SRR2936713.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936713.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	399101
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3855	0.9659209072390197	No Hit
GCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC	1331	0.3334995402166369	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGC	924	0.23152034196857438	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCG	895	0.22425401088947408	No Hit
CCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC	892	0.22350232146749818	No Hit
CTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGCT	743	0.18616841350936228	Illumina Single End Adapter 1 (95% over 21bp)
GAATCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTC	724	0.1814077138368483	No Hit
TCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTCTGC	582	0.1458277478633228	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGACGG	30	2.1619271E-6	45.000004	2
CACGGTT	20	7.0277473E-4	45.0	30
GTCGAAA	20	7.0277473E-4	45.0	18
CGAAAGA	20	7.0277473E-4	45.0	20
CGTGCGG	20	7.0277473E-4	45.0	2
GCGAAAA	20	7.0277473E-4	45.0	1
GGCGTTA	20	7.0277473E-4	45.0	8
TAGCGCG	20	7.0277473E-4	45.0	1
ATGCTCG	20	7.0277473E-4	45.0	1
TCAATCA	20	7.0277473E-4	45.0	13
TACGCGG	20	7.0277473E-4	45.0	1
TCGTGAA	20	7.0277473E-4	45.0	11
CTACGAT	20	7.0277473E-4	45.0	18
TATAGCG	25	3.886214E-5	45.0	1
GGCGCGT	20	7.0277473E-4	45.0	10
ATAGTAC	20	7.0277473E-4	45.0	29
CGATATC	20	7.0277473E-4	45.0	34
TCGAATT	20	7.0277473E-4	45.0	14
TAGTCGG	20	7.0277473E-4	45.0	2
CGTTTTT	2625	0.0	43.800003	1