SRR2936731.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936731.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	208827
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4667	2.2348642656361486	No Hit
GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC	727	0.34813505916380544	No Hit
CCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC	637	0.3050371838890565	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	479	0.22937646951783053	No Hit
CTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGCT	450	0.21548937637374477	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCG	389	0.1862785942430816	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGC	384	0.1838842678389289	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	368	0.17622242334564017	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTC	238	0.11396993683766944	No Hit
TCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC	229	0.10966014931019455	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAAATGC	20	7.0200174E-4	45.0	42
CTATGAT	35	1.2055534E-7	45.0	32
CGGAACA	20	7.0200174E-4	45.0	6
CTGTCGG	20	7.0200174E-4	45.0	1
CAAGTCT	20	7.0200174E-4	45.0	25
CCGATCT	20	7.0200174E-4	45.0	11
CGTGCGG	25	3.8798105E-5	45.0	2
TTAGCGG	20	7.0200174E-4	45.0	2
ATTGTCG	20	7.0200174E-4	45.0	1
GTTAGAC	20	7.0200174E-4	45.0	18
TAAGTCC	20	7.0200174E-4	45.0	27
AGAGTAG	25	3.8798105E-5	45.0	1
GACCAAT	20	7.0200174E-4	45.0	8
AAGCCGG	25	3.8798105E-5	45.0	10
TGCGCGG	20	7.0200174E-4	45.0	2
CATAGTT	35	1.2055534E-7	45.0	36
GCTTACC	20	7.0200174E-4	45.0	25
GATATAC	20	7.0200174E-4	45.0	9
CGGGATA	25	3.8798105E-5	45.0	6
ATGACTA	20	7.0200174E-4	45.0	12