SRR2936708.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936708.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	357990
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5503	1.5371937763624683	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	2131	0.5952680242464873	No Hit
CCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	498	0.1391100310064527	No Hit
GCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	473	0.1321265957149641	No Hit
GGCAAGGTGGGGTGAGGCCCGGAGTTGGGGAAGCTAGGAGGCTTAAAGCCT	464	0.12961255901002822	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	414	0.11564568842705103	No Hit
TCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	375	0.10475152937232883	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGGGC	35	1.2087912E-7	45.000004	4
CGTCGAC	35	1.2087912E-7	45.000004	32
TCGAGCG	30	2.1612977E-6	45.000004	1
GGCGATC	30	2.1612977E-6	45.000004	8
GTAAACG	35	1.2087912E-7	45.000004	1
AACCGCG	25	3.8854065E-5	45.0	16
GGTAAGC	20	7.026771E-4	45.0	9
CGTGATG	20	7.026771E-4	45.0	17
TTTCGAG	40	6.7921064E-9	45.0	1
CGCGCAA	25	3.8854065E-5	45.0	19
CGATTTA	20	7.026771E-4	45.0	12
GGATATC	25	3.8854065E-5	45.0	8
ACGGGTC	20	7.026771E-4	45.0	5
CCCGTGC	20	7.026771E-4	45.0	15
GGACGGC	25	3.8854065E-5	45.0	8
GCGATAC	40	6.7921064E-9	45.0	9
ATGCGCG	25	3.8854065E-5	45.0	1
GCGTGAT	20	7.026771E-4	45.0	16
TCGAAAA	25	3.8854065E-5	45.0	28
TACGTGT	20	7.026771E-4	45.0	12