##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936734.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 448532 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.083055389582015 31.0 31.0 33.0 28.0 34.0 2 31.117817680789777 31.0 31.0 34.0 28.0 34.0 3 30.875645438898452 31.0 31.0 34.0 27.0 34.0 4 34.84910998546369 35.0 35.0 37.0 32.0 37.0 5 35.13446755192495 35.0 35.0 37.0 33.0 37.0 6 35.11214361517127 36.0 35.0 37.0 32.0 37.0 7 31.234337795296657 35.0 35.0 37.0 0.0 37.0 8 33.183737169254364 36.0 35.0 37.0 17.0 37.0 9 36.382895757716284 39.0 35.0 39.0 32.0 39.0 10 36.11692365316187 37.0 35.0 39.0 32.0 39.0 11 36.357831771200274 38.0 35.0 39.0 32.0 39.0 12 36.36566621779494 38.0 35.0 39.0 32.0 39.0 13 36.29421535141305 38.0 35.0 39.0 32.0 39.0 14 37.32887062684491 39.0 36.0 40.0 32.0 41.0 15 37.52859773661634 39.0 36.0 41.0 33.0 41.0 16 37.46401817484594 39.0 36.0 40.0 33.0 41.0 17 37.335724095493745 39.0 36.0 40.0 32.0 41.0 18 37.2294329055675 39.0 36.0 40.0 32.0 41.0 19 37.05142553931492 39.0 35.0 40.0 32.0 41.0 20 37.000118163252566 39.0 35.0 40.0 32.0 41.0 21 36.99254902660234 39.0 35.0 40.0 32.0 41.0 22 37.079691081126875 39.0 35.0 40.0 32.0 41.0 23 37.15055559023659 39.0 35.0 40.0 32.0 41.0 24 37.06035243862199 39.0 35.0 40.0 32.0 41.0 25 36.73462317069908 38.0 35.0 40.0 31.0 41.0 26 36.7441631812223 38.0 35.0 40.0 31.0 41.0 27 36.742343913031846 38.0 35.0 40.0 31.0 41.0 28 36.7727653768293 39.0 35.0 40.0 31.0 41.0 29 36.77507513399267 39.0 35.0 40.0 31.0 41.0 30 36.48314501529434 38.0 35.0 40.0 31.0 41.0 31 36.44761800718789 38.0 35.0 40.0 30.0 41.0 32 36.27433717103796 38.0 35.0 40.0 30.0 41.0 33 36.06058653563179 38.0 35.0 40.0 30.0 41.0 34 35.932062818260455 38.0 35.0 40.0 29.0 41.0 35 35.828493842133895 38.0 35.0 40.0 29.0 41.0 36 35.746031498310046 38.0 35.0 40.0 29.0 41.0 37 35.691310764895256 38.0 35.0 40.0 28.0 41.0 38 35.58584225874631 38.0 35.0 40.0 27.0 41.0 39 35.54085104295792 38.0 35.0 40.0 27.0 41.0 40 35.41951075954447 38.0 34.0 40.0 27.0 41.0 41 35.2550208234864 38.0 34.0 40.0 26.0 41.0 42 35.28997485129266 38.0 34.0 40.0 26.0 41.0 43 35.17984669990101 38.0 34.0 40.0 26.0 41.0 44 34.97487358761471 38.0 34.0 40.0 25.0 41.0 45 34.90103270223752 38.0 34.0 40.0 24.0 41.0 46 34.76898415274719 38.0 34.0 40.0 24.0 41.0 47 34.73448940097919 38.0 34.0 40.0 24.0 41.0 48 34.65868655971035 37.0 34.0 40.0 24.0 41.0 49 34.51322536630608 37.0 34.0 40.0 24.0 41.0 50 34.3509337126448 37.0 33.0 40.0 23.0 41.0 51 32.693636128525945 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 15.0 9 19.0 10 30.0 11 37.0 12 19.0 13 15.0 14 16.0 15 27.0 16 55.0 17 105.0 18 221.0 19 416.0 20 725.0 21 1163.0 22 1692.0 23 2503.0 24 3613.0 25 4961.0 26 6537.0 27 7641.0 28 8228.0 29 8993.0 30 10650.0 31 13310.0 32 17182.0 33 24005.0 34 37744.0 35 39709.0 36 43218.0 37 63605.0 38 84905.0 39 67167.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.13998555287025 21.95361757912479 23.877449100621583 13.028947767383375 2 35.310301160229365 23.737436793807355 24.001631990582613 16.950630055380664 3 32.63735920736982 22.06687594196178 29.25432299144766 16.041441859220747 4 29.1029402584431 25.055068534686487 27.5159854815264 18.32600572534401 5 25.90428330643076 29.306716131736422 26.43445729624642 18.3545432655864 6 25.335539047381232 34.394424478075145 26.61125627602936 13.658780198514265 7 67.42239126751268 17.367768631892485 11.30933801824619 3.90050208234864 8 76.9146905906379 6.867960368490989 11.617008373984465 4.600340666886644 9 71.41207316311879 8.781313261930029 13.640721286329626 6.1658922886215475 10 40.87066251683269 25.83293945582478 20.757270384275817 12.539127643066717 11 32.62130684098348 24.964996923296443 26.162235916277993 16.25146031944209 12 30.092167337001598 22.472867041816414 30.37419849642835 17.06076712475364 13 24.369721669802825 24.96789526722731 31.46665120883237 19.195731854137495 14 19.268413401942336 28.48826839556598 31.247268868218992 20.996049334272694 15 19.38144881524618 26.41015579713376 36.38937690064477 17.81901848697529 16 21.913486663158928 25.683340319085374 33.86023739666289 18.54293562109281 17 21.82163145550373 24.94961340550953 30.805382893528222 22.423372245458516 18 22.593928638313432 25.912532439157072 32.08511321377293 19.408425708756567 19 24.79154218651066 26.85739256061998 28.826259887811794 19.524805365057567 20 26.417290182194357 25.929476603675994 29.624642165999305 18.028591048130345 21 24.019245003700963 27.57529005734262 29.549508173329887 18.855956765626534 22 22.42961483238654 25.892466981174138 29.920273246947822 21.757644939491495 23 22.387700320155528 26.1408327610962 30.459588167622375 21.011878751125895 24 22.893795760391676 24.21923073493084 32.148876780252024 20.73809672442546 25 21.594891780296614 26.242274798676572 29.567790035047665 22.59504338597915 26 21.00920335672817 26.47258166641399 30.909723275039465 21.608491701818377 27 21.20183175336431 27.837924607385872 30.460034066688664 20.500209572561154 28 18.48965068267147 28.290735109200682 31.389733619897797 21.82988058823005 29 21.182881043047097 26.88169405973264 30.952306635869903 20.983118261350363 30 21.660661892573994 25.96581737757841 31.503883780867366 20.869636948980226 31 23.31896052009667 26.428660608384686 28.558943397572527 21.693435473946117 32 23.982458330732257 27.22057735011103 28.609775891129285 20.18718842802743 33 23.180285910481306 28.14938510518759 27.860665459766526 20.809663524564577 34 21.286552575958908 27.289468755852425 30.615875790356096 20.808102877832575 35 21.070068579276395 26.261894357593214 29.987158106890927 22.680878956239468 36 22.055282566238308 29.72430060731453 28.123077060276636 20.09733976617053 37 21.0098722053276 28.74778165214522 28.921013439397857 21.32133270312932 38 20.7842472777862 29.28397527935577 26.729196579062364 23.20258086379567 39 23.193216983403637 25.731720367777548 28.8226926952815 22.25236995353732 40 22.7254688628682 25.293401585617083 30.92577564142581 21.05535391008891 41 19.459481151846468 26.89707757751955 30.37308374876263 23.27035752187135 42 21.454210624882954 26.775793031489393 28.772974949390456 22.997021394237198 43 22.483791568940454 25.85434261100657 28.18461113142429 23.477254688628683 44 20.219962009399552 26.398339471877147 28.523717371335827 24.857981147387477 45 20.598976215743807 26.337697198862063 27.9427108879634 25.120615697430733 46 21.35633577983288 27.157928531297653 28.70988023151079 22.775855457358674 47 20.718477165508816 26.384070701755952 30.683652448431776 22.213799684303464 48 20.809886474097723 24.47852104197694 31.542008151034935 23.16958433289041 49 20.536773295996717 24.597799042208806 31.125092524056253 23.74033513773822 50 19.51655623233125 25.049271846824755 31.37278945537888 24.061382465465115 51 18.77168184209822 24.44597041013796 30.66113454558426 26.121213202179554 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 182.0 1 516.5 2 851.0 3 4396.5 4 7942.0 5 5307.0 6 2672.0 7 2498.5 8 2325.0 9 2139.0 10 1953.0 11 1911.0 12 1869.0 13 1786.5 14 1704.0 15 1627.5 16 1551.0 17 1552.0 18 1553.0 19 1697.5 20 1842.0 21 1779.0 22 1716.0 23 2097.0 24 2478.0 25 2963.0 26 4066.0 27 4684.0 28 5973.0 29 7262.0 30 8186.0 31 9110.0 32 10348.5 33 11587.0 34 12057.5 35 12528.0 36 13463.0 37 14398.0 38 15600.5 39 16803.0 40 19057.5 41 21312.0 42 24425.5 43 27539.0 44 29344.5 45 31150.0 46 34534.0 47 37918.0 48 38888.0 49 39858.0 50 37697.5 51 35537.0 52 31612.0 53 27687.0 54 25535.5 55 23384.0 56 21638.0 57 19892.0 58 19619.5 59 19347.0 60 18934.5 61 18522.0 62 16867.5 63 15213.0 64 12441.5 65 9670.0 66 7501.5 67 5333.0 68 4183.0 69 3033.0 70 2430.0 71 1827.0 72 1566.0 73 1305.0 74 984.5 75 630.5 76 597.0 77 373.0 78 149.0 79 102.0 80 55.0 81 46.0 82 37.0 83 30.0 84 23.0 85 17.5 86 12.0 87 8.5 88 5.0 89 2.5 90 0.0 91 1.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 448532.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.58893443218689 #Duplication Level Percentage of deduplicated Percentage of total 1 74.72564533479522 25.099548015532886 2 9.678732278814714 6.501966077995965 3 3.7337349992034663 3.7623654022621973 4 1.9864059166764192 2.6688503236380936 5 1.290204215663306 2.166829240202295 6 0.9468533828945249 1.9082277716963123 7 0.6986423242606941 1.6426655854800176 8 0.5709919321346859 1.5343208455823738 9 0.44870040407091794 1.3564231606830441 >10 5.633232148228835 44.065820051538246 >50 0.24313289195240684 5.034125910992395 >100 0.03908675919670846 2.2993247154791323 >500 0.003312437220060039 0.719415155825417 >1k 0.0013249748880240155 1.240117743091571 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4310 0.9609124878492504 No Hit GCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 1263 0.28158526036046483 TruSeq Adapter, Index 27 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG 754 0.1681039479903329 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC 752 0.16765804892404554 No Hit GAATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 641 0.14291065074509735 No Hit TGTTGTGAGGATTAAAATGAGAAAATGAATGTAAAACACTTAGCATGGTGT 562 0.1252976376267468 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 524 0.11682555536728706 No Hit CCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 480 0.10701577590896524 TruSeq Adapter, Index 27 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12016979836444222 0.0 2 0.0 0.0 0.0 0.7854512052651762 0.0 3 0.0 0.0 0.0 1.0264596505934918 0.0 4 0.0 0.0 0.0 1.3664576886376 0.0 5 0.0 0.0 0.0 2.3398553503428965 0.0 6 0.0 0.0 0.0 2.8764948766197285 0.0 7 0.0 0.0 0.0 3.377239528060428 0.0 8 0.0 0.0 0.0 4.2358181801967305 0.0 9 0.0 0.0 0.0 4.539252494805276 0.0 10 0.0 0.0 0.0 5.386014821684963 0.0 11 0.0 0.0 0.0 6.407569582549294 0.0 12 0.0 0.0 0.0 7.371603363862556 0.0 13 0.0 0.0 0.0 7.778932160916055 0.0 14 0.0 0.0 0.0 7.971560557552192 0.0 15 0.0 0.0 0.0 8.298627522673968 0.0 16 0.0 0.0 0.0 8.940722178127759 0.0 17 0.0 0.0 0.0 9.62941328600858 0.0 18 0.0 0.0 0.0 10.454103609107042 0.0 19 0.0 0.0 0.0 10.930100862368795 0.0 20 0.0 0.0 0.0 11.409888257693988 0.0 21 0.0 0.0 0.0 11.979970213942371 0.0 22 0.0 0.0 0.0 12.546484977660457 0.0 23 0.0 0.0 0.0 13.122586571303719 0.0 24 0.0 0.0 0.0 13.606832957291788 0.0 25 2.229495331436776E-4 0.0 0.0 14.024863331936183 0.0 26 2.229495331436776E-4 0.0 0.0 14.42238234953136 0.0 27 2.229495331436776E-4 0.0 0.0 14.790026129685284 0.0 28 2.229495331436776E-4 0.0 0.0 15.218758081920576 0.0 29 2.229495331436776E-4 0.0 0.0 15.61850659484719 0.0 30 2.229495331436776E-4 0.0 0.0 16.06284501440254 0.0 31 2.229495331436776E-4 0.0 0.0 16.524573497543095 0.0 32 2.229495331436776E-4 0.0 0.0 16.97827579749048 0.0 33 2.229495331436776E-4 0.0 0.0 17.379362007615956 0.0 34 2.229495331436776E-4 0.0 0.0 17.80341201965523 0.0 35 2.229495331436776E-4 0.0 0.0 18.24730454014429 0.0 36 2.229495331436776E-4 0.0 0.0 18.69877734476024 0.0 37 2.229495331436776E-4 0.0 0.0 19.152033745641337 0.0 38 2.229495331436776E-4 0.0 0.0 19.610863884851025 0.0 39 2.229495331436776E-4 0.0 0.0 20.07125467079272 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTTGCG 35 1.2097189E-7 45.000004 1 TAATACG 25 3.8869883E-5 45.0 1 GTACCGG 20 7.028681E-4 45.0 2 CGACCGG 20 7.028681E-4 45.0 2 GCACGCT 20 7.028681E-4 45.0 41 CCGCTTG 20 7.028681E-4 45.0 39 ACGGGTA 55 1.8189894E-12 45.0 5 ATCCGGT 20 7.028681E-4 45.0 11 GTTACCG 20 7.028681E-4 45.0 41 CGTACTT 20 7.028681E-4 45.0 35 GTATCCG 20 7.028681E-4 45.0 9 ATGCGAC 20 7.028681E-4 45.0 12 CGGTCAA 20 7.028681E-4 45.0 45 TATCGAG 20 7.028681E-4 45.0 1 TGTCGCT 20 7.028681E-4 45.0 27 TAGTCCG 25 3.8869883E-5 45.0 19 GCGTAAG 55 1.8189894E-12 45.0 1 CGCTTCA 25 3.8869883E-5 45.0 44 TGCAACG 20 7.028681E-4 45.0 1 TGATCCA 30 2.162531E-6 44.999996 38 >>END_MODULE