##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936710.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 361263 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16108762868049 31.0 31.0 33.0 28.0 34.0 2 31.19196817830777 31.0 31.0 34.0 28.0 34.0 3 30.92816590683242 31.0 31.0 34.0 27.0 34.0 4 34.888200563024725 35.0 35.0 37.0 32.0 37.0 5 35.173530087498584 35.0 35.0 37.0 33.0 37.0 6 35.16427644126301 36.0 35.0 37.0 32.0 37.0 7 31.031007880685262 35.0 35.0 37.0 0.0 37.0 8 33.11723038340489 36.0 35.0 37.0 17.0 37.0 9 36.455800898514376 39.0 35.0 39.0 32.0 39.0 10 36.124718003227564 37.0 35.0 39.0 32.0 39.0 11 36.403163346370924 38.0 35.0 39.0 32.0 39.0 12 36.43933643910392 38.0 35.0 39.0 32.0 39.0 13 36.358096456044485 39.0 35.0 39.0 32.0 39.0 14 37.39792616459477 39.0 36.0 41.0 32.0 41.0 15 37.64696080141061 39.0 36.0 41.0 33.0 41.0 16 37.58502808203442 39.0 36.0 41.0 33.0 41.0 17 37.524418498434656 39.0 36.0 41.0 33.0 41.0 18 37.41451241893025 39.0 36.0 40.0 32.0 41.0 19 37.15879013350385 39.0 36.0 40.0 32.0 41.0 20 37.142757492463936 39.0 35.0 40.0 32.0 41.0 21 37.110639617121045 39.0 35.0 40.0 32.0 41.0 22 37.160951993423076 39.0 35.0 40.0 32.0 41.0 23 37.20198581089124 39.0 35.0 40.0 32.0 41.0 24 37.126652881695605 39.0 35.0 40.0 32.0 41.0 25 36.82582772107855 39.0 35.0 40.0 31.0 41.0 26 36.79540390242012 39.0 35.0 40.0 31.0 41.0 27 36.80434752521017 39.0 35.0 40.0 31.0 41.0 28 36.846485801203 39.0 35.0 40.0 31.0 41.0 29 36.82727265178001 39.0 35.0 40.0 31.0 41.0 30 36.57808577130788 38.0 35.0 40.0 31.0 41.0 31 36.50963425537628 38.0 35.0 40.0 31.0 41.0 32 36.310729302474925 38.0 35.0 40.0 30.0 41.0 33 36.11811616467781 38.0 35.0 40.0 30.0 41.0 34 36.00753744501928 38.0 35.0 40.0 29.0 41.0 35 35.885595812469035 38.0 35.0 40.0 29.0 41.0 36 35.810794352037156 38.0 35.0 40.0 29.0 41.0 37 35.71996578669833 38.0 35.0 40.0 28.0 41.0 38 35.58869853818409 38.0 35.0 40.0 27.0 41.0 39 35.52701494479091 38.0 35.0 40.0 27.0 41.0 40 35.42082361049983 38.0 35.0 40.0 26.0 41.0 41 35.30645540783308 38.0 34.0 40.0 26.0 41.0 42 35.30562498788971 38.0 34.0 40.0 26.0 41.0 43 35.23080691905897 38.0 34.0 40.0 26.0 41.0 44 34.991017624279266 38.0 34.0 40.0 24.0 41.0 45 34.923346703094424 38.0 34.0 40.0 24.0 41.0 46 34.8131416724104 38.0 34.0 40.0 24.0 41.0 47 34.79859548306912 38.0 34.0 40.0 24.0 41.0 48 34.71542892574108 38.0 34.0 40.0 23.0 41.0 49 34.619429612221566 37.0 34.0 40.0 24.0 41.0 50 34.46635276792807 37.0 34.0 40.0 23.0 41.0 51 32.85428067640473 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 19.0 9 36.0 10 35.0 11 28.0 12 20.0 13 12.0 14 16.0 15 41.0 16 72.0 17 113.0 18 202.0 19 352.0 20 558.0 21 918.0 22 1321.0 23 2113.0 24 3042.0 25 4317.0 26 5561.0 27 5869.0 28 6231.0 29 6920.0 30 8232.0 31 10022.0 32 13067.0 33 18408.0 34 28712.0 35 31878.0 36 34631.0 37 52082.0 38 70542.0 39 55893.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.53850795680709 20.963121050315145 24.80741177480118 14.690959218076582 2 35.464744521304425 23.785718437814 25.25362409103617 15.495912949845403 3 33.04047189997315 22.360717814999045 29.086288936315096 15.51252134871271 4 28.42306020821396 25.767100422683754 27.69838040430379 18.111458964798498 5 25.37846388918876 29.03895499954327 27.401920484522357 18.180660626745613 6 25.590497781394717 33.87476713640755 26.88484566645353 13.649889415744209 7 68.21069414803065 18.226610530278496 10.355890307061614 3.2068050146292313 8 79.62952198259994 5.801867337645981 10.941613173781981 3.6269975059721036 9 73.73907651766164 7.778543609503326 13.092400827098263 5.389979045736762 10 40.044233702316596 25.430503538972992 21.215291906450425 13.309970852259989 11 31.966185299906165 26.001832460008362 25.707863800057023 16.324118440028457 12 29.097638008874423 23.39652829102344 29.935254925082283 17.57057877501986 13 23.822533721969865 26.04363026382441 30.711697572128895 19.422138442076825 14 19.726348947996335 29.493748321859698 31.05770588186446 19.72219684827951 15 19.34269493416154 26.775507040577086 36.373223939346126 17.508574085915246 16 21.81706955874252 24.063078698898032 35.2039926590877 18.915859083271744 17 22.26494271486424 23.985572837517267 31.239567849461476 22.50991659815702 18 23.955400912908324 24.82457378696407 30.949197675931384 20.270827624196222 19 24.229439494218894 26.31351674541816 29.851659317450167 19.605384442912783 20 26.621879351054496 25.775681428765196 29.557967464146618 18.04447175603369 21 24.692813822616763 25.763778742910286 30.277387941748806 19.266019492724137 22 23.723990555357176 23.858241779534577 30.854806609035524 21.562961056072723 23 21.995609846566076 26.59918120593584 30.213999219405252 21.19120972809283 24 22.612888671134325 24.621120900839554 32.812660028843254 19.953330399182867 25 20.860702590633416 25.423029759482702 30.638343810464953 23.077923839418926 26 20.433589933095835 28.103348530018295 30.380083208078325 21.082978328807545 27 20.648115085131884 28.280781591250697 31.28164245992532 19.789460863692103 28 19.316951915917212 27.151687274921592 33.04323996645103 20.48812084271016 29 21.07301328948716 25.9337380246524 32.177388772168754 20.815859913691686 30 20.80478764778015 25.999064393530475 31.853248187608475 21.3428997710809 31 22.375111760684042 27.278464719608706 29.156044211557784 21.190379308149467 32 23.512787083094587 26.8328060166693 29.504820587771235 20.14958631246488 33 22.209304578658763 27.039026969271696 29.671458189739887 21.08021026232966 34 21.131419492170526 26.041692617289897 31.162338794728495 21.664549095811083 35 21.345391030911 25.919067272319612 30.793909146522065 21.941632550247327 36 21.915335918707424 27.726891489026002 29.70024608110988 20.657526511156693 37 21.425664958769648 27.218397677038613 30.833492497155813 20.522444867035926 38 21.583167941361282 27.969097305840897 28.351644093084538 22.096090659713283 39 22.881391119489123 26.097053946847588 30.019957759305548 21.001597174357737 40 22.516006344408368 26.087919327470573 30.917364911435712 20.47870941668535 41 19.751815159592873 25.757412190011152 31.320118583967915 23.17065406642806 42 22.46202904808962 26.002939686599515 29.299706861759994 22.235324403550877 43 22.9395205155247 25.974982215172883 28.677445517531545 22.40805175177087 44 21.248231897537252 27.213415157378417 28.7912130497726 22.747139895311726 45 21.6977658935457 26.615789604803147 28.783462463634528 22.902982038016624 46 21.955749689284538 26.72734268386189 29.26925813050326 22.047649496350306 47 21.223872912531867 26.054702529735955 30.70145572616072 22.01996883157146 48 21.586489621134742 25.59963240077174 30.670453381608414 22.143424596485108 49 21.870216435117907 24.458358591939945 30.974387080880135 22.697037892062017 50 19.97575173765373 25.907995006408076 30.64332633012514 23.472926925813052 51 20.135745980075455 26.11061747258922 29.09542355569211 24.658212991643207 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 126.0 1 390.5 2 655.0 3 2982.5 4 5310.0 5 3674.5 6 2039.0 7 1980.5 8 1922.0 9 1875.0 10 1828.0 11 1743.0 12 1658.0 13 1709.5 14 1761.0 15 1757.5 16 1754.0 17 1715.0 18 1676.0 19 1614.5 20 1553.0 21 1666.0 22 1779.0 23 2051.5 24 2324.0 25 2262.0 26 2749.0 27 3298.0 28 4058.5 29 4819.0 30 6134.5 31 7450.0 32 8176.5 33 8903.0 34 10317.5 35 11732.0 36 11875.0 37 12018.0 38 13126.0 39 14234.0 40 16188.5 41 18143.0 42 20291.5 43 22440.0 44 24767.0 45 27094.0 46 28991.0 47 30888.0 48 30916.5 49 30945.0 50 29788.5 51 28632.0 52 25996.5 53 23361.0 54 21401.5 55 19442.0 56 17645.5 57 15849.0 58 14981.0 59 14113.0 60 13283.0 61 12453.0 62 10984.5 63 9516.0 64 7780.0 65 6044.0 66 5281.5 67 4519.0 68 3768.0 69 3017.0 70 2654.0 71 2291.0 72 1819.0 73 1347.0 74 1185.5 75 758.0 76 492.0 77 412.5 78 333.0 79 231.5 80 130.0 81 98.5 82 67.0 83 45.0 84 23.0 85 22.0 86 21.0 87 15.0 88 9.0 89 10.0 90 11.0 91 10.5 92 10.0 93 7.5 94 5.0 95 4.5 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 361263.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.174920430415895 #Duplication Level Percentage of deduplicated Percentage of total 1 75.20377378852662 24.94879211501367 2 8.516643961905809 5.6507797154081425 3 3.4230720270367088 3.4068042637357583 4 2.026024029338267 2.688527438536304 5 1.4086264443821837 2.3365535104279305 6 1.0055714672628284 2.0015852048124536 7 0.8117462753683287 1.8850732666521541 8 0.6012839529831722 1.5958037837042134 9 0.4902117762698976 1.4636463004626021 >10 6.296752013402972 47.98749631856075 >50 0.19458132587224913 3.8232633494498853 >100 0.02004271167782824 1.243391732777615 >500 8.351129865761765E-4 0.15154529363399183 >1k 8.351129865761765E-4 0.8167377068245117 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2948 0.8160259976803603 No Hit GCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC 547 0.15141323634028395 TruSeq Adapter, Index 20 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC 369 0.10214165303393927 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10186484638615081 0.0 2 0.0 0.0 0.0 0.5134763316475809 0.0 3 0.0 0.0 0.0 0.660737468271038 0.0 4 0.0 0.0 0.0 0.8879957261053582 0.0 5 0.0 0.0 0.0 1.5069353905603398 0.0 6 0.0 0.0 0.0 1.869275292515425 0.0 7 0.0 0.0 0.0 2.2263558681625297 0.0 8 0.0 0.0 0.0 2.7965775626067435 0.0 9 0.0 0.0 0.0 3.000584062026834 0.0 10 0.0 0.0 0.0 3.58464608886047 0.0 11 0.0 0.0 0.0 4.365240835623909 0.0 12 0.0 0.0 0.0 5.0364969565109075 0.0 13 0.0 0.0 0.0 5.298079238670996 0.0 14 0.0 0.0 0.0 5.4082482844908 0.0 15 0.0 0.0 0.0 5.638274608803005 0.0 16 0.0 0.0 0.0 6.116319689533664 0.0 17 0.0 0.0 0.0 6.682389284261051 0.0 18 0.0 0.0 0.0 7.350600532022377 0.0 19 0.0 0.0 0.0 7.726780766366885 0.0 20 0.0 0.0 0.0 8.09105831485649 0.0 21 0.0 0.0 0.0 8.52038542557638 0.0 22 0.0 0.0 0.0 8.995385633181366 0.0 23 0.0 0.0 0.0 9.468171387604045 0.0 24 0.0 0.0 0.0 9.865112120532686 0.0 25 0.0 0.0 0.0 10.210843623620464 0.0 26 0.0 0.0 0.0 10.509794803231994 0.0 27 0.0 0.0 0.0 10.84334681381708 0.0 28 0.0 0.0 0.0 11.14949496627111 0.0 29 0.0 0.0 0.0 11.470590677705715 0.0 30 0.0 0.0 0.0 11.894381655469838 0.0 31 0.0 0.0 0.0 12.269177856575403 0.0 32 0.0 0.0 0.0 12.631517758530489 0.0 33 0.0 0.0 0.0 13.017663032195381 0.0 34 0.0 0.0 0.0 13.34346445664239 0.0 35 0.0 0.0 0.0 13.709679651666514 0.0 36 0.0 0.0 0.0 14.04683014867285 0.0 37 2.768066477884533E-4 0.0 0.0 14.396160138181878 0.0 38 2.768066477884533E-4 0.0 0.0 14.741614834621869 0.0 39 2.768066477884533E-4 0.0 0.0 15.095373730495512 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTGA 25 3.8854778E-5 45.0 6 TCGTTGA 20 7.0268573E-4 45.0 24 CCGATAA 20 7.0268573E-4 45.0 11 GCGCGCC 25 3.8854778E-5 45.0 16 CGGTTTA 20 7.0268573E-4 45.0 1 GACCGTT 25 3.8854778E-5 45.0 39 TCGATAG 20 7.0268573E-4 45.0 2 TAGCCGT 25 3.8854778E-5 45.0 44 CTGCGCG 20 7.0268573E-4 45.0 1 ATCCGGC 20 7.0268573E-4 45.0 18 TACGCGG 20 7.0268573E-4 45.0 2 TGCGCGC 25 3.8854778E-5 45.0 15 TACGATG 25 3.8854778E-5 45.0 1 TACGACC 20 7.0268573E-4 45.0 32 TCGTACA 20 7.0268573E-4 45.0 34 TAGATCG 20 7.0268573E-4 45.0 1 TATAGCG 20 7.0268573E-4 45.0 1 CGTAAAG 20 7.0268573E-4 45.0 28 ACGTACT 20 7.0268573E-4 45.0 30 CGCACGG 25 3.8854778E-5 45.0 2 >>END_MODULE