##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936714.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 528640 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.103117433414045 31.0 31.0 33.0 28.0 34.0 2 31.15363006961259 31.0 31.0 34.0 28.0 34.0 3 30.923847987288134 31.0 31.0 34.0 27.0 34.0 4 34.899144975786925 35.0 35.0 37.0 32.0 37.0 5 35.16344960653753 35.0 35.0 37.0 33.0 37.0 6 35.163107218523 36.0 35.0 37.0 32.0 37.0 7 31.002759912227603 35.0 35.0 37.0 0.0 37.0 8 33.08130864104116 36.0 35.0 37.0 17.0 37.0 9 36.32572071731235 39.0 35.0 39.0 32.0 39.0 10 36.155264452179175 37.0 35.0 39.0 32.0 39.0 11 36.426235245157386 38.0 35.0 39.0 32.0 39.0 12 36.48294680690073 38.0 35.0 39.0 32.0 39.0 13 36.41285184624697 38.0 35.0 39.0 32.0 39.0 14 37.47979721549637 39.0 36.0 40.0 32.0 41.0 15 37.67940186138014 39.0 36.0 41.0 33.0 41.0 16 37.557513619854724 39.0 36.0 41.0 33.0 41.0 17 37.48063899818402 39.0 36.0 40.0 32.0 41.0 18 37.39541275726392 39.0 36.0 40.0 32.0 41.0 19 37.17930349576271 39.0 36.0 40.0 32.0 41.0 20 37.16990390435836 39.0 35.0 40.0 32.0 41.0 21 37.15270316283293 39.0 35.0 40.0 32.0 41.0 22 37.24476392251816 39.0 35.0 40.0 32.0 41.0 23 37.311747124697334 39.0 35.0 40.0 32.0 41.0 24 37.22446655569007 39.0 35.0 40.0 32.0 41.0 25 36.88421988498789 39.0 35.0 40.0 31.0 41.0 26 36.847981613196126 39.0 35.0 40.0 31.0 41.0 27 36.84527088377724 39.0 35.0 40.0 31.0 41.0 28 36.82145316283293 39.0 35.0 40.0 31.0 41.0 29 36.84107521186441 39.0 35.0 40.0 31.0 41.0 30 36.58172101997579 38.0 35.0 40.0 31.0 41.0 31 36.470915935230025 38.0 35.0 40.0 30.0 41.0 32 36.33595830811138 38.0 35.0 40.0 30.0 41.0 33 36.175160789951576 38.0 35.0 40.0 30.0 41.0 34 36.06078616828087 38.0 35.0 40.0 30.0 41.0 35 35.98260820217918 38.0 35.0 40.0 29.0 41.0 36 35.89595755145278 38.0 35.0 40.0 29.0 41.0 37 35.79782082324455 38.0 35.0 40.0 29.0 41.0 38 35.71891646489104 38.0 35.0 40.0 29.0 41.0 39 35.71396791767555 38.0 35.0 40.0 28.0 41.0 40 35.59867017251816 38.0 35.0 40.0 28.0 41.0 41 35.445233050847456 38.0 34.0 40.0 27.0 41.0 42 35.42121292372882 38.0 34.0 40.0 27.0 41.0 43 35.3308508625908 38.0 34.0 40.0 27.0 41.0 44 35.095043886198546 38.0 34.0 40.0 26.0 41.0 45 35.00556900726392 38.0 34.0 40.0 25.0 41.0 46 34.84123600181598 38.0 34.0 40.0 24.0 41.0 47 34.80229456719128 37.0 34.0 40.0 24.0 41.0 48 34.73207664951574 37.0 34.0 40.0 24.0 41.0 49 34.60840647699758 37.0 34.0 40.0 24.0 41.0 50 34.43819612590799 37.0 33.0 40.0 24.0 41.0 51 32.8713718220339 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 17.0 9 32.0 10 41.0 11 27.0 12 23.0 13 19.0 14 28.0 15 38.0 16 72.0 17 110.0 18 275.0 19 476.0 20 737.0 21 1207.0 22 1751.0 23 2540.0 24 3806.0 25 5417.0 26 6976.0 27 8080.0 28 9132.0 29 10422.0 30 12316.0 31 15531.0 32 20064.0 33 27916.0 34 43125.0 35 47207.0 36 53703.0 37 79318.0 38 101918.0 39 76311.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.77444007263922 21.667864709443098 23.413097760290558 14.14459745762712 2 33.34707929782083 23.872011198547217 24.94173728813559 17.83917221549637 3 32.16044945520581 22.873600181598064 28.893386803874094 16.072563559322035 4 29.15802814769976 25.107634685230025 27.181446731234864 18.55289043583535 5 24.74273607748184 29.85301906779661 26.07464437046005 19.3296004842615 6 26.11209897094431 34.34095036319613 25.61138014527845 13.935570520581114 7 67.67308565375303 18.351619249394673 10.118606234866828 3.8566888619854724 8 78.18193855932203 5.936743341404358 10.818704600484262 5.0626134987893465 9 71.15976846246973 8.841366525423728 13.66260593220339 6.336259079903147 10 39.98675847457627 25.997843523002423 20.38192342615012 13.633474576271187 11 31.57536319612591 25.480478208232444 25.51112288135593 17.43303571428571 12 30.35317039951574 22.129426452784504 29.360623486682808 18.15677966101695 13 25.067153450363193 25.315337469733656 29.332627118644066 20.284881961259078 14 19.17751210653753 27.845225484261498 30.1089588377724 22.868303571428573 15 18.19026180387409 26.57498486682809 35.769332627118644 19.465420702179177 16 20.933905871670703 24.677285108958838 33.62193553268765 20.766873486682808 17 20.85483504842615 24.37102754237288 30.437537832929785 24.336599576271187 18 23.206529963680385 25.5050696125908 30.567872276029057 20.720528147699756 19 24.747086864406782 27.079865314769975 28.112136803874094 20.060911016949152 20 27.326536016949156 25.31420248184019 28.655796004842614 18.70346549636804 21 24.215912530266344 26.564959140435835 29.15273153753027 20.066396791767556 22 21.40757415254237 25.68477602905569 28.212204903147697 24.695444915254235 23 22.769181295399516 25.90609866828087 29.994325060532688 21.330394975786927 24 23.094544491525422 23.09681446731235 30.685911016949152 23.122730024213077 25 21.567985774818403 26.15201271186441 28.195747578692494 24.084253934624698 26 20.714474878934624 28.33554025423729 28.833799939467315 22.116184927360774 27 21.23013771186441 28.291086561743338 28.965458535108958 21.513317191283292 28 18.269143462469735 29.391078995157383 31.06253783292978 21.277239709443098 29 20.398380750605327 27.594960653753027 29.98921761501211 22.01744098062954 30 21.42838226392252 26.39206265133172 29.55205811138015 22.62749697336562 31 21.6587848062954 29.176566283292978 26.421004842615016 22.74364406779661 32 22.599878934624698 28.06068401937046 27.414119249394673 21.92531779661017 33 21.699644370460046 28.163022094430996 25.909881961259078 24.22745157384988 34 19.940791464891042 28.200665859564168 28.76361985472155 23.094922820823243 35 19.952898002421307 26.080319309927365 28.58485926150121 25.38192342615012 36 19.87988044794189 30.273342917675546 25.99822185230024 23.848554782082324 37 20.039346246973366 29.74406023002421 27.5599651937046 22.65662832929782 38 20.007188256658594 28.037984261501208 26.813899818401936 25.140927663438255 39 21.578578995157386 24.06174334140436 28.21182657384988 26.147851089588375 40 21.840950363196125 24.286849273607746 29.234639830508474 24.63756053268765 41 18.06560230024213 27.239520278450364 27.760479721549636 26.934397699757866 42 20.832513619854723 27.378556295399513 26.425166464891042 25.363763619854723 43 21.8422745157385 26.012976694915253 27.452141343825666 24.692607445520583 44 20.49542221549637 27.346587469733656 27.05243644067797 25.105553874092006 45 21.1537151937046 25.214512711864405 26.844922820823246 26.78684927360775 46 20.508474576271183 27.254653450363197 26.889565677966104 25.347306295399513 47 19.823320217917676 26.717236682808714 28.800696125907994 24.658746973365616 48 19.530304176755447 25.117282082324454 29.003669794188863 26.348743946731233 49 19.9636803874092 24.75805841404358 29.87496216707022 25.403299031477 50 18.51940829297821 25.393651634382568 29.769408292978206 26.317531779661017 51 18.183073547215496 24.48093220338983 27.771451271186443 29.56454297820823 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 185.0 1 580.0 2 975.0 3 4070.5 4 7166.0 5 4862.0 6 2558.0 7 2378.0 8 2198.0 9 2122.0 10 2046.0 11 2013.5 12 1981.0 13 1984.5 14 1988.0 15 1851.5 16 1715.0 17 1708.0 18 1701.0 19 1721.0 20 1741.0 21 2025.5 22 2310.0 23 2365.0 24 2420.0 25 2868.0 26 3823.5 27 4331.0 28 5654.0 29 6977.0 30 8108.0 31 9239.0 32 10386.5 33 11534.0 34 13356.5 35 15179.0 36 16374.5 37 17570.0 38 18755.5 39 19941.0 40 22176.0 41 24411.0 42 27515.0 43 30619.0 44 33189.5 45 35760.0 46 39539.0 47 43318.0 48 45884.5 49 48451.0 50 46583.0 51 44715.0 52 38647.5 53 32580.0 54 29247.5 55 25915.0 56 25230.0 57 24545.0 58 24014.0 59 23483.0 60 23037.5 61 22592.0 62 21297.0 63 20002.0 64 16776.0 65 13550.0 66 10283.5 67 7017.0 68 5872.5 69 4728.0 70 4075.0 71 3422.0 72 2988.5 73 2555.0 74 2110.0 75 1342.5 76 1020.0 77 817.5 78 615.0 79 431.0 80 247.0 81 214.0 82 181.0 83 133.5 84 86.0 85 62.0 86 38.0 87 31.5 88 25.0 89 21.5 90 18.0 91 13.0 92 8.0 93 4.0 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 528640.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.016732359613826 #Duplication Level Percentage of deduplicated Percentage of total 1 74.35696883617976 25.293811079724733 2 9.742028557474939 6.627839561586795 3 3.779436539417058 3.856922436944854 4 2.1949656809042857 2.9866224042343443 5 1.3774636179956181 2.3428405614231145 6 1.0103455191151784 2.0621191868685673 7 0.7057658825666611 1.6805494395071725 8 0.5254901511443094 1.4300366263271196 9 0.4361190669931957 1.3351811020948825 >10 5.604687600249804 43.729797234418996 >50 0.2223662115003115 4.711667974534435 >100 0.0415896904302325 2.3903537742533416 >500 0.0011090584114728669 0.2897398514246475 >1k 0.0016635876172093 1.2625187666570088 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4009 0.7583610774818402 No Hit GCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 1630 0.30833837772397094 TruSeq Adapter, Index 16 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 1054 0.19937953995157387 TruSeq Adapter, Index 16 (95% over 22bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 804 0.15208837772397094 No Hit CTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGCT 732 0.1384685230024213 TruSeq Adapter, Index 19 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8916464891041162E-4 0.0 0.0 0.17195066585956417 0.0 2 1.8916464891041162E-4 0.0 0.0 0.9864936440677966 0.0 3 1.8916464891041162E-4 0.0 0.0 1.2528374697336562 0.0 4 1.8916464891041162E-4 0.0 0.0 1.6419491525423728 0.0 5 1.8916464891041162E-4 0.0 0.0 2.7218901331719128 0.0 6 1.8916464891041162E-4 0.0 0.0 3.3035714285714284 0.0 7 1.8916464891041162E-4 0.0 0.0 3.9172215496368037 0.0 8 1.8916464891041162E-4 0.0 0.0 5.023834745762712 0.0 9 1.8916464891041162E-4 0.0 0.0 5.426755447941889 0.0 10 1.8916464891041162E-4 0.0 0.0 6.383739406779661 0.0 11 1.8916464891041162E-4 0.0 0.0 7.632793583535109 0.0 12 1.8916464891041162E-4 0.0 0.0 8.685116525423728 0.0 13 1.8916464891041162E-4 0.0 0.0 9.12681598062954 0.0 14 1.8916464891041162E-4 0.0 0.0 9.302928268765132 0.0 15 1.8916464891041162E-4 0.0 0.0 9.6330205811138 0.0 16 1.8916464891041162E-4 0.0 0.0 10.337280569007264 0.0 17 1.8916464891041162E-4 0.0 0.0 11.149931900726392 0.0 18 1.8916464891041162E-4 0.0 0.0 12.0494098062954 0.0 19 1.8916464891041162E-4 0.0 0.0 12.539724576271187 0.0 20 1.8916464891041162E-4 0.0 0.0 13.029661016949152 0.0 21 1.8916464891041162E-4 0.0 0.0 13.636312046004843 0.0 22 1.8916464891041162E-4 0.0 0.0 14.272283595641646 0.0 23 1.8916464891041162E-4 0.0 0.0 14.888392857142858 0.0 24 1.8916464891041162E-4 0.0 0.0 15.379085956416464 0.0 25 1.8916464891041162E-4 0.0 0.0 15.834216101694915 0.0 26 1.8916464891041162E-4 0.0 0.0 16.250189164648912 0.0 27 1.8916464891041162E-4 0.0 0.0 16.648380750605327 0.0 28 1.8916464891041162E-4 0.0 0.0 17.090458535108958 0.0 29 1.8916464891041162E-4 0.0 0.0 17.534427966101696 0.0 30 1.8916464891041162E-4 0.0 0.0 18.05973819612591 0.0 31 1.8916464891041162E-4 0.0 0.0 18.54381053268765 0.0 32 1.8916464891041162E-4 0.0 0.0 19.011614709443098 0.0 33 1.8916464891041162E-4 0.0 0.0 19.495687046004843 0.0 34 1.8916464891041162E-4 0.0 0.0 19.924334140435835 0.0 35 1.8916464891041162E-4 0.0 0.0 20.430917070217916 0.0 36 1.8916464891041162E-4 0.0 0.0 20.930879237288135 0.0 37 1.8916464891041162E-4 0.0 0.0 21.39263014527845 0.0 38 1.8916464891041162E-4 0.0 0.0 21.831113801452783 0.0 39 1.8916464891041162E-4 0.0 0.0 22.289081416464892 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 20 7.0298254E-4 45.0 26 ATGGGCC 55 1.8189894E-12 45.0 5 GTCGACT 20 7.0298254E-4 45.0 43 GCGAATG 25 3.887937E-5 45.0 1 GCGCGTT 25 3.887937E-5 45.0 1 TTAGCGT 20 7.0298254E-4 45.0 14 ACGTTAG 20 7.0298254E-4 45.0 1 ACCGAAC 20 7.0298254E-4 45.0 24 CACGACA 20 7.0298254E-4 45.0 35 AGGCGAT 105 0.0 45.0 7 TCGATAG 25 3.887937E-5 45.0 1 CCCGTGC 20 7.0298254E-4 45.0 44 CAAGGCG 25 3.887937E-5 45.0 5 AACGCAT 20 7.0298254E-4 45.0 22 TTGCGAA 20 7.0298254E-4 45.0 10 TATAGCG 20 7.0298254E-4 45.0 1 CCGGTTG 20 7.0298254E-4 45.0 2 TAGTGCG 25 3.887937E-5 45.0 1 GCTCGAT 20 7.0298254E-4 45.0 12 CGTTTTA 100 0.0 45.0 1 >>END_MODULE