SRR2936706.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936706.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	277000
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG	4915	1.7743682310469313	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC	3858	1.3927797833935018	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC	3037	1.096389891696751	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2181	0.7873646209386282	No Hit
GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	1283	0.46317689530685924	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT	887	0.32021660649819494	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTA	588	0.21227436823104692	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG	535	0.1931407942238267	No Hit
GAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT	509	0.18375451263537906	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTC	500	0.18050541516245489	No Hit
CCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	402	0.1451263537906137	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC	393	0.14187725631768952	No Hit
GAATCTATCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC	383	0.13826714801444043	No Hit
CTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT	314	0.11335740072202166	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACTC	20	7.0240063E-4	45.000004	32
GTTGACG	20	7.0240063E-4	45.000004	1
TTAGGAC	20	7.0240063E-4	45.000004	5
CGGAAAG	20	7.0240063E-4	45.000004	7
GCAAGCG	20	7.0240063E-4	45.000004	30
CAACGCG	20	7.0240063E-4	45.000004	1
TCCGAAC	20	7.0240063E-4	45.000004	17
TAGGTCG	20	7.0240063E-4	45.000004	36
CGGCACA	20	7.0240063E-4	45.000004	41
GCTATCT	20	7.0240063E-4	45.000004	4
CGCGACC	20	7.0240063E-4	45.000004	10
TTATAGC	20	7.0240063E-4	45.000004	43
GCACAAT	20	7.0240063E-4	45.000004	21
ACGGCAC	20	7.0240063E-4	45.000004	40
CGGATTG	20	7.0240063E-4	45.000004	24
CGGGACC	40	6.7830115E-9	45.000004	6
TATAGCC	20	7.0240063E-4	45.000004	44
GACGAGT	20	7.0240063E-4	45.000004	21
TGCGTGC	20	7.0240063E-4	45.000004	26
ATCTGCG	20	7.0240063E-4	45.000004	15