##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936724.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 167598 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.96242198594255 31.0 30.0 33.0 28.0 34.0 2 31.047255933841694 31.0 31.0 34.0 28.0 34.0 3 30.695628826119645 31.0 30.0 34.0 27.0 34.0 4 34.627710354538834 35.0 35.0 37.0 32.0 37.0 5 35.00414086086946 35.0 35.0 37.0 32.0 37.0 6 35.042178307617036 35.0 35.0 37.0 32.0 37.0 7 31.39636511175551 35.0 35.0 37.0 0.0 37.0 8 33.26436472988938 35.0 35.0 37.0 17.0 37.0 9 36.33657322879748 39.0 35.0 39.0 32.0 39.0 10 36.1494230241411 37.0 35.0 39.0 32.0 39.0 11 36.31685938973019 37.0 35.0 39.0 32.0 39.0 12 36.252693946228476 37.0 35.0 39.0 32.0 39.0 13 35.89834604231554 38.0 35.0 39.0 31.0 39.0 14 36.96377045072137 39.0 35.0 40.0 31.0 41.0 15 37.258988770749056 39.0 35.0 40.0 32.0 41.0 16 37.28245563789544 39.0 35.0 40.0 32.0 41.0 17 37.20446544708171 39.0 35.0 40.0 32.0 41.0 18 37.05902218403561 39.0 35.0 40.0 32.0 41.0 19 36.69914915452452 38.0 35.0 40.0 31.0 41.0 20 36.57063926777169 38.0 35.0 40.0 31.0 41.0 21 36.56002458263225 38.0 35.0 40.0 31.0 41.0 22 36.621105263785964 38.0 35.0 40.0 31.0 41.0 23 36.73604100287593 38.0 35.0 40.0 32.0 41.0 24 36.60768624923925 38.0 35.0 40.0 31.0 41.0 25 36.3534827384575 38.0 35.0 40.0 31.0 41.0 26 36.27441258248905 38.0 35.0 40.0 31.0 41.0 27 36.27613694674161 38.0 35.0 40.0 31.0 41.0 28 36.320158951777465 38.0 35.0 40.0 31.0 41.0 29 36.29914438119787 38.0 35.0 40.0 31.0 41.0 30 36.0301793577489 38.0 35.0 40.0 30.0 41.0 31 35.905696965357585 38.0 35.0 40.0 30.0 41.0 32 35.481682358978034 38.0 34.0 40.0 29.0 41.0 33 35.16043150872922 38.0 34.0 40.0 26.0 41.0 34 34.934342891919954 38.0 34.0 40.0 24.0 41.0 35 34.671117793768424 38.0 34.0 40.0 23.0 41.0 36 34.609512046683136 38.0 34.0 40.0 23.0 41.0 37 34.40683659709543 38.0 34.0 40.0 22.0 41.0 38 34.34855427869068 38.0 34.0 40.0 22.0 41.0 39 34.34540984975954 38.0 34.0 40.0 22.0 41.0 40 34.15081325552811 37.0 33.0 40.0 21.0 41.0 41 34.063312211362906 37.0 33.0 40.0 20.0 41.0 42 33.9900297139584 37.0 33.0 40.0 20.0 41.0 43 33.86323225814151 37.0 33.0 40.0 19.0 41.0 44 33.61434503991694 37.0 33.0 40.0 18.0 41.0 45 33.58611677943651 37.0 33.0 40.0 18.0 41.0 46 33.47035167484099 37.0 33.0 40.0 18.0 41.0 47 33.36270122555162 36.0 32.0 40.0 18.0 41.0 48 33.30502153963651 36.0 32.0 40.0 18.0 41.0 49 33.21459683289777 36.0 32.0 40.0 18.0 41.0 50 32.97412260289502 36.0 32.0 40.0 15.0 41.0 51 31.320415518084943 35.0 29.0 38.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 8.0 10 6.0 11 9.0 12 8.0 13 8.0 14 4.0 15 9.0 16 34.0 17 47.0 18 117.0 19 242.0 20 349.0 21 615.0 22 838.0 23 1294.0 24 2052.0 25 2940.0 26 3886.0 27 4043.0 28 3922.0 29 3980.0 30 4395.0 31 5369.0 32 6928.0 33 9458.0 34 15371.0 35 16756.0 36 14964.0 37 21640.0 38 28061.0 39 20240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.22660174942422 19.043783338703328 23.32724734185372 18.402367570018736 2 36.86619172066493 23.873793243356126 23.379157269179824 15.880857766799124 3 29.429348798911683 22.141075669160728 33.73488943782145 14.694686094106135 4 25.256864640389505 22.80874473442404 34.53621164930369 17.398178975882768 5 24.907815129058818 26.221673289657392 32.089881740832226 16.780629840451557 6 23.720450124703156 31.27781954438597 31.289156195181327 13.712574135729543 7 62.050859795462955 16.257353906371197 17.91787491497512 3.7739113831907303 8 71.36958674924522 6.334801131278415 17.136839341758257 5.158772777718111 9 67.22037255814509 5.926681702645617 18.96741011229251 7.885535626916789 10 40.79702621749663 21.22698361555627 25.676320719817657 12.29966944712944 11 32.53439778517643 21.47340660389742 30.830320170885095 15.161875440041051 12 29.375052208260243 20.70848100812659 33.48011312784162 16.436353655771548 13 19.811095597799497 28.798673015191113 36.60365875487774 14.786572632131648 14 16.948292939056554 30.740820296184918 33.867349252377714 18.443537512380818 15 14.634422845141351 24.333225933483693 46.001145598396164 15.031205622978794 16 16.127280755140276 22.010405852098476 41.95217126696023 19.910142125801023 17 16.491843578085657 21.687012971515173 36.45687896036945 25.364264490029715 18 20.458478024797433 22.80993806608671 37.69436389455721 19.037220014558645 19 20.48115132638814 26.53134285612 33.00815045525603 19.979355362235825 20 23.638110239978996 24.207926108903447 35.125717490662176 17.028246160455378 21 19.965632048115133 26.326686475972267 35.222974021169705 18.484707454742896 22 17.639828637573242 24.35530256924307 35.45686702705283 22.54800176613086 23 16.97693289896061 26.39351304908173 34.84826787909164 21.781286172866025 24 20.56289454528097 21.818279454408763 36.992088211076506 20.62673778923376 25 16.567023472833807 25.805797205217246 35.706870010381984 21.920309311566964 26 17.846275015214978 27.970500841298822 34.36675855320469 19.816465590281506 27 17.29376245539923 29.07134930011098 34.330958603324625 19.30392964116517 28 14.612346209381974 25.268201291184862 40.61683313643361 19.50261936299956 29 18.700103819854654 25.142901466604613 36.00162293106123 20.155371782479506 30 18.243654458883757 26.742562560412413 36.258785904366405 18.754997076337425 31 23.33500399766107 25.093974868435183 30.44368071218034 21.12734042172341 32 22.269358822897647 29.70202508383155 30.951443334646 17.077172758624805 33 20.858840797622882 27.292091791071492 31.097029797491615 20.752037613814007 34 21.43760665401735 25.994940273750284 31.635222377355337 20.932230694877028 35 18.14818792587024 29.934724758052006 29.99737467034213 21.91971264573563 36 24.33143593598969 25.95078700223153 30.9186267139226 18.79915034785618 37 18.91848351412308 30.6781703838948 32.44788123963293 17.955464862349192 38 18.075991360278763 29.672191792264822 29.506915356985168 22.744901490471246 39 22.320075418561082 26.15484671654793 31.988448549505367 19.536629315385625 40 22.148235659136745 25.76403059702383 33.00337712860536 19.08435661523407 41 21.01755390875786 26.509266220360622 29.66682179978281 22.8063580710987 42 21.72818291387725 26.974665568801537 29.722311722096922 21.57483979522429 43 23.676893519015742 24.96927170968627 29.416222150622325 21.937612620675665 44 19.364192890129953 27.100562059213118 30.654303750641414 22.880941300015515 45 19.76694232628074 28.528383393596584 28.027184095275597 23.677490184847073 46 23.48178379216936 26.188260003102666 30.06539457511426 20.26456162961372 47 19.3373429277199 26.170956693993965 33.87629923984773 20.615401138438404 48 21.21624363059225 25.76104726786716 30.372677478251532 22.65003162328906 49 19.506199357987565 23.48476712132603 34.555304955906394 22.45372856478001 50 19.7454623563527 25.096958197591857 32.43654458883757 22.721034857217866 51 18.917290182460412 25.616654136684208 29.434718791393692 26.031336889461688 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 126.0 1 171.0 2 216.0 3 2547.5 4 4879.0 5 3365.5 6 1852.0 7 1720.0 8 1588.0 9 1622.5 10 1657.0 11 1587.0 12 1517.0 13 1426.0 14 1335.0 15 1232.0 16 1129.0 17 1074.5 18 1020.0 19 974.5 20 929.0 21 919.0 22 909.0 23 961.0 24 1013.0 25 980.0 26 1203.5 27 1460.0 28 1720.0 29 1980.0 30 2352.5 31 2725.0 32 3127.5 33 3530.0 34 3943.5 35 4357.0 36 4569.5 37 4782.0 38 5402.5 39 6023.0 40 7021.5 41 8020.0 42 9853.5 43 11687.0 44 13370.5 45 15054.0 46 17785.5 47 20517.0 48 18827.0 49 17137.0 50 16193.0 51 15249.0 52 12549.0 53 9849.0 54 8128.5 55 6408.0 56 5780.0 57 5152.0 58 4856.0 59 4560.0 60 4013.5 61 3467.0 62 3239.0 63 3011.0 64 2317.5 65 1624.0 66 1207.5 67 791.0 68 645.0 69 499.0 70 366.5 71 234.0 72 205.0 73 176.0 74 131.0 75 74.0 76 62.0 77 39.0 78 16.0 79 12.5 80 9.0 81 8.0 82 7.0 83 6.0 84 5.0 85 2.5 86 0.0 87 0.5 88 1.0 89 2.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 167598.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.16930989629948 #Duplication Level Percentage of deduplicated Percentage of total 1 76.90516015069329 29.354168904163537 2 9.571524597083053 7.306769770522322 3 3.6516546560160075 4.1814341459921955 4 1.9071141611042504 2.911729256912374 5 1.1958543715120915 2.282246804854473 6 0.7862937893733098 1.8007374789675294 7 0.6237201231808164 1.6664876669172664 8 0.45489362367322694 1.3890380553467225 9 0.32671054071376093 1.1223284287401998 >10 4.417626737115255 38.56430267664292 >50 0.12661987463069205 3.0054057924318904 >100 0.025011333260383614 1.9928638766572395 >500 0.0031264166575479518 1.1420184011742383 >1k 0.004689624986321928 3.2804687406770965 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2882 1.719590925906037 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 1332 0.7947588873375577 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 1284 0.7661189274335016 No Hit GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 996 0.5942791680091648 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 918 0.5477392331650736 No Hit CCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 469 0.2798362748958818 No Hit CTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGCT 303 0.18078974689435434 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCT 273 0.16288977195431925 No Hit TCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 254 0.15155312115896372 No Hit TATCGCGGGGAATGTTGTACTTACACCTCTGTACAGAAATGACAGTGAGCT 244 0.14558646284561869 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTC 220 0.1312664828935906 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 206 0.12291316125490757 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTA 192 0.11455983961622454 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 181 0.10799651547154501 No Hit ACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 172 0.1026265229895345 No Hit TATTAGATGTTTGTGTAATCACTTGCTTATTTAAATAAATTTTGAGTACTG 168 0.10023985966419646 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22315302091910405 0.0 2 0.0 0.0 0.0 1.574601128891753 0.0 3 0.0 0.0 0.0 1.9003806728003914 0.0 4 0.0 0.0 0.0 2.48451652167687 0.0 5 0.0 0.0 0.0 4.3097172997291135 0.0 6 0.0 0.0 0.0 4.952923065907708 0.0 7 0.0 0.0 0.0 5.7834819031253355 0.0 8 0.0 0.0 0.0 7.108080048687932 0.0 9 0.0 0.0 0.0 7.500686165706035 0.0 10 5.966658313345028E-4 0.0 0.0 9.331853602071623 0.0 11 0.0011933316626690056 0.0 0.0 10.679721715056266 0.0 12 0.0011933316626690056 0.0 0.0 12.648718958460124 0.0 13 0.0011933316626690056 0.0 0.0 13.15409491760045 0.0 14 0.0011933316626690056 0.0 0.0 13.387987923483573 0.0 15 0.0011933316626690056 0.0 0.0 13.856967266912493 0.0 16 0.0011933316626690056 0.0 0.0 14.662466139214072 0.0 17 0.0011933316626690056 0.0 0.0 15.638611439277318 0.0 18 0.0011933316626690056 0.0 0.0 16.723349920643443 0.0 19 0.0011933316626690056 0.0 0.0 17.31882242031528 0.0 20 0.0011933316626690056 0.0 0.0 17.871334980131028 0.0 21 0.0011933316626690056 0.0 0.0 18.56466067614172 0.0 22 0.0011933316626690056 0.0 0.0 19.31466962612919 0.0 23 0.0011933316626690056 0.0 0.0 20.040215277031944 0.0 24 0.0011933316626690056 0.0 0.0 20.547381233666272 0.0 25 0.0011933316626690056 0.0 0.0 21.008603921287843 0.0 26 0.0011933316626690056 0.0 0.0 21.43999331734269 0.0 27 0.0011933316626690056 0.0 0.0 21.867206052578194 0.0 28 0.0011933316626690056 0.0 0.0 22.32663874270576 0.0 29 0.0011933316626690056 0.0 0.0 22.783088103676654 0.0 30 0.0011933316626690056 0.0 0.0 23.323667346865715 0.0 31 0.0011933316626690056 0.0 0.0 23.847539946777406 0.0 32 0.0011933316626690056 0.0 0.0 24.31293929521832 0.0 33 0.0011933316626690056 0.0 0.0 24.828458573491332 0.0 34 0.0011933316626690056 0.0 0.0 25.29445458776358 0.0 35 0.0011933316626690056 0.0 0.0 25.79147722526522 0.0 36 0.0011933316626690056 0.0 0.0 26.22644661630807 0.0 37 0.0011933316626690056 0.0 0.0 26.660222675688253 0.0 38 0.0017899974940035084 0.0 0.0 27.136362009093187 0.0 39 0.002386663325338011 0.0 0.0 27.620854664136804 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTGG 30 2.1543747E-6 45.000004 2 AATGGAG 30 2.1543747E-6 45.000004 17 GACCCCA 30 2.1543747E-6 45.000004 29 ACGGGAG 30 2.1543747E-6 45.000004 5 CCGAGGG 30 2.1543747E-6 45.000004 3 GGGCCGA 30 2.1543747E-6 45.000004 7 GGACCAT 30 2.1543747E-6 45.000004 8 TCTGCGG 20 7.016028E-4 45.0 4 ACAACGG 20 7.016028E-4 45.0 2 TTCTAGA 25 3.8765058E-5 45.0 44 TGTCAGT 20 7.016028E-4 45.0 31 TTAGGCG 20 7.016028E-4 45.0 1 TAGAGCC 20 7.016028E-4 45.0 41 AACCGAG 20 7.016028E-4 45.0 11 CAAACTC 25 3.8765058E-5 45.0 19 ATTAGGA 25 3.8765058E-5 45.0 4 ATCTACC 20 7.016028E-4 45.0 15 GGATGCA 25 3.8765058E-5 45.0 9 CATGCAT 20 7.016028E-4 45.0 25 GCGCGAT 20 7.016028E-4 45.0 1 >>END_MODULE