##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936735.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 430275 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.260868049503223 31.0 31.0 33.0 30.0 34.0 2 31.302494916042065 31.0 31.0 34.0 28.0 34.0 3 31.057735169368428 31.0 31.0 34.0 28.0 34.0 4 35.03480797164604 35.0 35.0 37.0 32.0 37.0 5 35.28467375515659 35.0 35.0 37.0 33.0 37.0 6 35.259359711812216 37.0 35.0 37.0 33.0 37.0 7 30.868909418395212 35.0 35.0 37.0 0.0 37.0 8 33.0422450758236 36.0 35.0 37.0 17.0 37.0 9 36.38930916274476 39.0 35.0 39.0 32.0 39.0 10 36.2563058509093 37.0 35.0 39.0 32.0 39.0 11 36.4857591075475 38.0 35.0 39.0 32.0 39.0 12 36.47180524083435 38.0 35.0 39.0 32.0 39.0 13 36.35045494160711 38.0 35.0 39.0 32.0 39.0 14 37.31182615768985 39.0 36.0 40.0 32.0 41.0 15 37.53551798268549 39.0 36.0 41.0 33.0 41.0 16 37.52688861774447 39.0 36.0 41.0 33.0 41.0 17 37.455522630875606 39.0 36.0 40.0 33.0 41.0 18 37.40237987333682 39.0 36.0 40.0 32.0 41.0 19 37.20251931904015 39.0 36.0 40.0 32.0 41.0 20 37.20490384056708 39.0 35.0 40.0 32.0 41.0 21 37.19283016675382 39.0 35.0 40.0 32.0 41.0 22 37.305304746964154 39.0 35.0 40.0 32.0 41.0 23 37.35647202370577 39.0 35.0 40.0 33.0 41.0 24 37.29120213816745 39.0 35.0 41.0 32.0 41.0 25 36.96989367265121 39.0 35.0 40.0 32.0 41.0 26 36.99531927255825 39.0 35.0 40.0 32.0 41.0 27 37.03749462553019 39.0 35.0 40.0 32.0 41.0 28 37.054507001336354 39.0 35.0 40.0 32.0 41.0 29 37.041327058276686 39.0 35.0 40.0 32.0 41.0 30 36.837127418511415 39.0 35.0 40.0 31.0 41.0 31 36.78385451164953 39.0 35.0 40.0 31.0 41.0 32 36.59879147057114 39.0 35.0 40.0 31.0 41.0 33 36.52428563128232 39.0 35.0 40.0 31.0 41.0 34 36.42615768984952 39.0 35.0 40.0 30.0 41.0 35 36.29501597815351 39.0 35.0 40.0 30.0 41.0 36 36.26312706989716 38.0 35.0 40.0 30.0 41.0 37 36.17672418801929 38.0 35.0 40.0 30.0 41.0 38 36.03965835802684 38.0 35.0 40.0 30.0 41.0 39 36.02342920225437 38.0 35.0 40.0 30.0 41.0 40 35.86213468130847 38.0 35.0 40.0 29.0 41.0 41 35.69224798094242 38.0 35.0 40.0 29.0 41.0 42 35.70215327406891 38.0 35.0 40.0 29.0 41.0 43 35.684301899947705 38.0 35.0 40.0 29.0 41.0 44 35.50659229562489 38.0 34.0 40.0 28.0 41.0 45 35.432904537795594 38.0 34.0 40.0 28.0 41.0 46 35.35829179013422 38.0 34.0 40.0 28.0 41.0 47 35.257902504212424 38.0 34.0 40.0 27.0 41.0 48 35.18612747661379 37.0 34.0 40.0 27.0 41.0 49 35.10365928766487 37.0 34.0 40.0 27.0 41.0 50 34.953622683167744 37.0 34.0 40.0 27.0 41.0 51 33.245601069083726 35.0 31.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 21.0 9 43.0 10 39.0 11 34.0 12 26.0 13 12.0 14 22.0 15 26.0 16 69.0 17 96.0 18 213.0 19 333.0 20 532.0 21 837.0 22 1248.0 23 1797.0 24 2670.0 25 3542.0 26 4568.0 27 5479.0 28 6236.0 29 7448.0 30 9341.0 31 11958.0 32 15929.0 33 23308.0 34 36030.0 35 38761.0 36 44125.0 37 65235.0 38 84973.0 39 65321.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.01528092498983 20.420661205043285 25.16901981291035 11.395038057056533 2 34.501888327232585 23.261402591365986 25.170879088954738 17.06582999244669 3 33.29382371739004 23.709720527569576 27.07245366335483 15.92400209168555 4 29.07512637266864 25.343326942071933 26.050549067456856 19.530997617802566 5 25.641275928185465 29.734007320899426 25.28754866074022 19.337168090174888 6 26.55022950438673 34.17372610539771 26.011039451513568 13.265004938701994 7 68.61402591365987 18.492591947010634 8.927546336645168 3.9658358026843294 8 79.41711696008366 6.4619138922781945 9.76143164255418 4.359537505083958 9 72.69676369763523 8.129916913601766 12.394166521410725 6.779152867352274 10 43.13752832490849 25.256870606007787 18.364999128464355 13.24060194061937 11 33.58689210388705 24.945441868572424 24.061356109464878 17.40630991807565 12 29.69635698100052 23.16564987507989 29.084190343385046 18.05380280053454 13 25.495787577711926 26.326419150543256 29.542501888327234 18.63529138341758 14 20.63122421707048 28.120155714368718 30.15861948753704 21.090000581023762 15 19.47150078438208 25.570623438498636 35.39898901865086 19.55888675846842 16 23.371797106501656 25.476265179245832 31.238858869327757 19.913078844924758 17 23.850328278426588 24.810179536343036 28.856196618441693 22.483295566788684 18 26.36174539538667 23.841031898204637 29.804659810586255 19.992562895822438 19 25.994305967114055 26.179768752541975 26.97042589041892 20.855499389925047 20 26.984370460751844 25.765847423159606 28.431584451804078 18.81819766428447 21 24.85108360931962 27.184010226018245 28.979373656382545 18.985532508279586 22 24.533379815234444 23.51565859043635 29.39980245192028 22.551159142408924 23 22.252745337284292 26.612980070884902 29.662890012201498 21.47138457962931 24 22.984370460751844 24.32909185985707 30.88606123990471 21.800476439486374 25 21.724710940677475 27.192376968218003 29.010981349137175 22.071930741967346 26 21.126256463889373 27.271628609610133 28.721399105223405 22.88071582127709 27 22.712218929754226 26.628783917262215 29.57550403811516 21.0834931148684 28 19.46592295624891 26.98901865086282 31.20330021497879 22.341758177909476 29 21.11905176921736 26.8697925745163 30.908837371448495 21.10231828481785 30 24.061820928475974 25.469757713090463 29.826971123118934 20.641450235314622 31 26.129568299343443 26.117947824066007 27.27046656208239 20.482017314508163 32 24.962407762477483 27.325082795886352 28.46923479170298 19.24327464993318 33 25.91040613561095 25.853465806751498 26.77659636279124 21.45953169484632 34 22.568589855325083 25.794898611353208 30.508395793387947 21.128115739933765 35 21.447446400557784 27.339957004241473 29.527162860961013 21.68543373423973 36 24.951484515716693 28.248910580442736 26.98530009877404 19.814304805066527 37 23.349020974957877 28.710708267968162 28.037882749404453 19.902388007669515 38 23.446632967288362 28.677241299169136 25.979896577770027 21.89622915577247 39 23.849166230898845 26.21927836848527 27.656266341293357 22.275289059322525 40 26.24949160420661 24.431584451804078 28.642844692347918 20.67607925164139 41 21.75701586194875 25.21271279995352 28.630294579048282 24.399976759049444 42 22.993434431468245 25.121840683283946 29.11184707454535 22.772877810702457 43 24.115507524257744 25.211783161931322 28.19568880367207 22.477020510138864 44 22.826564406484227 25.345883446632968 28.057637557376097 23.769914589506712 45 22.668990761722156 26.258555574923015 26.68247051304398 24.389983150310847 46 23.508918714775433 25.998256928708386 27.969554354773113 22.52327000174307 47 21.89646156527802 25.843007379001804 30.838184881761666 21.422346173958516 48 22.747080355586544 25.69310324792284 29.20271919121492 22.357097205275693 49 23.367148916390683 24.131776189646157 30.482830747777584 22.018244146185577 50 21.746092615187962 25.770263203765033 29.5480797164604 22.9355644645866 51 21.52809249898321 25.151589099994187 28.244727209342862 25.07559119167974 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 200.0 1 481.5 2 763.0 3 2169.5 4 3576.0 5 2467.0 6 1358.0 7 1244.5 8 1131.0 9 1156.0 10 1181.0 11 1146.0 12 1111.0 13 1135.0 14 1159.0 15 1290.0 16 1421.0 17 1302.5 18 1184.0 19 1172.0 20 1160.0 21 1274.0 22 1388.0 23 1889.5 24 2391.0 25 2738.0 26 3705.5 27 4326.0 28 4985.0 29 5644.0 30 6741.5 31 7839.0 32 9002.0 33 10165.0 34 11762.5 35 13360.0 36 13259.5 37 13159.0 38 15015.0 39 16871.0 40 18704.0 41 20537.0 42 22981.0 43 25425.0 44 27730.0 45 30035.0 46 33070.5 47 36106.0 48 36084.5 49 36063.0 50 35667.0 51 35271.0 52 32148.5 53 29026.0 54 26603.5 55 24181.0 56 23036.0 57 21891.0 58 20418.0 59 18945.0 60 18129.5 61 17314.0 62 15892.0 63 14470.0 64 12230.5 65 9991.0 66 8307.5 67 6624.0 68 5694.0 69 4764.0 70 3825.0 71 2886.0 72 2402.5 73 1919.0 74 1565.5 75 841.5 76 471.0 77 416.0 78 361.0 79 251.0 80 141.0 81 118.5 82 96.0 83 63.0 84 30.0 85 23.0 86 16.0 87 15.0 88 14.0 89 10.0 90 6.0 91 4.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 430275.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.43843440266331 #Duplication Level Percentage of deduplicated Percentage of total 1 74.01582117757872 24.009573600281453 2 9.2442635000825 5.997388702967219 3 3.6195871328103757 3.5224121931718066 4 2.1015472759585383 2.726836138211073 5 1.4044025327028928 2.2778309716008502 6 1.0589311330110671 2.0610040857070464 7 0.8070249304536221 1.8325037687483618 8 0.6373903741047356 1.6540756671428396 9 0.5096706047461411 1.4879624831121094 >10 6.3397448630347135 46.95072972987472 >50 0.22649535962547465 4.459676502511025 >100 0.030820571088276617 1.5398799580903246 >500 0.002150272401507671 0.5594067913581944 >1k 0.002150272401507671 0.9207194072229634 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1870 0.43460577537621287 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGC 1083 0.25169949450932544 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCG 1007 0.23403637208761838 No Hit GCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 887 0.20614723142176514 TruSeq Adapter, Index 21 (95% over 22bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 762 0.17709604322816802 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC 757 0.17593399570042415 No Hit CCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 473 0.1099296961245715 TruSeq Adapter, Index 21 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10737319156353495 0.0 2 0.0 0.0 0.0 0.6082156760211492 0.0 3 0.0 0.0 0.0 0.8020452036488293 0.0 4 0.0 0.0 0.0 1.0651327639300447 0.0 5 0.0 0.0 0.0 1.9273720295160073 0.0 6 0.0 0.0 0.0 2.332926616698623 0.0 7 0.0 0.0 0.0 2.748474812619836 0.0 8 0.0 0.0 0.0 3.411306722444948 0.0 9 0.0 0.0 0.0 3.662308988437627 0.0 10 0.0 0.0 0.0 4.479228400441578 0.0 11 0.0 0.0 0.0 5.331009238277845 0.0 12 0.0 0.0 0.0 6.28412062053338 0.0 13 0.0 0.0 0.0 6.625995003195631 0.0 14 0.0 0.0 0.0 6.777758410318982 0.0 15 0.0 0.0 0.0 7.079193539015746 0.0 16 0.0 0.0 0.0 7.6295392481552495 0.0 17 0.0 0.0 0.0 8.24310034280402 0.0 18 0.0 0.0 0.0 8.928011155656266 0.0 19 0.0 0.0 0.0 9.334960199872175 0.0 20 0.0 0.0 0.0 9.754459357387717 0.0 21 0.0 0.0 0.0 10.224158968101795 0.0 22 0.0 0.0 0.0 10.77032130614142 0.0 23 0.0 0.0 0.0 11.292545465109523 0.0 24 0.0 0.0 0.0 11.714136308175004 0.0 25 0.0 0.0 0.0 12.083667421997559 0.0 26 0.0 0.0 0.0 12.43507059438731 0.0 27 0.0 0.0 0.0 12.826913020742548 0.0 28 0.0 0.0 0.0 13.197838591598396 0.0 29 0.0 0.0 0.0 13.572947533554123 0.0 30 0.0 0.0 0.0 14.05961303817326 0.0 31 0.0 0.0 0.0 14.470513043983498 0.0 32 0.0 0.0 0.0 14.845854395444773 0.0 33 0.0 0.0 0.0 15.232816222183487 0.0 34 0.0 0.0 0.0 15.638370809366103 0.0 35 0.0 0.0 0.0 16.081575736447622 0.0 36 0.0 0.0 0.0 16.48666550461914 0.0 37 0.0 0.0 0.0 16.880599616524314 0.0 38 0.0 0.0 0.0 17.346813084655164 0.0 39 0.0 0.0 0.0 17.96107140782058 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAC 30 2.1623237E-6 45.000004 26 TCGTCAG 30 2.1623237E-6 45.000004 1 CGCGGAT 25 3.8867227E-5 45.0 37 CAGCCCG 20 7.0283614E-4 45.0 13 AGCCCGA 20 7.0283614E-4 45.0 14 TAGCGGC 20 7.0283614E-4 45.0 43 GTTAGCG 25 3.8867227E-5 45.0 1 TTATCCG 20 7.0283614E-4 45.0 21 GTAATCT 20 7.0283614E-4 45.0 19 ATATCCG 20 7.0283614E-4 45.0 31 CCATCCG 20 7.0283614E-4 45.0 29 TGCGAGC 25 3.8867227E-5 45.0 13 TGCGACC 25 3.8867227E-5 45.0 11 CCGAGTT 20 7.0283614E-4 45.0 32 AACCTAT 20 7.0283614E-4 45.0 31 CCGCGGA 25 3.8867227E-5 45.0 36 GGACCGT 20 7.0283614E-4 45.0 8 AATAGCG 25 3.8867227E-5 45.0 1 TAATGCG 25 3.8867227E-5 45.0 1 TACGTTG 20 7.0283614E-4 45.0 1 >>END_MODULE