##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936706.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 277000 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1263321299639 31.0 31.0 33.0 28.0 34.0 2 31.165447653429602 31.0 31.0 34.0 28.0 34.0 3 30.900462093862817 31.0 31.0 34.0 27.0 34.0 4 34.88461010830325 35.0 35.0 37.0 32.0 37.0 5 35.13174729241877 35.0 35.0 37.0 33.0 37.0 6 35.12767148014441 36.0 35.0 37.0 32.0 37.0 7 30.934931407942237 35.0 35.0 37.0 0.0 37.0 8 32.959942238267146 35.0 35.0 37.0 17.0 37.0 9 36.180072202166066 39.0 35.0 39.0 32.0 39.0 10 36.082581227436826 37.0 35.0 39.0 32.0 39.0 11 36.348158844765344 37.0 35.0 39.0 32.0 39.0 12 36.32797472924188 38.0 35.0 39.0 32.0 39.0 13 36.07265703971119 38.0 35.0 39.0 31.0 39.0 14 37.15442960288809 39.0 36.0 40.0 32.0 41.0 15 37.28719855595668 39.0 36.0 41.0 32.0 41.0 16 37.395628158844765 39.0 36.0 40.0 32.0 41.0 17 37.18897833935018 39.0 35.0 40.0 32.0 41.0 18 37.12761010830325 39.0 36.0 40.0 32.0 41.0 19 36.88729963898917 38.0 35.0 40.0 31.0 41.0 20 36.7750036101083 38.0 35.0 40.0 31.0 41.0 21 36.92009025270758 39.0 35.0 40.0 32.0 41.0 22 36.93731046931408 39.0 35.0 40.0 32.0 41.0 23 37.01565703971119 39.0 35.0 40.0 32.0 41.0 24 36.92203249097473 39.0 35.0 40.0 32.0 41.0 25 36.69829241877256 38.0 35.0 40.0 31.0 41.0 26 36.57779061371841 38.0 35.0 40.0 31.0 41.0 27 36.660411552346574 38.0 35.0 40.0 31.0 41.0 28 36.611173285198554 38.0 35.0 40.0 31.0 41.0 29 36.5775559566787 38.0 35.0 40.0 31.0 41.0 30 36.3672202166065 38.0 35.0 40.0 30.0 41.0 31 36.28928519855596 38.0 35.0 40.0 30.0 41.0 32 36.09530685920578 38.0 35.0 40.0 30.0 41.0 33 35.84689891696751 38.0 35.0 40.0 29.0 41.0 34 35.65868231046932 38.0 35.0 40.0 28.0 41.0 35 35.636440433213 38.0 35.0 40.0 28.0 41.0 36 35.46790974729242 38.0 35.0 40.0 27.0 41.0 37 35.45725631768953 38.0 35.0 40.0 27.0 41.0 38 35.3142202166065 38.0 35.0 40.0 26.0 41.0 39 35.30087364620939 38.0 35.0 40.0 26.0 41.0 40 35.24410469314079 38.0 35.0 40.0 26.0 41.0 41 35.019602888086645 38.0 34.0 40.0 25.0 41.0 42 35.04095667870036 38.0 34.0 40.0 25.0 41.0 43 34.994465703971116 38.0 34.0 40.0 24.0 41.0 44 34.835451263537905 38.0 34.0 40.0 24.0 41.0 45 34.77336101083033 38.0 34.0 40.0 24.0 41.0 46 34.64528158844765 38.0 34.0 40.0 23.0 41.0 47 34.570750902527074 37.0 34.0 40.0 23.0 41.0 48 34.472859205776174 37.0 34.0 40.0 23.0 41.0 49 34.423830324909744 37.0 34.0 40.0 23.0 41.0 50 34.250249097472924 37.0 33.0 40.0 23.0 41.0 51 32.59181949458484 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 17.0 10 26.0 11 12.0 12 16.0 13 10.0 14 5.0 15 27.0 16 46.0 17 91.0 18 178.0 19 340.0 20 586.0 21 844.0 22 1221.0 23 1758.0 24 2348.0 25 3383.0 26 4335.0 27 4847.0 28 5074.0 29 5546.0 30 6587.0 31 8385.0 32 10996.0 33 15161.0 34 23700.0 35 26383.0 36 26669.0 37 38703.0 38 50243.0 39 39451.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.39350180505415 18.851985559566785 21.342238267148016 15.412274368231046 2 32.33285198555957 28.603249097472922 21.998916967509025 17.06498194945848 3 28.737906137184115 27.47256317689531 28.86462093862816 14.92490974729242 4 27.138628158844764 23.230324909747292 32.893140794223825 16.737906137184115 5 27.27942238267148 27.269314079422386 26.71516245487365 18.73610108303249 6 23.47436823104693 36.911552346570396 26.451985559566786 13.162093862815885 7 62.819133574007225 17.908664259927797 15.587003610108303 3.6851985559566787 8 72.88375451263538 9.968231046931407 12.727797833935018 4.420216606498196 9 67.91191335740072 7.085559566787003 14.070758122743682 10.931768953068593 10 41.80469314079423 20.641516245487367 22.36028880866426 15.193501805054153 11 33.451985559566786 22.447292418772562 26.65956678700361 17.441155234657042 12 29.225270758122747 19.909386281588446 30.812274368231048 20.053068592057762 13 24.10072202166065 25.02707581227437 33.61516245487365 17.257039711191336 14 19.57039711191336 29.447292418772562 30.623826714801446 20.358483754512633 15 17.57725631768953 24.270036101083033 40.09061371841155 18.062093862815885 16 19.982671480144404 23.328158844765344 33.73212996389891 22.957039711191335 17 20.418772563176894 22.42851985559567 33.13898916967509 24.013718411552347 18 21.309025270758124 24.334296028880868 33.61660649819495 20.740072202166065 19 21.78158844765343 27.157039711191334 29.837545126353792 21.223826714801444 20 24.445126353790613 25.06823104693141 32.37184115523466 18.114801444043323 21 22.52851985559567 28.84801444043321 30.083393501805055 18.540072202166066 22 20.72129963898917 22.83068592057762 30.76101083032491 25.687003610108306 23 19.61227436823105 27.370036101083034 31.26028880866426 21.75740072202166 24 22.750902527075812 23.03682310469314 31.072924187725633 23.139350180505417 25 18.863537906137186 28.724548736462097 30.776534296028878 21.63537906137184 26 17.84873646209386 27.870758122743684 31.257039711191336 23.02346570397112 27 21.24620938628159 28.192418772563176 28.92129963898917 21.640072202166067 28 17.900361010830327 25.136462093862814 35.74368231046932 21.219494584837545 29 21.4129963898917 24.8101083032491 32.44187725631769 21.335018050541514 30 21.897472924187724 26.62418772563177 31.269314079422383 20.209025270758122 31 24.39025270758123 24.145848375451266 28.50505415162455 22.95884476534296 32 24.41480144404332 26.042238267148015 29.204693140794223 20.33826714801444 33 22.881227436823103 23.686281588447653 27.87328519855596 25.559205776173282 34 22.611913357400724 27.169314079422385 29.49350180505415 20.725270758122743 35 22.054512635379062 24.71768953068592 28.388447653429605 24.839350180505416 36 23.488447653429603 26.131407942238265 30.345126353790615 20.035018050541517 37 23.067148014440434 25.130324909747294 32.70649819494585 19.096028880866424 38 20.97436823104693 25.917689530685923 28.018411552346574 25.08953068592058 39 23.198555956678703 25.206859205776173 30.616606498194948 20.97797833935018 40 22.493862815884476 24.34584837545126 28.037906137184116 25.122382671480143 41 22.037906137184116 24.481227436823104 29.114079422382673 24.366787003610106 42 20.561371841155236 24.746931407942238 30.90072202166065 23.790974729241874 43 23.015884476534296 24.089530685920575 29.252707581227437 23.641877256317688 44 21.66859205776173 25.00361010830325 30.079783393501806 23.248014440433213 45 20.53754512635379 24.735018050541516 29.101805054151626 25.625631768953067 46 24.737906137184115 26.458483754512635 27.336462093862817 21.467148014440433 47 19.63249097472924 24.457761732851985 33.20469314079422 22.705054151624548 48 22.575451263537907 24.225270758122743 29.419133574007223 23.78014440433213 49 19.858483754512633 22.294584837545127 33.90108303249097 23.945848375451266 50 20.36101083032491 23.470758122743682 31.640072202166063 24.528158844765343 51 20.57797833935018 24.414440433213 28.273646209386282 26.73393501805054 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 122.0 1 314.0 2 506.0 3 2420.0 4 4334.0 5 3046.0 6 1758.0 7 1689.0 8 1620.0 9 1546.5 10 1473.0 11 1485.5 12 1498.0 13 1396.0 14 1294.0 15 1232.5 16 1171.0 17 1126.0 18 1081.0 19 1100.0 20 1119.0 21 1067.5 22 1016.0 23 1038.5 24 1061.0 25 1222.0 26 1746.5 27 2110.0 28 2673.0 29 3236.0 30 3361.0 31 3486.0 32 4188.5 33 4891.0 34 5659.5 35 6428.0 36 7200.5 37 7973.0 38 8547.5 39 9122.0 40 10935.0 41 12748.0 42 14769.0 43 16790.0 44 18430.5 45 20071.0 46 28998.0 47 37925.0 48 31267.0 49 24609.0 50 23899.5 51 23190.0 52 20392.5 53 17595.0 54 15524.0 55 13453.0 56 12848.0 57 12243.0 58 11755.5 59 11268.0 60 10171.0 61 9074.0 62 7962.0 63 6850.0 64 6119.0 65 5388.0 66 4401.0 67 3414.0 68 2837.0 69 2260.0 70 1870.0 71 1480.0 72 1175.5 73 871.0 74 652.5 75 367.0 76 300.0 77 236.0 78 172.0 79 125.5 80 79.0 81 66.5 82 54.0 83 37.5 84 21.0 85 17.0 86 13.0 87 10.0 88 7.0 89 6.0 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 277000.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.95018050541516 #Duplication Level Percentage of deduplicated Percentage of total 1 76.12630379524936 25.08375451263538 2 8.502059777368745 5.602888086642599 3 3.3175563151897625 3.2794223826714797 4 2.0093785607853447 2.6483754512635382 5 1.3684371987027786 2.2545126353790614 6 0.9268998159347883 1.832490974729242 7 0.7143483215005697 1.647653429602888 8 0.5456218774651591 1.4382671480144404 9 0.4503023928477518 1.3353790613718413 >10 5.830922955561399 43.36425992779783 >50 0.16872644403541065 3.3328519855595666 >100 0.029581909019195374 1.756678700361011 >500 0.004382505039880796 0.9093862815884476 >1k 0.0054781312998509945 5.514079422382672 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG 4915 1.7743682310469313 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC 3858 1.3927797833935018 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC 3037 1.096389891696751 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2181 0.7873646209386282 No Hit GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC 1283 0.46317689530685924 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT 887 0.32021660649819494 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTA 588 0.21227436823104692 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG 535 0.1931407942238267 No Hit GAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT 509 0.18375451263537906 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTC 500 0.18050541516245489 No Hit CCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC 402 0.1451263537906137 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC 393 0.14187725631768952 No Hit GAATCTATCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC 383 0.13826714801444043 No Hit CTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT 314 0.11335740072202166 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12707581227436823 0.0 2 0.0 0.0 0.0 0.9375451263537906 0.0 3 0.0 0.0 0.0 1.119494584837545 0.0 4 0.0 0.0 0.0 1.5379061371841156 0.0 5 0.0 0.0 0.0 3.2902527075812276 0.0 6 0.0 0.0 0.0 3.7498194945848375 0.0 7 0.0 0.0 0.0 4.429963898916967 0.0 8 0.0 0.0 0.0 5.263537906137184 0.0 9 0.0 0.0 0.0 5.49927797833935 0.0 10 0.0 0.0 0.0 8.148375451263538 0.0 11 0.0 0.0 0.0 9.049097472924188 0.0 12 0.0 0.0 0.0 11.37870036101083 0.0 13 0.0 0.0 0.0 11.767870036101083 0.0 14 0.0 0.0 0.0 11.954873646209386 0.0 15 0.0 0.0 0.0 12.409025270758123 0.0 16 0.0 0.0 0.0 12.97725631768953 0.0 17 0.0 0.0 0.0 13.588447653429602 0.0 18 0.0 0.0 0.0 14.295667870036102 0.0 19 0.0 0.0 0.0 14.766787003610109 0.0 20 0.0 0.0 0.0 15.150902527075813 0.0 21 0.0 0.0 0.0 15.575451263537905 0.0 22 0.0 0.0 0.0 16.033574007220217 0.0 23 0.0 0.0 0.0 16.456317689530685 0.0 24 0.0 0.0 0.0 16.837545126353792 0.0 25 0.0 0.0 0.0 17.144404332129962 0.0 26 0.0 0.0 0.0 17.44187725631769 0.0 27 0.0 0.0 0.0 17.73826714801444 0.0 28 0.0 0.0 0.0 18.071841155234658 0.0 29 0.0 0.0 0.0 18.40072202166065 0.0 30 0.0 0.0 0.0 18.785559566787004 0.0 31 0.0 0.0 0.0 19.135740072202164 0.0 32 0.0 0.0 0.0 19.47797833935018 0.0 33 0.0 0.0 0.0 19.82274368231047 0.0 34 0.0 0.0 0.0 20.164259927797833 0.0 35 0.0 0.0 0.0 20.49350180505415 0.0 36 0.0 0.0 0.0 20.814079422382672 0.0 37 0.0 0.0 0.0 21.13321299638989 0.0 38 0.0 0.0 0.0 21.49927797833935 0.0 39 0.0 0.0 0.0 21.84115523465704 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACTC 20 7.0240063E-4 45.000004 32 GTTGACG 20 7.0240063E-4 45.000004 1 TTAGGAC 20 7.0240063E-4 45.000004 5 CGGAAAG 20 7.0240063E-4 45.000004 7 GCAAGCG 20 7.0240063E-4 45.000004 30 CAACGCG 20 7.0240063E-4 45.000004 1 TCCGAAC 20 7.0240063E-4 45.000004 17 TAGGTCG 20 7.0240063E-4 45.000004 36 CGGCACA 20 7.0240063E-4 45.000004 41 GCTATCT 20 7.0240063E-4 45.000004 4 CGCGACC 20 7.0240063E-4 45.000004 10 TTATAGC 20 7.0240063E-4 45.000004 43 GCACAAT 20 7.0240063E-4 45.000004 21 ACGGCAC 20 7.0240063E-4 45.000004 40 CGGATTG 20 7.0240063E-4 45.000004 24 CGGGACC 40 6.7830115E-9 45.000004 6 TATAGCC 20 7.0240063E-4 45.000004 44 GACGAGT 20 7.0240063E-4 45.000004 21 TGCGTGC 20 7.0240063E-4 45.000004 26 ATCTGCG 20 7.0240063E-4 45.000004 15 >>END_MODULE