32
AACCTAT	20	7.0283614E-4	45.0	31
CCGCGGA	25	3.8867227E-5	45.0	36
GGACCGT	20	7.0283614E-4	45.0	8
AATAGCG	25	3.8867227E-5	45.0	1
TAATGCG	25	3.8867227E-5	45.0	1
TACGTTG	20	7.0283614E-4	45.0	1