##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936715.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 542360 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.091160852570248 31.0 31.0 33.0 28.0 34.0 2 31.138212626299875 31.0 31.0 34.0 28.0 34.0 3 30.89483000221255 31.0 31.0 34.0 27.0 34.0 4 34.842294785751164 35.0 35.0 37.0 32.0 37.0 5 35.10456154583672 35.0 35.0 37.0 33.0 37.0 6 35.070969466774834 35.0 35.0 37.0 32.0 37.0 7 31.056350025813114 35.0 35.0 37.0 0.0 37.0 8 33.0300298694594 35.0 35.0 37.0 17.0 37.0 9 36.24934360941072 39.0 35.0 39.0 32.0 39.0 10 35.93181281805443 37.0 35.0 39.0 32.0 39.0 11 36.238325097721074 37.0 35.0 39.0 32.0 39.0 12 36.416962902868946 38.0 35.0 39.0 32.0 39.0 13 36.348180175529166 38.0 35.0 39.0 32.0 39.0 14 37.46959215281363 39.0 36.0 40.0 32.0 41.0 15 37.56477985102146 39.0 36.0 41.0 32.0 41.0 16 37.579611328269046 39.0 36.0 40.0 33.0 41.0 17 37.41495501143152 39.0 36.0 40.0 32.0 41.0 18 37.31584372003835 39.0 36.0 40.0 32.0 41.0 19 37.107340143078396 39.0 36.0 40.0 32.0 41.0 20 37.03791208791209 39.0 35.0 40.0 32.0 41.0 21 37.16196622169777 39.0 35.0 40.0 32.0 41.0 22 37.25045357327237 39.0 35.0 40.0 32.0 41.0 23 37.301403127074266 39.0 35.0 40.0 32.0 41.0 24 37.20286525554982 39.0 35.0 40.0 32.0 41.0 25 36.94479128254296 39.0 35.0 40.0 31.0 41.0 26 36.9054207537429 39.0 35.0 40.0 31.0 41.0 27 36.99104284976768 39.0 35.0 40.0 32.0 41.0 28 36.99479865771812 39.0 35.0 40.0 31.0 41.0 29 36.97710376871451 39.0 35.0 40.0 31.0 41.0 30 36.783724832214766 39.0 35.0 40.0 31.0 41.0 31 36.769951692602696 39.0 35.0 40.0 31.0 41.0 32 36.58770005162623 39.0 35.0 40.0 30.0 41.0 33 36.44205509255845 39.0 35.0 40.0 30.0 41.0 34 36.295217198908475 39.0 35.0 40.0 30.0 41.0 35 36.2551607788185 39.0 35.0 40.0 30.0 41.0 36 36.17973301865919 39.0 35.0 40.0 30.0 41.0 37 36.048875285788036 39.0 35.0 40.0 29.0 41.0 38 36.00328748432775 39.0 35.0 40.0 29.0 41.0 39 35.92882034073309 38.0 35.0 40.0 29.0 41.0 40 35.87765875064533 38.0 35.0 40.0 29.0 41.0 41 35.72421454384541 38.0 35.0 40.0 28.0 41.0 42 35.70839663692013 38.0 35.0 40.0 28.0 41.0 43 35.70011984659636 38.0 35.0 40.0 28.0 41.0 44 35.50687550704329 38.0 35.0 40.0 27.0 41.0 45 35.488870860682944 38.0 35.0 40.0 27.0 41.0 46 35.391356294712 38.0 34.0 40.0 27.0 41.0 47 35.31442031123239 38.0 34.0 40.0 26.0 41.0 48 35.277365587432705 38.0 34.0 40.0 26.0 41.0 49 35.171483885242274 38.0 34.0 40.0 26.0 41.0 50 35.013039309683606 38.0 34.0 40.0 26.0 41.0 51 33.26541964746663 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 33.0 10 31.0 11 31.0 12 12.0 13 15.0 14 15.0 15 29.0 16 67.0 17 108.0 18 272.0 19 443.0 20 837.0 21 1242.0 22 1817.0 23 2667.0 24 3728.0 25 5441.0 26 6728.0 27 7720.0 28 8439.0 29 9760.0 30 12025.0 31 15286.0 32 20554.0 33 27725.0 34 40614.0 35 47072.0 36 54920.0 37 80103.0 38 108182.0 39 86429.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.427354524669965 20.319160705066746 24.48871598200457 12.76476878825872 2 31.65757061730216 27.47086805811638 25.17423851316469 15.697322811416772 3 28.9173242864518 26.436868500626893 28.96507854561546 15.680728667305848 4 26.061472084962016 23.93189025739361 32.85953978906999 17.147097868574377 5 26.60631314993731 28.206910539125303 27.21384320377609 17.972933107161296 6 23.62102662438233 36.36108857585368 27.119625341101848 12.898259458662142 7 66.09668854635298 16.89265432554023 13.453241389483 3.5574157386237926 8 77.67552916881776 7.675529168817759 10.545025444354303 4.103916218010178 9 72.9297883324729 5.803894092484697 11.732428645180324 9.533888929862085 10 38.49896747547754 24.77819160705067 20.992329817833173 15.730511099638617 11 27.27395088133343 25.554797551441848 28.459879047127366 18.711372520097353 12 24.39873884504757 22.66041005973892 32.435835976104435 20.50501511910908 13 21.316468766133195 24.504388229220446 35.6582343830666 18.520908621579764 14 19.100966147946014 28.156021830518473 31.406261523711187 21.336750497824323 15 18.198613467069844 26.214691348919537 37.237259384910395 18.349435799100227 16 20.250940334832954 26.435946603731843 30.794306364776165 22.51880669665905 17 21.081753816653144 25.38940924846965 31.982815841876246 21.54602109300096 18 20.971126189246995 25.55682572461096 32.863596135408216 20.60845195073383 19 21.75307913562947 27.72955232686776 29.498856847850135 21.01851168965263 20 21.696659045652332 26.769304520982374 33.18220370233793 18.35183273102736 21 21.37270447673132 29.20182166826462 30.808319197580943 18.617154657423114 22 20.88778670993436 23.83472232465521 31.247879637141384 24.029611328269045 23 19.329965336676747 28.441441109226346 31.371413821078253 20.85717973301866 24 21.3057747621506 24.805110996386166 31.20952872630725 22.679585515155985 25 18.970056788848737 30.273250239693194 29.94837377387713 20.808319197580943 26 18.918246183346852 26.519470462423484 31.946861862969243 22.615421491260417 27 20.157828748432774 27.473818128180543 30.20576738697544 22.162585736411238 28 16.786451803230324 26.103879342134377 35.761855594070354 21.347813260564937 29 20.01364407404676 24.510841507485804 33.18386311674902 22.291651301718414 30 18.887639206431153 27.016926026993143 31.662180101777416 22.433254664798287 31 21.006895788774983 26.368463751014087 30.764990043513535 21.859650416697395 32 21.4801976546943 28.68039678442363 29.27465152297367 20.5647540379084 33 20.486761560587063 26.069400398259457 28.368795633896305 25.07504240725717 34 20.14787226196622 27.056383214101338 31.593775352164617 21.20196917176783 35 21.067187845711334 25.55811638026403 28.504683236226857 24.870012537797773 36 22.098421712515673 25.927981414558598 30.830629102441183 21.14296777048455 37 19.591968434250315 28.23807065417804 30.93572534847703 21.23423556309462 38 20.346817611918283 27.072239840696216 29.22247215871377 23.35847038867173 39 21.118260933697176 28.37137694520245 29.178774245888338 21.331587875212037 40 21.6708459325909 25.67280035400841 29.88420974998156 22.77214396341913 41 21.005051994984882 27.472711851906485 28.756729847333872 22.765506305774764 42 21.993141087100817 24.417176782948598 31.798436462865993 21.791245667084596 43 22.88332472896231 25.119662216977652 28.5773287115569 23.419684342503132 44 20.391806180396784 25.39715318238808 30.228630429972714 23.98241020724242 45 19.98432775278413 25.591489047864886 29.139132679401136 25.28505051994985 46 23.141271480197656 27.396010030238216 28.141640238955674 21.32107825060845 47 18.589128991813556 25.213695700272883 33.97595692897706 22.2212183789365 48 21.301534036433363 26.036396489416624 29.599343609410724 23.062725864739285 49 20.11081200678516 23.551699977874474 33.27089018364186 23.066597831698502 50 20.044619809720484 24.518954200162256 31.493657349362046 23.94276864075522 51 20.02065049044915 24.10446935614721 28.920827494652997 26.954052658750644 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 144.0 1 410.0 2 676.0 3 3959.0 4 7242.0 5 4933.5 6 2625.0 7 2469.5 8 2314.0 9 2222.0 10 2130.0 11 2042.5 12 1955.0 13 1900.0 14 1845.0 15 1801.0 16 1757.0 17 1713.5 18 1670.0 19 1753.5 20 1837.0 21 2028.0 22 2219.0 23 2404.0 24 2589.0 25 3219.5 26 4595.0 27 5340.0 28 6421.0 29 7502.0 30 8910.5 31 10319.0 32 12225.5 33 14132.0 34 16530.5 35 18929.0 36 19915.0 37 20901.0 38 22360.5 39 23820.0 40 26147.0 41 28474.0 42 31343.5 43 34213.0 44 37108.0 45 40003.0 46 56627.0 47 73251.0 48 61918.5 49 50586.0 50 48438.5 51 46291.0 52 39715.5 53 33140.0 54 29562.0 55 25984.0 56 23444.0 57 20904.0 58 18486.0 59 16068.0 60 14580.5 61 13093.0 62 11329.0 63 9565.0 64 7943.0 65 6321.0 66 5031.0 67 3741.0 68 3177.5 69 2614.0 70 2171.0 71 1728.0 72 1406.5 73 1085.0 74 931.5 75 525.0 76 272.0 77 241.0 78 210.0 79 170.5 80 131.0 81 93.5 82 56.0 83 38.0 84 20.0 85 16.0 86 12.0 87 9.5 88 7.0 89 6.5 90 6.0 91 6.0 92 6.0 93 4.5 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 542360.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.48334099806127 #Duplication Level Percentage of deduplicated Percentage of total 1 75.23715489765607 27.44902777855142 2 9.359139648080761 6.829053664588111 3 3.749173772494389 4.103471556087018 4 2.1384105218593574 3.120654410513484 5 1.438012350205942 2.6231747465993447 6 0.9532953315590292 2.0867639191876766 7 0.7440521797529338 1.9001856575993947 8 0.579524068966327 1.6914379379745992 9 0.49505848468985564 1.625524875983115 >10 5.187439540227165 38.887856466252074 >50 0.09318773012034076 2.1449811767770774 >100 0.018036334861979333 1.1778661016734142 >500 0.003507065112051537 0.8684112118327734 >1k 0.002505046508608241 1.8788463158133186 >5k 0.0015030279051649444 3.612744180567199 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCG 6946 1.2806991666052068 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGC 6934 1.2784866140570839 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTC 5885 1.08507264547533 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4075 0.7513459694667749 No Hit GCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 2352 0.43366029943211154 Illumina Single End Adapter 2 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCT 1418 0.2614499594365366 No Hit GAACTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCT 1367 0.25204661110701376 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTC 1067 0.19673279740393834 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCTACAGGTCGTA 911 0.16796961427833912 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCG 738 0.13607198170956558 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 687 0.12666863338004278 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGC 683 0.12593111586400177 No Hit CTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGCT 597 0.11007448926912014 Illumina Single End Adapter 2 (95% over 22bp) GAATCTATCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTC 586 0.10804631610000738 No Hit CCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 549 0.10122427907662808 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12482483958994026 0.0 2 0.0 0.0 0.0 0.8741426358876023 0.0 3 0.0 0.0 0.0 1.0898665093295965 0.0 4 0.0 0.0 0.0 1.6308356073456745 0.0 5 0.0 0.0 0.0 3.4696511542149127 0.0 6 0.0 0.0 0.0 3.9636035105833765 0.0 7 0.0 0.0 0.0 4.6402758315509995 0.0 8 0.0 0.0 0.0 5.580795043882293 0.0 9 0.0 0.0 0.0 5.847960764068147 0.0 10 0.0 0.0 0.0 7.965557932000885 0.0 11 0.0 0.0 0.0 8.932074636772624 0.0 12 0.0 0.0 0.0 11.127295523268678 0.0 13 0.0 0.0 0.0 11.483516483516484 0.0 14 1.843793790102515E-4 0.0 0.0 11.668817759421787 0.0 15 1.843793790102515E-4 0.0 0.0 12.10339995574895 0.0 16 1.843793790102515E-4 0.0 0.0 12.673316616269636 0.0 17 1.843793790102515E-4 0.0 0.0 13.377092705951766 0.0 18 1.843793790102515E-4 0.0 0.0 14.112397669444649 0.0 19 1.843793790102515E-4 0.0 0.0 14.64064459030902 0.0 20 1.843793790102515E-4 0.0 0.0 15.099196105907515 0.0 21 1.843793790102515E-4 0.0 0.0 15.66745335201711 0.0 22 1.843793790102515E-4 0.0 0.0 16.249723430931486 0.0 23 1.843793790102515E-4 0.0 0.0 16.850062688988864 0.0 24 1.843793790102515E-4 0.0 0.0 17.3237333136662 0.0 25 1.843793790102515E-4 0.0 0.0 17.754627922413157 0.0 26 1.843793790102515E-4 0.0 0.0 18.152703001696292 0.0 27 1.843793790102515E-4 0.0 0.0 18.576406814661848 0.0 28 1.843793790102515E-4 0.0 0.0 19.020392359318535 0.0 29 1.843793790102515E-4 0.0 0.0 19.48097204808614 0.0 30 1.843793790102515E-4 0.0 0.0 19.993546721734642 0.0 31 3.68758758020503E-4 0.0 0.0 20.465004793863855 0.0 32 3.68758758020503E-4 0.0 0.0 20.898296334537946 0.0 33 3.68758758020503E-4 0.0 0.0 21.343941293605724 0.0 34 3.68758758020503E-4 0.0 0.0 21.80968360498562 0.0 35 3.68758758020503E-4 0.0 0.0 22.27192270816432 0.0 36 3.68758758020503E-4 0.0 0.0 22.72180839294933 0.0 37 3.68758758020503E-4 0.0 0.0 23.19658529390073 0.0 38 3.68758758020503E-4 0.0 0.0 23.649421048749907 0.0 39 3.68758758020503E-4 0.0 0.0 24.132863780514786 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATT 25 3.888072E-5 45.0 12 CAGCGCG 20 7.029988E-4 45.0 1 CGACGGT 40 6.8030204E-9 45.0 28 GCGGTCT 20 7.029988E-4 45.0 36 ACGTTAC 20 7.029988E-4 45.0 36 GGCACGT 20 7.029988E-4 45.0 8 CGGATAG 25 3.888072E-5 45.0 2 CGGTCTA 55 1.8189894E-12 45.0 31 CCAACGG 25 3.888072E-5 45.0 2 GATTACC 20 7.029988E-4 45.0 32 CGAATAT 120 0.0 43.124996 14 CGTTTTT 2025 0.0 43.0 1 TACGGCT 805 0.0 42.763973 7 AGGCGAT 100 0.0 42.75 7 CTACGAA 130 0.0 41.53846 11 ACGGCTG 900 0.0 41.5 8 TGATACC 865 0.0 40.578033 4 AAACGGC 95 0.0 40.263157 6 GATACCT 900 0.0 39.0 5 CGGCTGT 960 0.0 38.67187 9 >>END_MODULE