##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936712.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 261056 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.923847756803138 31.0 30.0 33.0 28.0 34.0 2 30.975315641088503 31.0 31.0 33.0 28.0 34.0 3 30.66609463103702 31.0 30.0 33.0 27.0 34.0 4 34.648952715126256 35.0 35.0 37.0 32.0 37.0 5 34.94675854988968 35.0 35.0 37.0 32.0 37.0 6 34.91073562760481 35.0 35.0 37.0 32.0 37.0 7 31.12454798970336 35.0 35.0 37.0 0.0 37.0 8 32.90282544741358 35.0 33.0 37.0 17.0 37.0 9 35.75998253248345 37.0 34.0 39.0 31.0 39.0 10 35.90634193429762 37.0 35.0 39.0 32.0 39.0 11 36.113033218926205 37.0 35.0 39.0 32.0 39.0 12 36.14172821157146 37.0 35.0 39.0 32.0 39.0 13 35.80655491542045 37.0 35.0 39.0 30.0 39.0 14 36.936998191958814 39.0 35.0 40.0 31.0 41.0 15 36.99415451090954 39.0 35.0 40.0 31.0 41.0 16 37.17185584702133 39.0 35.0 40.0 32.0 41.0 17 36.91810952439323 38.0 35.0 40.0 31.0 41.0 18 36.809397217455256 38.0 35.0 40.0 31.0 41.0 19 36.515023596469725 38.0 35.0 40.0 31.0 41.0 20 36.35744821034567 38.0 35.0 40.0 30.0 41.0 21 36.5855180497671 38.0 35.0 40.0 31.0 41.0 22 36.64879183010542 38.0 35.0 40.0 31.0 41.0 23 36.723741266241724 38.0 35.0 40.0 32.0 41.0 24 36.523891425594506 38.0 35.0 40.0 31.0 41.0 25 36.39701826428046 38.0 35.0 40.0 31.0 41.0 26 36.24131987006619 38.0 35.0 40.0 30.0 41.0 27 36.301965861730814 38.0 35.0 40.0 31.0 41.0 28 36.25176207403776 38.0 35.0 40.0 30.0 41.0 29 36.09781426207404 38.0 35.0 40.0 30.0 41.0 30 35.98417963961755 38.0 35.0 40.0 30.0 41.0 31 35.95720841505271 38.0 35.0 40.0 30.0 41.0 32 35.44634101495465 38.0 34.0 40.0 28.0 41.0 33 35.182125674184846 38.0 34.0 40.0 26.0 41.0 34 35.1593029848002 38.0 34.0 40.0 26.0 41.0 35 34.98172039715617 38.0 34.0 40.0 25.0 41.0 36 34.91956898136798 38.0 34.0 40.0 24.0 41.0 37 34.60674721132631 38.0 34.0 40.0 23.0 41.0 38 34.541994821034564 37.0 33.0 40.0 23.0 41.0 39 34.39478502696739 37.0 33.0 40.0 23.0 41.0 40 34.35648290022064 37.0 33.0 40.0 23.0 41.0 41 34.319636399852904 37.0 33.0 40.0 23.0 41.0 42 34.35596960039225 37.0 33.0 40.0 23.0 41.0 43 34.28797269551361 37.0 33.0 40.0 23.0 41.0 44 34.16544726035793 37.0 33.0 40.0 22.0 41.0 45 34.02586801299338 37.0 33.0 40.0 22.0 41.0 46 33.92463302892866 37.0 33.0 40.0 21.0 41.0 47 33.82332909414072 37.0 33.0 40.0 21.0 41.0 48 33.72887426452562 37.0 33.0 40.0 21.0 41.0 49 33.677766456239276 36.0 33.0 40.0 20.0 41.0 50 33.463011767590096 36.0 32.0 40.0 20.0 41.0 51 31.568475729345426 35.0 29.0 38.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 15.0 10 9.0 11 12.0 12 5.0 13 4.0 14 6.0 15 11.0 16 25.0 17 86.0 18 150.0 19 359.0 20 578.0 21 845.0 22 1275.0 23 1897.0 24 2736.0 25 3849.0 26 4898.0 27 5433.0 28 5731.0 29 6179.0 30 7614.0 31 9219.0 32 12121.0 33 16423.0 34 23882.0 35 26305.0 36 25768.0 37 34553.0 38 42393.0 39 28662.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.713731919588135 16.89982226035793 20.99128156410885 15.395164255945085 2 32.09273106153469 32.52788673694533 21.47546886491787 13.903913336602109 3 25.261246629075757 31.721929394459426 29.965218190733022 13.051605785731796 4 23.17893478793822 20.561105663152734 40.74106705074773 15.518892498161312 5 30.973814047560676 23.67959365040451 28.080565089482718 17.266027212552096 6 21.173234861485657 36.680635572444224 29.351173694532974 12.794955871537143 7 56.91154388330473 16.090800441284628 22.824604682520224 4.173050992890414 8 64.0487098553567 13.260373253248344 16.612144520715862 6.078772370679088 9 60.26599656778622 5.788413214023045 17.383626501593525 16.561963716597205 10 41.08199007109586 19.57166278499632 24.48210345672959 14.86424368717823 11 31.82535547928414 20.551529173817112 30.413780951213532 17.209334395685218 12 25.650052096101987 18.248958077960285 35.17865898504535 20.922330840892375 13 20.02214084334396 23.53786160823731 41.237895317479776 15.202102230938955 14 18.017973155185093 29.03553260603089 31.70699007109586 21.239504167688157 15 13.89127237067909 22.648780338318215 46.642099779357686 16.817847511645013 16 16.494162172101003 22.40017467516548 35.162953542534936 25.942709610198577 17 17.357961510174064 21.636353885756314 36.839605295415545 24.16607930865408 18 17.395118288796276 22.89585376317725 37.3567357195391 22.352292228487375 19 19.162555160578574 24.606214758519247 32.8201611914685 23.411068889433682 20 20.70513606276048 23.673847756803138 38.302126746751654 17.318889433684724 21 18.842700416768814 30.342148810983083 33.29860259867615 17.516548173571955 22 16.80520654572199 21.820988600147096 34.147462613385635 27.226342240745282 23 16.622870188771756 28.910655185094384 33.65829553812209 20.80817908801177 24 21.67389372395195 20.568383795047808 32.65965923020348 25.098063250796766 25 15.708890046580043 31.113630791860754 32.22756803138024 20.949911130178968 26 16.306462981122824 23.295001838685952 34.23709855356705 26.161436626624173 27 21.01732961510174 27.430896052954157 29.45191836234371 22.099855969600394 28 16.03410762441775 22.867890414317234 39.10923326795783 21.988768693307183 29 20.185324221622945 18.986730816376564 34.803260603088994 26.0246843589115 30 20.7978364795293 24.701596592302035 35.787340647217455 18.713226280951215 31 26.734876808041186 20.40788183378279 30.085498896788426 22.771742461387596 32 26.402764157881837 24.386338563373375 31.231996200049032 17.97890107869576 33 21.306156533464087 20.72007538612405 33.38747241971071 24.58629566070115 34 21.665466413336603 20.692112037264035 35.01739090463349 22.62503064476587 35 24.823026477077715 20.744974258396663 30.94661681784751 23.48538244667811 36 25.329048173571955 20.139357072811965 33.161850330963475 21.369744422652612 37 23.467761706300564 21.681937974993872 38.00334027948026 16.8469600392253 38 22.56872088747242 23.778806079921548 31.795093772983574 21.857379259622455 39 20.188388698210346 21.60762441774945 39.64819808776661 18.555788796273596 40 23.876103211571465 20.33471745525864 35.55252512870802 20.23665420446188 41 19.065641088502083 23.32641272370679 34.56576366756558 23.042182520225545 42 23.626348369698455 20.327822382936994 34.53090524638392 21.51492400098063 43 23.44860872762932 20.928842853640596 31.535762441774946 24.086785976955134 44 21.422989703358667 21.535609217945577 33.98083169894582 23.06056937974994 45 19.94514586908556 21.25291125275803 31.652978671242955 27.148964206913462 46 26.207020715861727 24.276017406227016 29.912739029173817 19.604222848737436 47 17.847511645011032 19.99570973277764 41.10612282422162 21.050655797989705 48 21.678873498406475 22.3480785731797 31.43923142927188 24.53381649914195 49 19.544848614856583 17.50735474380976 40.287141456239276 22.660655185094384 50 21.286620495219417 20.19988048541309 34.40947536160824 24.104023657759257 51 20.166554302525128 20.67449129688649 29.68098798725178 29.477966413336603 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 183.0 1 251.0 2 319.0 3 3481.0 4 6643.0 5 4340.0 6 2037.0 7 1945.0 8 1853.0 9 1853.0 10 1853.0 11 1806.0 12 1759.0 13 1645.0 14 1531.0 15 1413.5 16 1296.0 17 1277.0 18 1258.0 19 1171.5 20 1085.0 21 1071.0 22 1057.0 23 1120.5 24 1184.0 25 1455.0 26 2187.0 27 2648.0 28 2555.5 29 2463.0 30 3054.5 31 3646.0 32 3989.0 33 4332.0 34 4895.0 35 5458.0 36 6021.5 37 6585.0 38 6945.5 39 7306.0 40 9017.5 41 10729.0 42 12459.0 43 14189.0 44 16991.0 45 19793.0 46 34834.5 47 49876.0 48 36989.0 49 24102.0 50 24201.0 51 24300.0 52 19838.0 53 15376.0 54 13391.0 55 11406.0 56 9748.0 57 8090.0 58 7633.0 59 7176.0 60 6718.5 61 6261.0 62 5455.5 63 4650.0 64 3795.0 65 2940.0 66 2553.5 67 2167.0 68 1873.5 69 1580.0 70 1278.0 71 976.0 72 749.0 73 522.0 74 386.5 75 223.5 76 196.0 77 168.5 78 141.0 79 91.5 80 42.0 81 31.5 82 21.0 83 20.0 84 19.0 85 12.0 86 5.0 87 5.0 88 5.0 89 3.0 90 1.0 91 3.0 92 5.0 93 7.5 94 10.0 95 7.5 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 261056.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.36159291493013 #Duplication Level Percentage of deduplicated Percentage of total 1 77.01080231430387 26.462138391762686 2 9.344169091334738 6.421610688894337 3 3.4803741234964267 3.58773596469723 4 1.906290759506371 2.6201274822260356 5 1.2162358003634215 2.0895899730326057 6 0.8004191610091079 1.6502206423142929 7 0.5819203371124712 1.399699681294435 8 0.44703075705383327 1.2288551115469477 9 0.328863025762795 1.0170231674430006 >10 4.7501198399161675 35.62530644765874 >50 0.09141277326287861 1.9336847266486885 >100 0.02564016811031961 1.8417504290267221 >500 0.008918319342719864 2.3224901936749203 >1k 0.004459159671359932 3.6057397646481983 >5k 0.0033443697535199494 8.19402733513116 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCG 7656 2.9327040941407208 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGC 7463 2.858773596469723 No Hit GAATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC 6272 2.402549644520716 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3985 1.5264924000980633 No Hit GCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 2650 1.0151078695758764 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCT 1652 0.6328144152978671 No Hit GAACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCT 1126 0.4313250796763913 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTA 988 0.3784628585437607 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTC 987 0.37807979897033583 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCG 843 0.32291922039715615 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGC 784 0.3003187055650895 No Hit GAATCTATCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC 751 0.28767773964206916 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTT 659 0.2524362588869821 No Hit CCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 539 0.20646911007599902 No Hit CTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGCT 512 0.19612650159352782 Illumina Single End Adapter 1 (95% over 21bp) GATATGGGGAGATCATGTGTTTAATAAATTGGCTATAATTTTAATATCTGT 430 0.16471561657268938 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGGTTTGTT 336 0.12870801667075263 No Hit ATGCAAGGGATGGTTTTATTTTCTACAATTTTTGTGTATTTGCTTTTTTGA 306 0.11721622946800686 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 293 0.1122364550134837 No Hit TCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 293 0.1122364550134837 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGT 288 0.11032115714635941 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTAT 286 0.10955503799950969 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2233237313066928 0.0 2 0.0 0.0 0.0 1.8348553567050747 0.0 3 0.0 0.0 0.0 2.1485811473400345 0.0 4 0.0 0.0 0.0 3.005868472664869 0.0 5 0.0 0.0 0.0 6.560278254474136 0.0 6 0.0 0.0 0.0 7.324865163030155 0.0 7 0.0 0.0 0.0 8.53609953419956 0.0 8 0.0 0.0 0.0 9.927754964452072 0.0 9 0.0 0.0 0.0 10.316943491051727 0.0 10 0.0 0.0 0.0 14.562009683746016 0.0 11 0.0 0.0 0.0 15.768647340034322 0.0 12 0.0 0.0 0.0 20.119437974993872 0.0 13 0.0 0.0 0.0 20.703220764893356 0.0 14 0.0 0.0 0.0 21.01005148320667 0.0 15 0.0 0.0 0.0 21.795706668301055 0.0 16 0.0 0.0 0.0 22.567571708752144 0.0 17 0.0 0.0 0.0 23.386553076734494 0.0 18 0.0 0.0 0.0 24.26835621475852 0.0 19 0.0 0.0 0.0 24.97701642559451 0.0 20 0.0 0.0 0.0 25.45813924981613 0.0 21 0.0 0.0 0.0 26.055329124785487 0.0 22 0.0 0.0 0.0 26.680865408188282 0.0 23 0.0 0.0 0.0 27.28380117675901 0.0 24 0.0 0.0 0.0 27.778714145623926 0.0 25 0.0 0.0 0.0 28.19203542534935 0.0 26 0.0 0.0 0.0 28.61071953910272 0.0 27 0.0 0.0 0.0 29.043193797499388 0.0 28 0.0 0.0 0.0 29.451535302770285 0.0 29 0.0 0.0 0.0 29.876348369698455 0.0 30 0.0 0.0 0.0 30.31648381956362 0.0 31 0.0 0.0 0.0 30.74551054179946 0.0 32 0.0 0.0 0.0 31.15538428536406 0.0 33 0.0 0.0 0.0 31.564491909781808 0.0 34 0.0 0.0 0.0 31.96670446187791 0.0 35 0.0 0.0 0.0 32.409904388330474 0.0 36 0.0 0.0 0.0 32.81671365530767 0.0 37 0.0 0.0 0.0 33.211648075508705 0.0 38 0.0 0.0 0.0 33.59202623191959 0.0 39 0.0 0.0 0.0 34.00496445207158 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGACC 20 7.0232595E-4 45.000004 10 CGTTATA 20 7.0232595E-4 45.000004 15 GTTACCG 45 3.8198777E-10 45.000004 10 TGACCAC 20 7.0232595E-4 45.000004 36 TCAGCGA 25 3.8824965E-5 45.000004 26 CGTAGCG 25 3.8824965E-5 45.000004 2 GCGATTT 20 7.0232595E-4 45.000004 9 CCCTTTG 20 7.0232595E-4 45.000004 18 TAGATTC 25 3.8824965E-5 45.000004 20 AACCTCC 20 7.0232595E-4 45.000004 26 CGAGAAT 40 6.7793735E-9 45.000004 6 GCGGATG 25 3.8824965E-5 45.000004 5 GACGCAT 20 7.0232595E-4 45.000004 10 ATACGGT 40 6.7793735E-9 45.000004 28 CTCTCGA 20 7.0232595E-4 45.000004 11 TTCGCGG 20 7.0232595E-4 45.000004 2 AGTACTT 20 7.0232595E-4 45.000004 42 AGTGTGC 20 7.0232595E-4 45.000004 28 CGAAGTA 45 3.8198777E-10 45.000004 15 GCGACCT 75 0.0 45.0 11 >>END_MODULE