##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936729.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 386362 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.081897288035574 31.0 31.0 33.0 28.0 34.0 2 31.132132559620253 31.0 31.0 34.0 28.0 34.0 3 30.874951470382697 31.0 30.0 34.0 27.0 34.0 4 34.84644193787174 35.0 35.0 37.0 32.0 37.0 5 35.12241628317484 35.0 35.0 37.0 33.0 37.0 6 35.112723300945746 36.0 35.0 37.0 32.0 37.0 7 31.150157106547745 35.0 35.0 37.0 0.0 37.0 8 33.13279773890807 35.0 35.0 37.0 17.0 37.0 9 36.405117480497566 39.0 35.0 39.0 32.0 39.0 10 36.13035443444231 37.0 35.0 39.0 32.0 39.0 11 36.3871265807714 38.0 35.0 39.0 32.0 39.0 12 36.395188967859156 38.0 35.0 39.0 32.0 39.0 13 36.30022103623027 38.0 35.0 39.0 32.0 39.0 14 37.39633556095061 39.0 36.0 40.0 32.0 41.0 15 37.60605080209751 39.0 36.0 41.0 33.0 41.0 16 37.55110492232673 39.0 36.0 41.0 33.0 41.0 17 37.456791817000635 39.0 36.0 41.0 32.0 41.0 18 37.36677002396716 39.0 36.0 40.0 32.0 41.0 19 37.13452151091463 39.0 36.0 40.0 32.0 41.0 20 37.061716731976745 39.0 35.0 40.0 32.0 41.0 21 37.08552083279412 39.0 35.0 40.0 32.0 41.0 22 37.15868278971534 39.0 35.0 40.0 32.0 41.0 23 37.233470165285404 39.0 35.0 40.0 32.0 41.0 24 37.14566391104715 39.0 35.0 40.0 32.0 41.0 25 36.83765484183227 39.0 35.0 40.0 31.0 41.0 26 36.8120881453145 39.0 35.0 40.0 31.0 41.0 27 36.82695244356329 39.0 35.0 40.0 31.0 41.0 28 36.83433671013195 39.0 35.0 40.0 31.0 41.0 29 36.84564993451737 39.0 35.0 40.0 31.0 41.0 30 36.624204761337815 38.0 35.0 40.0 31.0 41.0 31 36.560880728436025 38.0 35.0 40.0 31.0 41.0 32 36.35637821524891 38.0 35.0 40.0 30.0 41.0 33 36.17314073330193 38.0 35.0 40.0 30.0 41.0 34 36.06573369016622 38.0 35.0 40.0 30.0 41.0 35 35.966223386357875 39.0 35.0 40.0 29.0 41.0 36 35.85322314306272 38.0 35.0 40.0 29.0 41.0 37 35.777338351080076 38.0 35.0 40.0 29.0 41.0 38 35.664778109648466 38.0 35.0 40.0 28.0 41.0 39 35.630954907573724 38.0 35.0 40.0 27.0 41.0 40 35.510132984092635 38.0 35.0 40.0 27.0 41.0 41 35.36789591108857 38.0 35.0 40.0 26.0 41.0 42 35.3587904607596 38.0 35.0 40.0 26.0 41.0 43 35.263400644990966 38.0 34.0 40.0 26.0 41.0 44 35.07697703190272 38.0 34.0 40.0 25.0 41.0 45 35.01672783555318 38.0 34.0 40.0 25.0 41.0 46 34.912688100796665 38.0 34.0 40.0 24.0 41.0 47 34.854229970856345 38.0 34.0 40.0 24.0 41.0 48 34.790509936277374 38.0 34.0 40.0 24.0 41.0 49 34.68273018568079 37.0 34.0 40.0 24.0 41.0 50 34.54361453766157 37.0 34.0 40.0 24.0 41.0 51 32.86435260196396 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 15.0 9 25.0 10 24.0 11 22.0 12 18.0 13 14.0 14 13.0 15 29.0 16 59.0 17 117.0 18 201.0 19 375.0 20 609.0 21 921.0 22 1439.0 23 2039.0 24 3074.0 25 4377.0 26 5627.0 27 6206.0 28 6705.0 29 7314.0 30 8907.0 31 11092.0 32 14130.0 33 20053.0 34 30660.0 35 34717.0 36 38171.0 37 55865.0 38 74168.0 39 59370.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.67791345939818 21.6817388873647 24.345561934144662 13.294785719092458 2 34.9547833379059 24.222102587728607 24.84845818170524 15.97465589266025 3 31.567027813294267 23.83490094781578 29.466924801093274 15.131146437796678 4 28.47950885439044 25.37697806720123 28.33223764241825 17.811275435990083 5 25.573167133413744 29.518689726215314 26.45032378960664 18.45781935076431 6 24.880552435280904 36.119235328526095 25.555049409621027 13.445162826571972 7 67.63061584731417 17.50638002702129 11.502166362116357 3.3608377635481754 8 78.25277848235592 6.940382335736952 10.906352073961726 3.900487107945398 9 72.42353026436346 8.50161247741755 12.840807325772202 6.234049932446773 10 41.29236312059675 25.639167412944335 19.68697749778705 13.381491968671869 11 32.894021668797656 24.303891169421423 25.35653092177802 17.445556240002897 12 28.962734430404645 23.46322878543956 29.501607300925038 18.072429483230753 13 23.090262499935292 26.850725485425585 31.27145009084744 18.787561923791678 14 19.57283583789296 30.005538846988056 29.971373996407515 20.45025131871147 15 18.93069194175411 26.57171253901781 36.63093161335742 17.86666390587066 16 21.65300935392197 24.827493387030817 33.613295303368346 19.90620195567887 17 21.4935733845461 24.665469171398843 30.158763025349284 23.682194418705773 18 22.415247876343948 26.168463772317153 31.168955539105813 20.247332812233086 19 25.28664827286327 27.149409103379735 28.095671934610543 19.468270689146447 20 25.51493159265145 25.830438811270263 29.900714873615936 18.753914722462355 21 23.40214617379556 27.908541730294388 29.70607875515708 18.98323334075297 22 21.859551405158893 24.8194698236369 29.57278407296784 23.748194698236368 23 21.846868998503993 27.6062345675817 29.748008344505926 20.79888808940838 24 21.399878870075213 25.020317733110396 32.344019339376025 21.235784057438362 25 20.33973320357592 28.009483334282358 29.739984781112017 21.910798681029707 26 19.880060668492245 29.85774998576465 29.184029485301348 21.07815986044176 27 21.17418379654314 29.712549370797337 29.556736946180006 19.556529886479517 28 18.636925991686553 28.451814619450154 32.25886603755028 20.652393351313016 29 20.661711037834984 26.856937276440227 31.460909716794095 21.02044196893069 30 21.130183610189405 27.441622105693625 30.81954229453207 20.608651989584896 31 23.295251603418556 26.298134909747855 28.364073071368303 22.04254041546529 32 23.397487330534577 28.476920608134343 28.901392994135033 19.22419906719605 33 22.63498998348699 26.882302089750027 28.813133796801964 21.66957412996102 34 19.88704893338372 27.46543397124976 30.337869666271526 22.309647429094994 35 21.780609894347787 25.80455634870924 29.060828963510904 23.354004793432065 36 23.53052318809821 28.13190738219597 27.548516676070626 20.789052753635193 37 21.341384504687312 28.609438816446755 29.696243419383894 20.35293325948204 38 20.32187430440882 28.033812849089713 28.69355681977006 22.95075602673141 39 22.093270042084885 25.84441534105321 30.9932136183165 21.069100998545405 40 21.73738618187089 25.601896666856472 31.526651171699083 21.13406597957356 41 20.0239671603315 26.932772891744012 29.181182414419638 23.86207753350485 42 21.81503356955394 26.31780558129423 27.719858578224567 24.147302270927266 43 22.818237818418996 25.596978998969877 28.23259016155833 23.352193021052795 44 20.122320518063372 27.529622478401084 29.162547041375703 23.185509962159838 45 20.850911839156026 27.074867611204002 28.33042587003898 23.743794679600995 46 21.458373235463117 28.63635657751021 27.62331699287197 22.281953194154706 47 20.734958406882665 25.920768605608213 31.40810949316962 21.936163494339507 48 21.568891350598662 25.312271910798685 30.136762932172417 22.98207380643024 49 20.18314430508176 25.125400531108134 31.352203374037817 23.339251789772288 50 19.419094010280514 25.48387263757823 30.7286948509429 24.36833850119836 51 19.495706099461128 25.247824579021742 29.53214860674704 25.724320714770087 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 206.0 1 409.5 2 613.0 3 3353.0 4 6093.0 5 4207.0 6 2321.0 7 2127.0 8 1933.0 9 1881.5 10 1830.0 11 1782.5 12 1735.0 13 1675.5 14 1616.0 15 1641.5 16 1667.0 17 1536.0 18 1405.0 19 1443.5 20 1482.0 21 1737.0 22 1992.0 23 1967.5 24 1943.0 25 2538.5 26 3345.0 27 3556.0 28 4377.5 29 5199.0 30 6734.5 31 8270.0 32 9205.5 33 10141.0 34 11068.0 35 11995.0 36 12261.5 37 12528.0 38 13667.0 39 14806.0 40 16961.5 41 19117.0 42 21694.5 43 24272.0 44 26426.0 45 28580.0 46 32627.5 47 36675.0 48 35675.5 49 34676.0 50 32649.5 51 30623.0 52 26386.0 53 22149.0 54 20364.0 55 18579.0 56 17892.0 57 17205.0 58 15914.0 59 14623.0 60 13910.0 61 13197.0 62 12205.5 63 11214.0 64 9462.5 65 7711.0 66 6217.5 67 4724.0 68 4001.5 69 3279.0 70 2769.5 71 2260.0 72 1765.0 73 1270.0 74 1006.5 75 563.0 76 383.0 77 335.0 78 287.0 79 226.5 80 166.0 81 116.0 82 66.0 83 67.0 84 68.0 85 41.5 86 15.0 87 12.0 88 9.0 89 5.0 90 1.0 91 2.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 386362.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.15906024101209 #Duplication Level Percentage of deduplicated Percentage of total 1 77.19824089171638 27.14217602012019 2 8.744866205830643 6.149225554607809 3 3.207129379557119 3.3827896516970553 4 1.8340013967208166 2.5792706235763 5 1.2156732375712316 2.1370964296576567 6 0.9183042288842613 1.937202822175074 7 0.6876070701117983 1.6922932880144577 8 0.5304860342157566 1.4921112347205912 9 0.3911989091716016 1.2378767412404301 >10 4.925511897740536 41.183881924141645 >50 0.30056931078512644 6.276405453747364 >100 0.04272799025866993 2.6302780365964216 >500 7.366894872184471E-4 0.25590494339313286 >1k 0.0029467579488737885 1.903487276311876 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3435 0.889062588970965 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGC 1446 0.3742604086323189 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCG 1386 0.35873093109570814 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTC 1082 0.28004824491021374 No Hit GCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC 988 0.2557187301028569 No Hit CTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGCT 479 0.12397699566727577 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 448 0.11595343227336022 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.176492512203581E-4 0.0 0.0 0.14494179034170027 0.0 2 5.176492512203581E-4 0.0 0.0 0.6915793996303984 0.0 3 5.176492512203581E-4 0.0 0.0 0.8492035966269975 0.0 4 5.176492512203581E-4 0.0 0.0 1.1238165243993974 0.0 5 5.176492512203581E-4 0.0 0.0 2.0879382547973147 0.0 6 5.176492512203581E-4 0.0 0.0 2.5186224318126524 0.0 7 5.176492512203581E-4 0.0 0.0 2.983212634782924 0.0 8 5.176492512203581E-4 0.0 0.0 3.7889336943074112 0.0 9 5.176492512203581E-4 0.0 0.0 4.0332641408834204 0.0 10 5.176492512203581E-4 0.0 0.0 5.133527624352292 0.0 11 5.176492512203581E-4 0.0 0.0 6.161320212650312 0.0 12 5.176492512203581E-4 0.0 0.0 7.364854721737645 0.0 13 5.176492512203581E-4 0.0 0.0 7.717373861818709 0.0 14 5.176492512203581E-4 0.0 0.0 7.865421547667731 0.0 15 5.176492512203581E-4 0.0 0.0 8.184293486419472 0.0 16 5.176492512203581E-4 0.0 0.0 8.826955031809547 0.0 17 5.176492512203581E-4 0.0 0.0 9.578322919955896 0.0 18 5.176492512203581E-4 0.0 0.0 10.4073381957853 0.0 19 5.176492512203581E-4 0.0 0.0 10.892634368804385 0.0 20 5.176492512203581E-4 0.0 0.0 11.373012873936878 0.0 21 5.176492512203581E-4 0.0 0.0 11.942168225653662 0.0 22 5.176492512203581E-4 0.0 0.0 12.550406095837582 0.0 23 5.176492512203581E-4 0.0 0.0 13.205491223256946 0.0 24 5.176492512203581E-4 0.0 0.0 13.684575605261386 0.0 25 5.176492512203581E-4 0.0 0.0 14.101800901744996 0.0 26 5.176492512203581E-4 0.0 0.0 14.4985790528054 0.0 27 5.176492512203581E-4 0.0 0.0 14.943239759603689 0.0 28 5.176492512203581E-4 0.0 0.0 15.360982705338516 0.0 29 5.176492512203581E-4 0.0 0.0 15.795549251738008 0.0 30 5.176492512203581E-4 0.0 0.0 16.322775014105943 0.0 31 5.176492512203581E-4 0.0 0.0 16.819718295277486 0.0 32 5.176492512203581E-4 0.0 0.0 17.310967434685605 0.0 33 5.176492512203581E-4 0.0 0.0 17.732075100553367 0.0 34 5.176492512203581E-4 0.0 0.0 18.148523923160145 0.0 35 5.176492512203581E-4 0.0 0.0 18.60017289484991 0.0 36 5.176492512203581E-4 0.0 0.0 19.058551306805533 0.0 37 5.176492512203581E-4 0.0 0.0 19.550835744716096 0.0 38 5.176492512203581E-4 0.0 0.0 19.996014100765603 0.0 39 5.176492512203581E-4 0.0 0.0 20.489075012552995 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.0274656E-4 45.000004 25 TAGACCG 35 1.2091368E-7 45.000004 1 AGAACCG 20 7.0274656E-4 45.000004 10 AAGTTAG 30 2.161747E-6 45.000004 1 ACGTGCG 20 7.0274656E-4 45.000004 1 CGAATAT 60 0.0 45.000004 14 AACGACG 20 7.0274656E-4 45.000004 1 GCTACGA 60 0.0 45.000004 10 GCGCTAG 20 7.0274656E-4 45.000004 9 CCCGGTC 20 7.0274656E-4 45.000004 36 CGATCAC 20 7.0274656E-4 45.000004 13 TCGCGAG 20 7.0274656E-4 45.000004 15 TAGTAAC 20 7.0274656E-4 45.000004 10 TGATCGG 45 3.8380676E-10 45.0 2 GCGAATT 25 3.885982E-5 45.0 9 ACCGCAC 25 3.885982E-5 45.0 10 GGCGCTA 25 3.885982E-5 45.0 8 GGTTCGC 25 3.885982E-5 45.0 41 CGTTTTT 1570 0.0 43.71019 1 TACGAAT 65 0.0 41.53846 12 >>END_MODULE