##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936718.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 653007 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.12506144650823 31.0 31.0 33.0 28.0 34.0 2 31.156159122337126 31.0 31.0 34.0 28.0 34.0 3 30.855323143549764 31.0 30.0 34.0 27.0 34.0 4 34.82721012179042 35.0 35.0 37.0 32.0 37.0 5 35.11850715229699 35.0 35.0 37.0 33.0 37.0 6 35.10065895158857 36.0 35.0 37.0 32.0 37.0 7 31.253433730419427 35.0 35.0 37.0 0.0 37.0 8 33.18037632062137 36.0 35.0 37.0 17.0 37.0 9 36.446347435785526 39.0 35.0 39.0 32.0 39.0 10 36.1350077411115 37.0 35.0 39.0 32.0 39.0 11 36.33349565931146 38.0 35.0 39.0 32.0 39.0 12 36.545986490190764 38.0 35.0 39.0 32.0 39.0 13 36.54676442978406 39.0 35.0 39.0 32.0 39.0 14 37.69228048091368 39.0 37.0 41.0 33.0 41.0 15 37.794698984850086 39.0 37.0 41.0 33.0 41.0 16 37.764910636486285 39.0 37.0 41.0 33.0 41.0 17 37.612108292866694 39.0 36.0 41.0 32.0 41.0 18 37.50777097335863 39.0 36.0 40.0 32.0 41.0 19 37.285306283087316 39.0 36.0 40.0 32.0 41.0 20 37.20250778322438 39.0 35.0 40.0 32.0 41.0 21 37.30330455875664 39.0 35.0 40.0 32.0 41.0 22 37.38011843670895 39.0 35.0 40.0 32.0 41.0 23 37.4269663265478 39.0 35.0 40.0 33.0 41.0 24 37.35995479374647 39.0 35.0 41.0 32.0 41.0 25 37.08193786590343 39.0 35.0 40.0 32.0 41.0 26 37.057382233268555 39.0 35.0 40.0 32.0 41.0 27 37.12088691239144 39.0 35.0 40.0 32.0 41.0 28 37.10703560605017 39.0 35.0 40.0 32.0 41.0 29 37.08970041668772 39.0 35.0 40.0 32.0 41.0 30 36.92871133081269 39.0 35.0 40.0 31.0 41.0 31 36.87584053463439 39.0 35.0 40.0 31.0 41.0 32 36.69241064797161 39.0 35.0 40.0 31.0 41.0 33 36.53276151710472 39.0 35.0 40.0 30.0 41.0 34 36.40366182904624 39.0 35.0 40.0 30.0 41.0 35 36.333074530594615 39.0 35.0 40.0 30.0 41.0 36 36.185884684237685 39.0 35.0 40.0 30.0 41.0 37 36.09658395698668 39.0 35.0 40.0 29.0 41.0 38 36.04463504985398 39.0 35.0 40.0 29.0 41.0 39 35.97466336501753 39.0 35.0 40.0 29.0 41.0 40 35.90437621648773 39.0 35.0 40.0 29.0 41.0 41 35.777138683046275 39.0 35.0 40.0 28.0 41.0 42 35.76266104344976 39.0 35.0 40.0 28.0 41.0 43 35.74723854415037 39.0 35.0 40.0 28.0 41.0 44 35.55443662931638 38.0 35.0 40.0 27.0 41.0 45 35.50768521623811 38.0 35.0 40.0 26.0 41.0 46 35.42894639720554 38.0 35.0 40.0 26.0 41.0 47 35.369633097348114 38.0 35.0 40.0 26.0 41.0 48 35.29754198653307 38.0 34.0 40.0 26.0 41.0 49 35.21956119919082 38.0 34.0 40.0 26.0 41.0 50 35.06826573068895 38.0 34.0 40.0 25.0 41.0 51 33.400980387652815 37.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 3.0 8 19.0 9 32.0 10 30.0 11 22.0 12 13.0 13 9.0 14 22.0 15 22.0 16 68.0 17 128.0 18 294.0 19 549.0 20 989.0 21 1508.0 22 2233.0 23 3256.0 24 4784.0 25 6786.0 26 8640.0 27 9553.0 28 10224.0 29 11406.0 30 13471.0 31 17151.0 32 22578.0 33 30741.0 34 44901.0 35 53855.0 36 64186.0 37 97401.0 38 134989.0 39 113140.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.95271107354132 21.026727125436633 25.924836946617724 13.095724854404317 2 32.39475227677498 27.008898832631196 25.89757843330929 14.698770457284532 3 28.923579685975803 26.625441993730544 29.94041411500949 14.51056420528417 4 25.483647189080667 24.902489559836265 32.54344899824964 17.07041425283343 5 26.99281937253353 28.056820217853712 27.561725984560653 17.388634425052103 6 24.863439442456205 34.939135415087435 26.97980266674017 13.217622475716187 7 68.38043083764799 15.669204158607794 12.776432718179132 3.1739322855650856 8 80.05947868858986 6.070991582019794 10.025619939755623 3.8439097896347203 9 74.6872545011003 6.509884273828612 11.440153015205045 7.36270820986605 10 35.83927890512659 35.02427998474749 17.550807265465764 11.585633844660165 11 23.46820171912399 25.952248597641375 33.46641000785596 17.113139675378672 12 22.2723493010029 23.288571179175722 35.529787582675226 18.909291937146154 13 21.097629887581604 25.553477987219125 36.39593449993645 16.952957625262822 14 18.887240106155065 29.11423614141962 32.15172272272732 19.846801029697996 15 17.768875371933227 28.181933731185115 36.988271182391614 17.060919714490044 16 21.02994301745617 27.42390204086633 31.465972033990447 20.080182907687057 17 20.95077081868954 27.03814813623744 31.47179126716865 20.539289777904372 18 21.03178067003876 25.959292932541306 32.85263404527058 20.156292352149364 19 20.847709136349227 28.509801579462398 30.494160093230242 20.148329190958137 20 21.27327884693426 27.256063104989686 33.55477046953555 17.915887578540506 21 21.827637376015876 28.17626763572213 31.93763619685547 18.058458791406522 22 20.688139637094245 24.190246046367037 32.839157926331566 22.28245639020715 23 20.080489183117486 27.377960726301552 32.39567110306628 20.14587898751468 24 20.881858846842377 26.300024348896716 31.809613066934965 21.00850373732594 25 19.181877070230488 30.223718888158935 29.872574107168838 20.721829934441743 26 19.7025453019646 28.868450108498074 30.231682049350162 21.197322540187166 27 19.687384668158227 29.285290969315795 30.405187080689792 20.622137281836185 28 17.36597004320015 28.71515925556694 33.633942668302176 20.284928032930736 29 19.6553788856781 26.77965167295297 32.77560577451696 20.789363666851962 30 19.210513822975862 28.233234865782446 33.08724102498136 19.46901028626033 31 21.76071619446652 28.729860476227664 28.86768441992199 20.641738909383818 32 23.00434757973498 28.6041344120354 28.527259278997008 19.864258729232613 33 20.53438937101746 27.732015123880753 28.83552549972665 22.898070005375136 34 21.634224441698173 29.65894699444263 28.917760452797598 19.789068111061596 35 22.065766523176627 26.625441993730544 30.06246487403657 21.246326609056258 36 22.455808283831566 29.578090280808627 28.906581399586834 19.05952003577297 37 21.071290200564466 28.10368035870978 31.916350054440457 18.908679386285293 38 21.005747258452054 28.899383926971687 28.118687854800946 21.976180959775316 39 22.454276906679407 28.49402839479516 29.199074435649237 19.852620262876204 40 22.059181601422342 27.107060108084603 29.62295963136689 21.210798659126166 41 20.99456820524129 29.200758950516608 28.957729396468952 20.846943447773146 42 22.5783184560043 26.617938245684964 30.587880374942383 20.215862923368356 43 23.42317923085051 26.41058977928261 28.22083071084996 21.945400279016916 44 20.77864402678685 27.168774607316614 29.539346438859 22.513234927037534 45 20.92106210193765 27.36923187653425 28.197706915852354 23.511999105675745 46 22.91920301007493 27.75544519430879 28.476417557545325 20.848934238070953 47 19.830415294169896 26.48792432546665 31.991081259465826 21.69057912089763 48 21.175883260056935 26.62467630515446 29.6480742166623 22.551366218126297 49 20.339291921832384 25.756232322165 32.30577926423454 21.59869649176808 50 21.093188893840342 25.22438503722012 30.54745201812538 23.134974050814154 51 20.319077743423883 25.405087541174904 29.573343011636933 24.702491703764277 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 190.0 1 396.5 2 603.0 3 4989.0 4 9375.0 5 6469.5 6 3564.0 7 3323.5 8 3083.0 9 3070.0 10 3057.0 11 3022.0 12 2987.0 13 2865.5 14 2744.0 15 2726.0 16 2708.0 17 2655.0 18 2602.0 19 2527.5 20 2453.0 21 2638.5 22 2824.0 23 3363.0 24 3902.0 25 4625.0 26 6745.0 27 8142.0 28 9635.5 29 11129.0 30 12556.5 31 13984.0 32 16302.5 33 18621.0 34 20686.5 35 22752.0 36 25359.0 37 27966.0 38 29934.5 39 31903.0 40 34131.5 41 36360.0 42 40166.5 43 43973.0 44 47788.5 45 51604.0 46 68722.5 47 85841.0 48 72567.0 49 59293.0 50 55993.5 51 52694.0 52 45733.0 53 38772.0 54 34281.5 55 29791.0 56 26300.5 57 22810.0 58 19962.0 59 17114.0 60 15274.0 61 13434.0 62 11258.0 63 9082.0 64 7225.5 65 5369.0 66 4135.5 67 2902.0 68 2445.0 69 1988.0 70 1505.5 71 1023.0 72 777.0 73 531.0 74 388.5 75 181.0 76 116.0 77 85.5 78 55.0 79 46.0 80 37.0 81 26.5 82 16.0 83 13.5 84 11.0 85 7.0 86 3.0 87 2.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 653007.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.09941243495438 #Duplication Level Percentage of deduplicated Percentage of total 1 74.59320766958756 26.181777608410563 2 8.991186600579509 6.3117073354675135 3 3.669293285530939 3.8637011512097774 4 2.2394391166056935 3.1441198870685256 5 1.5074117218994136 2.645463286811614 6 1.0985053094932584 2.3134134551934653 7 0.8560677362064246 2.103323218175692 8 0.6715753836474746 1.8857521097444343 9 0.5395908940609951 1.7045391003113382 >10 5.691584711331749 40.28375269391165 >50 0.11518793985857002 2.4918789733179985 >100 0.020864230605214584 1.3630347601737278 >500 0.003042700296593794 0.7179809247120621 >1k 0.0013040144128259115 1.246320903946629 >5k 0.0017386858837678822 3.7432345915449314 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC 6963 1.0662979110484267 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCG 6009 0.9202045307324423 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGC 5968 0.9139258844085898 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5595 0.8568055166330529 No Hit GAACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCT 4772 0.7307731770103536 No Hit GCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 2111 0.32327371682079975 Illumina Single End Adapter 2 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCT 1286 0.19693510176766862 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTC 940 0.14394945230296152 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTA 731 0.11194366982283499 No Hit GAATCTATCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC 728 0.11148425667718723 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09479224571865233 0.0 2 0.0 0.0 0.0 0.6730402583739531 0.0 3 0.0 0.0 0.0 0.8829920659349747 0.0 4 0.0 0.0 0.0 1.9272381459923094 0.0 5 0.0 0.0 0.0 3.643605658132302 0.0 6 0.0 0.0 0.0 4.2039365581073405 0.0 7 0.0 0.0 0.0 4.811740149799313 0.0 8 0.0 0.0 0.0 5.656600924645525 0.0 9 0.0 0.0 0.0 5.92229486054514 0.0 10 0.0 0.0 0.0 7.533456762331797 0.0 11 0.0 0.0 0.0 8.30557712245045 0.0 12 0.0 0.0 0.0 9.994992396712439 0.0 13 0.0 0.0 0.0 10.372783140150105 0.0 14 0.0 0.0 0.0 10.532199501689874 0.0 15 0.0 0.0 0.0 10.843834752154265 0.0 16 0.0 0.0 0.0 11.276601935354446 0.0 17 1.5313771521591651E-4 0.0 0.0 11.848724439401108 0.0 18 1.5313771521591651E-4 0.0 0.0 12.480417514666765 0.0 19 1.5313771521591651E-4 0.0 0.0 12.921300996773388 0.0 20 1.5313771521591651E-4 0.0 0.0 13.316243164315237 0.0 21 1.5313771521591651E-4 0.0 0.0 13.75191996410452 0.0 22 1.5313771521591651E-4 0.0 0.0 14.258346388323556 0.0 23 1.5313771521591651E-4 0.0 0.0 14.749612178736216 0.0 24 1.5313771521591651E-4 0.0 0.0 15.1439417954172 0.0 25 1.5313771521591651E-4 0.0 0.0 15.485898313494342 0.0 26 1.5313771521591651E-4 0.0 0.0 15.817288329221586 0.0 27 1.5313771521591651E-4 0.0 0.0 16.161695050742182 0.0 28 1.5313771521591651E-4 0.0 0.0 16.513452382593144 0.0 29 1.5313771521591651E-4 0.0 0.0 16.878838971098318 0.0 30 1.5313771521591651E-4 0.0 0.0 17.32661365038966 0.0 31 1.5313771521591651E-4 0.0 0.0 17.733500559718347 0.0 32 1.5313771521591651E-4 0.0 0.0 18.107462860275618 0.0 33 1.5313771521591651E-4 0.0 0.0 18.472083760204715 0.0 34 1.5313771521591651E-4 0.0 0.0 18.85523432367494 0.0 35 1.5313771521591651E-4 0.0 0.0 19.26549026273838 0.0 36 1.5313771521591651E-4 0.0 0.0 19.65813536455199 0.0 37 1.5313771521591651E-4 0.0 0.0 20.028422359944074 0.0 38 1.5313771521591651E-4 0.0 0.0 20.418770396029444 0.0 39 1.5313771521591651E-4 0.0 0.0 20.810649809266977 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 25 3.888948E-5 45.000004 1 CTACGCG 25 3.888948E-5 45.000004 1 CGACGGT 35 1.2108467E-7 45.0 28 CGCTAAG 20 7.031046E-4 45.0 2 TGTCGCG 20 7.031046E-4 45.0 1 TATTGCG 60 0.0 44.999996 1 CGTTTTT 3020 0.0 43.36093 1 GCGATTT 65 0.0 41.53846 9 GTTTGCG 55 6.002665E-11 40.909092 1 TCGCTCA 45 1.9261279E-8 40.0 11 GGACGAT 45 1.9261279E-8 40.0 8 GGATCGC 85 0.0 39.705883 8 CTATGCG 40 3.4551704E-7 39.375 1 CTCACGA 40 3.4551704E-7 39.375 24 CGGTCTA 40 3.4551704E-7 39.375 31 GCGGGCT 75 0.0 39.0 5 TACGGCT 745 0.0 38.959732 7 AACGGCT 110 0.0 38.86364 7 ACCGGCG 35 6.244145E-6 38.571426 20 CCAGCGG 35 6.244145E-6 38.571426 2 >>END_MODULE