##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936719.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 501149 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.148520699432705 31.0 31.0 33.0 28.0 34.0 2 31.19403610503064 31.0 31.0 34.0 28.0 34.0 3 30.918776651255413 31.0 31.0 34.0 27.0 34.0 4 34.89617059996129 35.0 35.0 37.0 32.0 37.0 5 35.179559372561855 35.0 35.0 37.0 33.0 37.0 6 35.181997769126546 36.0 35.0 37.0 33.0 37.0 7 31.098751070041047 35.0 35.0 37.0 0.0 37.0 8 33.13042428499308 36.0 35.0 37.0 17.0 37.0 9 36.38186846626452 39.0 35.0 39.0 32.0 39.0 10 36.21216843693193 37.0 35.0 39.0 32.0 39.0 11 36.430149516411284 38.0 35.0 39.0 32.0 39.0 12 36.42816008811751 38.0 35.0 39.0 32.0 39.0 13 36.31222450808043 38.0 35.0 39.0 32.0 39.0 14 37.28041360952531 39.0 36.0 40.0 32.0 41.0 15 37.46825993866096 39.0 36.0 41.0 32.0 41.0 16 37.458849563702614 39.0 36.0 41.0 32.0 41.0 17 37.39804329650463 39.0 36.0 40.0 32.0 41.0 18 37.27740252898838 39.0 36.0 40.0 32.0 41.0 19 37.057272388052255 39.0 35.0 40.0 32.0 41.0 20 36.98647108943648 39.0 35.0 40.0 32.0 41.0 21 36.959313497582556 39.0 35.0 40.0 32.0 41.0 22 37.06115546474202 39.0 35.0 40.0 32.0 41.0 23 37.14103789491748 39.0 35.0 40.0 32.0 41.0 24 37.05676355734522 39.0 35.0 40.0 32.0 41.0 25 36.77500104759263 38.0 35.0 40.0 31.0 41.0 26 36.763435624933905 38.0 35.0 40.0 31.0 41.0 27 36.79179645175387 38.0 35.0 40.0 31.0 41.0 28 36.812945850435696 39.0 35.0 40.0 32.0 41.0 29 36.77697650798465 39.0 35.0 40.0 31.0 41.0 30 36.56787502319669 38.0 35.0 40.0 31.0 41.0 31 36.47620967017793 38.0 35.0 40.0 31.0 41.0 32 36.25364113267711 38.0 35.0 40.0 30.0 41.0 33 36.089282828061116 38.0 35.0 40.0 30.0 41.0 34 35.9020411095303 38.0 35.0 40.0 29.0 41.0 35 35.798648705275276 38.0 35.0 40.0 29.0 41.0 36 35.708430027796126 38.0 35.0 40.0 28.0 41.0 37 35.610157857244054 38.0 35.0 40.0 28.0 41.0 38 35.457269195388996 38.0 35.0 40.0 27.0 41.0 39 35.41096759646333 38.0 35.0 40.0 27.0 41.0 40 35.297977248283445 38.0 34.0 40.0 26.0 41.0 41 35.115263125337975 38.0 34.0 40.0 25.0 41.0 42 35.14805177701642 38.0 34.0 40.0 25.0 41.0 43 35.099469419274506 38.0 34.0 40.0 25.0 41.0 44 34.88351967179422 38.0 34.0 40.0 24.0 41.0 45 34.78634098840864 38.0 34.0 40.0 24.0 41.0 46 34.68657824319713 38.0 34.0 40.0 24.0 41.0 47 34.630361429435155 37.0 34.0 40.0 23.0 41.0 48 34.54503949923077 37.0 34.0 40.0 23.0 41.0 49 34.48183673917338 37.0 34.0 40.0 24.0 41.0 50 34.29653456357291 37.0 33.0 40.0 23.0 41.0 51 32.589465408491286 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 16.0 9 37.0 10 53.0 11 46.0 12 34.0 13 16.0 14 22.0 15 35.0 16 68.0 17 143.0 18 253.0 19 464.0 20 780.0 21 1221.0 22 1843.0 23 2880.0 24 4218.0 25 5990.0 26 7650.0 27 8376.0 28 9033.0 29 9909.0 30 11729.0 31 14751.0 32 19181.0 33 26996.0 34 41220.0 35 45238.0 36 49106.0 37 71977.0 38 94048.0 39 73813.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.53325458097292 20.767675880825863 24.08505254924184 14.614016988959373 2 35.88872770373681 23.76019906255425 23.842609682948584 16.508463550760354 3 31.779171463975786 23.063998930457807 29.03507739215283 16.121752213413576 4 28.533629718905956 23.723483435066218 29.05842374224033 18.684463103787497 5 25.713709894662067 28.26983591706259 27.362121844002484 18.654332344272863 6 25.540906995723827 33.12687444253106 28.107409173718796 13.224809388026316 7 66.42276049637931 17.498189161307316 12.410680256769943 3.6683700855434207 8 76.59598243237042 6.514230298773419 12.472538107429127 4.417249161427041 9 71.01241347383713 7.39779985593107 14.652728030984797 6.937058639247011 10 42.37143045281942 22.456594745275357 21.261740520284388 13.910234281620834 11 31.242404953417047 24.524841913283275 26.241696581256274 17.991056552043403 12 27.62890876765194 22.7608954622278 31.197109043418227 18.413086726702037 13 24.128153503249532 24.93470005926381 33.70793915581993 17.22920728166673 14 20.115374868552067 27.036669732953673 32.908975175047736 19.93898022344652 15 17.92620557957813 24.003839177569944 39.28452416347234 18.785431079379585 16 21.679380782960756 24.81477564556649 34.29079974219244 19.215043829280315 17 22.748523892095964 23.416588679215163 31.401040409139796 22.433847019549077 18 23.335973931904483 23.47226074480843 33.53812937868778 19.65363594459931 19 24.141522780650064 25.036665742124598 30.39934231136848 20.42246916585686 20 25.027686376706328 25.687569964222217 30.820973403119634 18.46377025595182 21 23.597772319210456 25.85099441483471 32.70743830677104 17.843794959183796 22 22.521246176286894 22.92531762010899 32.02281157899148 22.530624624612642 23 21.11108672271121 25.52175101616485 32.68868141011955 20.67848085100439 24 21.07676559266805 23.96991713043426 32.72639474487627 22.226922532021415 25 20.64415972096123 26.186822681477963 31.84282518771862 21.326192409842182 26 20.09761567916927 25.251571887801834 31.974921630094045 22.675890802934855 27 20.790423606552146 26.182632310949437 32.5859175614438 20.441026521054617 28 18.68645851832489 25.26913153573089 33.797732810002614 22.246677135941606 29 20.30992778594789 24.991569373579516 33.82886127678594 20.86964156368665 30 21.516155873802003 24.44283037579642 34.0732995576166 19.96771419278498 31 24.266435730690873 23.865556950128607 30.866468854572194 21.00153846460833 32 23.261944052567202 25.45869591678323 31.084567663509254 20.194792367140312 33 23.36849918886399 24.132942498139276 30.49272771171847 22.005830601278262 34 21.812275391151132 23.831036278631704 32.703846560603736 21.652841769613428 35 19.74662226204183 25.66681765303333 32.23292872977897 22.353631355145875 36 23.72328389361248 25.288886139651083 30.456211625684176 20.531618341052262 37 22.063498081408923 26.201389207600933 31.0771846297209 20.657928081269244 38 21.205669371783642 26.928917347934444 29.626917343943614 22.238495936338296 39 21.860165340048567 24.2005870509569 31.367916527819073 22.571331081175458 40 23.128849902923083 23.271721583800424 31.21287281826363 22.38655569501286 41 20.1977854889464 24.06050895043191 29.670616922312526 26.071088638309163 42 21.809082727891305 23.473857076438346 30.80281513082935 23.914245064840994 43 22.099415543082 23.654043009164937 30.06411266908644 24.182428778666623 44 21.759995530271436 24.286190334611064 30.644578758014084 23.309235377103416 45 21.310827717904257 24.58669976394246 29.93401164124841 24.168460876904874 46 22.46736998377728 24.948069336664343 30.296378921238993 22.288181758319382 47 20.16386344181072 24.380573442229757 32.70205068752008 22.753512428439446 48 21.054416949849248 24.762495784686788 31.187331512185 22.995755753278964 49 21.92282135652271 22.862062979273627 32.92194536954079 22.293170294662865 50 20.350434701056972 24.57233277927323 31.433166583191824 23.644065936477972 51 20.205767147095973 24.119174137831266 29.52455257817535 26.150506136897413 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 176.0 1 516.5 2 857.0 3 4806.0 4 8755.0 5 5951.5 6 3148.0 7 2907.5 8 2667.0 9 2663.5 10 2660.0 11 2541.5 12 2423.0 13 2352.5 14 2282.0 15 2162.0 16 2042.0 17 1978.0 18 1914.0 19 1996.5 20 2079.0 21 2324.0 22 2569.0 23 2680.0 24 2791.0 25 3070.5 26 3878.5 27 4407.0 28 5242.5 29 6078.0 30 7403.0 31 8728.0 32 9926.0 33 11124.0 34 12637.0 35 14150.0 36 15493.5 37 16837.0 38 17980.5 39 19124.0 40 21527.0 41 23930.0 42 26727.0 43 29524.0 44 32062.5 45 34601.0 46 41394.0 47 48187.0 48 46399.0 49 44611.0 50 43109.5 51 41608.0 52 36989.5 53 32371.0 54 29231.0 55 26091.0 56 24263.0 57 22435.0 58 20688.0 59 18941.0 60 17634.0 61 16327.0 62 15029.5 63 13732.0 64 11754.5 65 9777.0 66 8392.5 67 7008.0 68 5920.0 69 4832.0 70 4297.5 71 3763.0 72 3002.0 73 2241.0 74 1876.0 75 1142.0 76 773.0 77 580.5 78 388.0 79 274.5 80 161.0 81 108.5 82 56.0 83 45.5 84 35.0 85 33.0 86 31.0 87 31.5 88 32.0 89 23.0 90 14.0 91 7.5 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 2.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 501149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.08110771583605 #Duplication Level Percentage of deduplicated Percentage of total 1 74.74725216640084 24.727219003794655 2 9.633049722902538 6.373439110306868 3 3.693199094348037 3.6652535116846665 4 2.0873723468410152 2.7621035779562044 5 1.399450746872449 2.3147690450147347 6 1.0207279356999444 2.02600864736717 7 0.7290223716467539 1.6881807322590365 8 0.5386064920690837 1.4254159504468762 9 0.4309644547286064 1.2831103393716217 >10 5.366549816244396 43.161456056933844 >50 0.3231176966943763 6.404696510421047 >100 0.02647519302523754 1.5217523875611918 >500 0.0012034178647835243 0.2838481235660248 >1k 0.003008544661958811 2.362747003316069 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4908 0.9793494549525191 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCG 2142 0.4274177939095958 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGC 1954 0.389904000606606 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTC 1563 0.311883292194537 No Hit GCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 1303 0.2600025142223171 TruSeq Adapter, Index 21 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 868 0.17320198184571856 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGCT 558 0.11134413118653334 TruSeq Adapter, Index 14 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13608727145020744 0.0 2 0.0 0.0 0.0 0.8087415120054116 0.0 3 0.0 0.0 0.0 1.0517830026598876 0.0 4 0.0 0.0 0.0 1.4414874618127542 0.0 5 0.0 0.0 0.0 2.645321052221994 0.0 6 0.0 0.0 0.0 3.1326012822533817 0.0 7 0.0 0.0 0.0 3.729828853295128 0.0 8 0.0 0.0 0.0 4.655900740099252 0.0 9 0.0 0.0 0.0 4.97317165154475 0.0 10 0.0 0.0 0.0 6.147473106800573 0.0 11 0.0 0.0 0.0 7.24235706346815 0.0 12 0.0 0.0 0.0 8.499468222025785 0.0 13 0.0 0.0 0.0 8.8752047794169 0.0 14 0.0 0.0 0.0 9.037431981306957 0.0 15 0.0 0.0 0.0 9.39081989587927 0.0 16 0.0 0.0 0.0 10.027756216215138 0.0 17 0.0 0.0 0.0 10.70659624183626 0.0 18 0.0 0.0 0.0 11.533695567585688 0.0 19 1.9954145373930708E-4 0.0 0.0 11.997828988983317 0.0 20 1.9954145373930708E-4 0.0 0.0 12.488501423728273 0.0 21 1.9954145373930708E-4 0.0 0.0 13.064976683581131 0.0 22 1.9954145373930708E-4 0.0 0.0 13.639456528896595 0.0 23 1.9954145373930708E-4 0.0 0.0 14.201365262626485 0.0 24 1.9954145373930708E-4 0.0 0.0 14.650732616447403 0.0 25 1.9954145373930708E-4 0.0 0.0 15.070168752207428 0.0 26 1.9954145373930708E-4 0.0 0.0 15.440517690347582 0.0 27 1.9954145373930708E-4 0.0 0.0 15.837605183288803 0.0 28 1.9954145373930708E-4 0.0 0.0 16.256642236141346 0.0 29 1.9954145373930708E-4 0.0 0.0 16.698826097627652 0.0 30 1.9954145373930708E-4 0.0 0.0 17.23220040347282 0.0 31 1.9954145373930708E-4 0.0 0.0 17.688551708174614 0.0 32 1.9954145373930708E-4 0.0 0.0 18.11557041917673 0.0 33 1.9954145373930708E-4 0.0 0.0 18.52183681898996 0.0 34 1.9954145373930708E-4 0.0 0.0 18.95444269069678 0.0 35 1.9954145373930708E-4 0.0 0.0 19.440126589098252 0.0 36 1.9954145373930708E-4 0.0 0.0 19.8404067452993 0.0 37 1.9954145373930708E-4 0.0 0.0 20.27600573881221 0.0 38 1.9954145373930708E-4 0.0 0.0 20.722779053734516 0.0 39 1.9954145373930708E-4 0.0 0.0 21.364903451867608 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAGTCG 20 7.0294726E-4 45.000004 27 CACGACC 40 6.8012014E-9 45.000004 27 AATGCGA 20 7.0294726E-4 45.000004 37 GTATGCG 30 2.1630422E-6 45.000004 1 GCAATCG 30 2.1630422E-6 45.000004 21 CGGTCAG 20 7.0294726E-4 45.000004 28 CGCAATC 30 2.1630422E-6 45.000004 20 TAAGCGA 20 7.0294726E-4 45.000004 1 CATGCGG 25 3.8876457E-5 45.0 2 GGGTTAC 25 3.8876457E-5 45.0 7 GCGTAAG 25 3.8876457E-5 45.0 1 CGTTTTT 2395 0.0 43.121086 1 TGCACGG 70 0.0 41.785713 2 ACAACGA 110 0.0 40.909092 13 TATGCGG 50 1.0786607E-9 40.5 2 ACACGAC 45 1.9244908E-8 40.0 26 GACGGGT 90 0.0 40.0 4 TACGGGA 85 0.0 39.705883 4 AAGGTCG 40 3.453024E-7 39.375004 1 CGTTTTA 225 0.0 39.0 1 >>END_MODULE