##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936732.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 304662 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.145817331994145 31.0 31.0 33.0 28.0 34.0 2 31.21165750897716 31.0 31.0 34.0 28.0 34.0 3 30.881068200169366 31.0 31.0 34.0 27.0 34.0 4 34.820814542017054 35.0 35.0 37.0 32.0 37.0 5 35.150166413927565 35.0 35.0 37.0 33.0 37.0 6 35.1834459171147 36.0 35.0 37.0 33.0 37.0 7 30.656127117920843 35.0 35.0 37.0 0.0 37.0 8 32.971286212261454 36.0 35.0 37.0 17.0 37.0 9 36.41838496432111 39.0 35.0 39.0 32.0 39.0 10 36.239478504047106 37.0 35.0 39.0 32.0 39.0 11 36.43378235552842 38.0 35.0 39.0 32.0 39.0 12 36.45990310573685 38.0 35.0 39.0 32.0 39.0 13 36.383424910228385 39.0 35.0 39.0 32.0 39.0 14 37.410415476823495 39.0 36.0 41.0 32.0 41.0 15 37.6605976459158 39.0 36.0 41.0 33.0 41.0 16 37.586305479515005 39.0 36.0 41.0 33.0 41.0 17 37.51951014566963 39.0 36.0 41.0 33.0 41.0 18 37.36878573632419 39.0 36.0 40.0 32.0 41.0 19 37.15071784469346 39.0 36.0 40.0 32.0 41.0 20 37.05151938869961 39.0 35.0 40.0 32.0 41.0 21 37.033059587345974 39.0 35.0 40.0 32.0 41.0 22 37.105251065114786 39.0 35.0 40.0 32.0 41.0 23 37.16662399642883 39.0 35.0 40.0 32.0 41.0 24 37.06892228108527 39.0 35.0 40.0 32.0 41.0 25 36.76199526032127 38.0 35.0 40.0 31.0 41.0 26 36.766081756175694 38.0 35.0 40.0 32.0 41.0 27 36.76621633154118 38.0 35.0 40.0 32.0 41.0 28 36.79369924703442 39.0 35.0 40.0 32.0 41.0 29 36.77251839743716 39.0 35.0 40.0 32.0 41.0 30 36.48015177475366 38.0 35.0 40.0 31.0 41.0 31 36.3920771215314 38.0 35.0 40.0 31.0 41.0 32 36.12361896134077 38.0 35.0 40.0 30.0 41.0 33 35.88812520104247 38.0 35.0 40.0 29.0 41.0 34 35.69571853398192 38.0 35.0 40.0 28.0 41.0 35 35.55172617523682 38.0 35.0 40.0 27.0 41.0 36 35.447213633469225 38.0 35.0 40.0 27.0 41.0 37 35.30632635510828 38.0 35.0 40.0 26.0 41.0 38 35.20941896265369 38.0 34.0 40.0 25.0 41.0 39 35.18749302505728 38.0 34.0 40.0 25.0 41.0 40 35.10451582409359 38.0 34.0 40.0 25.0 41.0 41 35.00432282332552 38.0 34.0 40.0 24.0 41.0 42 34.95534723726622 38.0 34.0 40.0 24.0 41.0 43 34.85086751875849 38.0 34.0 40.0 24.0 41.0 44 34.62661244264135 38.0 34.0 40.0 23.0 41.0 45 34.55770329086003 38.0 34.0 40.0 23.0 41.0 46 34.468483105868145 38.0 34.0 40.0 23.0 41.0 47 34.43307665544111 37.0 33.0 40.0 23.0 41.0 48 34.35306667717011 37.0 33.0 40.0 23.0 41.0 49 34.25246995030558 37.0 33.0 40.0 22.0 41.0 50 34.06343423203419 37.0 33.0 40.0 22.0 41.0 51 32.467957933710146 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 20.0 10 24.0 11 10.0 12 10.0 13 2.0 14 10.0 15 14.0 16 39.0 17 79.0 18 168.0 19 284.0 20 476.0 21 797.0 22 1247.0 23 1840.0 24 2651.0 25 3957.0 26 5114.0 27 5660.0 28 5968.0 29 6232.0 30 7321.0 31 8985.0 32 11318.0 33 15846.0 34 25392.0 35 28325.0 36 28684.0 37 43078.0 38 56373.0 39 44728.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.20693095955518 20.426242852735164 24.268533653688348 17.098292534021308 2 36.464015860199176 22.672338525973046 24.79436227688389 16.069283336943894 3 30.896534520222414 21.79333162652382 31.67575870965201 15.634375143601762 4 26.121078441026448 25.366143463904262 31.145663062672735 17.36711503239656 5 24.01645101784929 28.5903722814135 30.414689065259203 16.978487635478004 6 24.732654548319122 32.754659261739235 29.25208920049104 13.260596989450605 7 65.1285687089299 18.60980365125943 12.676014731079032 3.585612908731644 8 78.09572575509908 4.404881475208592 13.147028510283526 4.3523642594087875 9 72.30176392198567 6.858420150855703 15.732844923226393 5.106971003932227 10 40.14514445516671 25.6510493596182 21.670572634591778 12.533233550623313 11 29.244211618121064 25.971076143398257 28.49354366478261 16.291168573698066 12 26.783123592702733 22.579120467928394 33.28081611753353 17.356939821835347 13 21.900007221117175 25.93595525533214 33.97732569207844 18.186711831472255 14 17.39074777950647 29.11193388082531 34.175906414321446 19.321411925346776 15 17.698301724534073 25.881140411341093 38.611313521213674 17.80924434291116 16 20.400968942631508 23.27530180987455 37.53602352771268 18.78770571978127 17 20.043851875192836 23.35342116837676 32.898425139991204 23.7043018164392 18 20.81585494744996 24.47466372570258 35.02898293846952 19.68049838837794 19 22.0677340790778 25.76560253658152 33.21320020219128 18.9534631821494 20 23.489309464258753 25.094695104739024 32.56428435446495 18.851711076537278 21 22.40581365578904 24.93418936395087 33.81846111428403 18.841535865976063 22 20.88051676940347 23.48176011448753 33.64810839553341 21.989614720575588 23 20.63368585514439 24.21765760088229 33.227970669134976 21.920685874838345 24 20.183022497062318 23.532307934694842 35.034562892648246 21.250106675594594 25 19.01779677150416 24.92598354898215 33.840780930998946 22.21543874851475 26 18.07281511970643 28.03073570054684 33.17414052294018 20.72230865680656 27 17.607381294680664 28.132816038757706 33.84734558297392 20.41245708358771 28 17.004089778180408 26.337711956200643 36.46270292980417 20.195495335814773 29 17.595893153724454 25.568991209931006 35.18456519027644 21.650550446068102 30 19.112984225141304 26.589794592039702 35.15403955859281 19.14318162422619 31 21.791362230931327 26.89111211769108 31.164044088202665 20.15348156317493 32 22.435026357077682 26.962338591619567 30.53941745278374 20.063217598519014 33 21.145400476593736 26.457188622145196 32.13823844128903 20.259172459972035 34 19.053902357366525 26.127314860402677 32.27839376095476 22.540389021276034 35 19.7320309063815 26.984001943136988 30.572568945257366 22.71139820522415 36 22.329007227681824 27.2344434159823 31.12038915256908 19.316160203766795 37 19.974923029455592 27.918480151774755 31.97576330490839 20.130833513861262 38 20.19319770762353 27.733028733481696 30.07496832555422 21.998805233340555 39 20.263767716354515 26.787062383887715 31.249712796476093 21.69945710328167 40 20.780405826785092 25.414721888519082 31.531664598801296 22.273207685894533 41 19.44220152168633 25.813196263400094 30.093349351084154 24.651252863829423 42 21.12669121846505 25.508924644359983 29.902646211211113 23.461737925963856 43 21.24288555842212 26.190991984559936 29.965995102769625 22.600127354248315 44 19.25871949898576 26.16670277225253 31.351793134686968 23.222784594074746 45 19.941771536981967 26.720759398940462 29.523865792255023 23.813603271822544 46 21.185116621042337 26.653799948795715 30.48854139997768 21.672542030184268 47 19.52787022995976 24.996881790311885 32.459906388062834 23.015341591665518 48 19.960152562511897 24.431008790068994 32.96243049674722 22.646408150671892 49 20.652723345871816 23.982971292776913 33.40259041166932 21.961714949681944 50 19.362112767591626 24.820949117382543 32.76910149608418 23.04783661894165 51 18.95083732135941 25.0205145374218 30.81381990533772 25.214828235881075 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 130.0 1 396.0 2 662.0 3 4332.5 4 8003.0 5 5240.5 6 2478.0 7 2345.5 8 2213.0 9 2130.5 10 2048.0 11 2040.0 12 2032.0 13 1889.5 14 1747.0 15 1670.0 16 1593.0 17 1559.0 18 1525.0 19 1554.0 20 1583.0 21 1589.5 22 1596.0 23 1832.5 24 2069.0 25 2267.5 26 3029.0 27 3592.0 28 4044.0 29 4496.0 30 5100.0 31 5704.0 32 6647.0 33 7590.0 34 8589.0 35 9588.0 36 10148.0 37 10708.0 38 11735.5 39 12763.0 40 14193.0 41 15623.0 42 17787.0 43 19951.0 44 21536.5 45 23122.0 46 24383.0 47 25644.0 48 26386.5 49 27129.0 50 25781.0 51 24433.0 52 21291.5 53 18150.0 54 16576.0 55 15002.0 56 13625.5 57 12249.0 58 10980.0 59 9711.0 60 9228.5 61 8746.0 62 8052.5 63 7359.0 64 6070.5 65 4782.0 66 3927.0 67 3072.0 68 2493.5 69 1915.0 70 1596.0 71 1277.0 72 1029.5 73 782.0 74 662.5 75 426.0 76 309.0 77 198.5 78 88.0 79 78.0 80 68.0 81 57.0 82 46.0 83 45.5 84 45.0 85 31.5 86 18.0 87 14.0 88 10.0 89 5.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 304662.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.48865563432701 #Duplication Level Percentage of deduplicated Percentage of total 1 72.68704910166466 25.068786055427307 2 10.090297148149565 6.960015671811244 3 3.940004850184094 4.076564114267321 4 2.3461213174184645 3.2365828077119607 5 1.4202932987829189 2.44920032407332 6 1.0661280858932147 2.2061594649873175 7 0.8367348975268736 2.020050321661977 8 0.6332843203058086 1.74728998733167 9 0.529565137550202 1.6437590698422537 >10 6.301924477997728 44.29378371086333 >50 0.12266762306548423 2.680782044289562 >100 0.02194055046699718 1.2740077870218807 >500 0.0029918932454996157 0.6885970814302929 >1k 9.97297748499872E-4 1.654421559280574 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4810 1.5787987999816189 No Hit GCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 839 0.2753871503502242 No Hit CCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 620 0.20350421122424192 No Hit TTATATGGGAACATATCCTTCCTCCTTTAAACTCATAAACTATTTTTTGAC 543 0.1782303011205861 No Hit CTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGCT 471 0.15459755401067413 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 372 0.12210252673454516 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17855853371933486 0.0 2 0.0 0.0 0.0 0.9118301593241034 0.0 3 0.0 0.0 0.0 1.1885302400693227 0.0 4 0.0 0.0 0.0 1.5574636810629485 0.0 5 0.0 0.0 0.0 2.4197307179759866 0.0 6 0.0 0.0 0.0 2.8529977483243725 0.0 7 0.0 0.0 0.0 3.291516500252739 0.0 8 0.0 0.0 0.0 4.129166092259619 0.0 9 0.0 0.0 0.0 4.420636639948533 0.0 10 0.0 0.0 0.0 5.144389520189587 0.0 11 0.0 0.0 0.0 6.2935318484090566 0.0 12 0.0 0.0 0.0 7.173523445654529 0.0 13 0.0 0.0 0.0 7.5979281958366975 0.0 14 0.0 0.0 0.0 7.782066683734762 0.0 15 0.0 0.0 0.0 8.101437002317322 0.0 16 0.0 0.0 0.0 8.75724573461738 0.0 17 0.0 0.0 0.0 9.540080482633213 0.0 18 0.0 0.0 0.0 10.477184552060972 0.0 19 3.282325987487773E-4 0.0 0.0 10.983975684529085 0.0 20 3.282325987487773E-4 0.0 0.0 11.500285562360911 0.0 21 3.282325987487773E-4 0.0 0.0 12.076333773165016 0.0 22 3.282325987487773E-4 0.0 0.0 12.671747707295298 0.0 23 3.282325987487773E-4 0.0 0.0 13.244185359513166 0.0 24 3.282325987487773E-4 0.0 0.0 13.754587050567514 0.0 25 3.282325987487773E-4 0.0 0.0 14.20951743243332 0.0 26 3.282325987487773E-4 0.0 0.0 14.621121111264287 0.0 27 3.282325987487773E-4 0.0 0.0 14.99858859982538 0.0 28 3.282325987487773E-4 0.0 0.0 15.401986463687628 0.0 29 3.282325987487773E-4 0.0 0.0 15.832955865844772 0.0 30 3.282325987487773E-4 0.0 0.0 16.325961229165436 0.0 31 3.282325987487773E-4 0.0 0.0 16.77498342425376 0.0 32 3.282325987487773E-4 0.0 0.0 17.17575542732602 0.0 33 3.282325987487773E-4 0.0 0.0 17.646440973931767 0.0 34 3.282325987487773E-4 0.0 0.0 18.082005632471393 0.0 35 3.282325987487773E-4 0.0 0.0 18.5369360143372 0.0 36 3.282325987487773E-4 0.0 0.0 18.967905416494343 0.0 37 3.282325987487773E-4 0.0 0.0 19.396905423058996 0.0 38 3.282325987487773E-4 0.0 0.0 19.82853129041364 0.0 39 3.282325987487773E-4 0.0 0.0 20.27361469431698 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATCC 20 7.025115E-4 45.000004 30 CGGCCTA 20 7.025115E-4 45.000004 39 TTCCGCA 20 7.025115E-4 45.000004 22 CACGTAT 20 7.025115E-4 45.000004 28 TTCGCGA 20 7.025115E-4 45.000004 1 CAATACG 20 7.025115E-4 45.000004 42 TGGTATT 20 7.025115E-4 45.000004 37 CGGCATT 25 3.8840357E-5 44.999996 20 TAGCGGA 30 2.1602318E-6 44.999996 3 TTATCGC 25 3.8840357E-5 44.999996 31 GTAGCGG 60 0.0 44.999996 2 ACGGCAT 25 3.8840357E-5 44.999996 19 TGTAGCG 25 3.8840357E-5 44.999996 1 TCGCGGC 25 3.8840357E-5 44.999996 34 TACGTAG 25 3.8840357E-5 44.999996 1 CGTTTTT 2125 0.0 43.2 1 GTCGGGA 60 3.6379788E-12 41.249996 4 TAGACGG 50 1.0768417E-9 40.499996 2 ACATACG 45 1.9203071E-8 40.000004 17 CTATCTC 80 0.0 39.375004 5 >>END_MODULE