##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936703.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 632774 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.183255000995615 31.0 31.0 33.0 28.0 34.0 2 31.235581740084136 31.0 31.0 34.0 28.0 34.0 3 31.02922844491082 31.0 31.0 34.0 28.0 34.0 4 34.99341945149453 35.0 35.0 37.0 32.0 37.0 5 35.2067294168218 35.0 35.0 37.0 33.0 37.0 6 35.16125504524522 36.0 35.0 37.0 32.0 37.0 7 30.84599872940418 35.0 35.0 37.0 0.0 37.0 8 32.98792143798576 36.0 35.0 37.0 17.0 37.0 9 36.42468875143416 39.0 35.0 39.0 32.0 39.0 10 36.13950162301232 37.0 35.0 39.0 32.0 39.0 11 36.321400689661715 38.0 35.0 39.0 32.0 39.0 12 36.3408926409745 38.0 35.0 39.0 32.0 39.0 13 36.28884878329388 38.0 35.0 39.0 32.0 39.0 14 37.16135934788724 39.0 36.0 40.0 31.0 41.0 15 37.4165610470721 39.0 36.0 41.0 32.0 41.0 16 37.37467721492982 39.0 36.0 41.0 32.0 41.0 17 37.32027864608849 39.0 36.0 40.0 32.0 41.0 18 37.23549798190191 39.0 36.0 40.0 32.0 41.0 19 37.05945250594999 39.0 35.0 40.0 32.0 41.0 20 37.048331631830635 39.0 35.0 40.0 31.0 41.0 21 37.02413657956869 39.0 35.0 40.0 31.0 41.0 22 37.153070448532965 39.0 35.0 40.0 32.0 41.0 23 37.200736755934976 39.0 35.0 40.0 32.0 41.0 24 37.12961499682351 39.0 35.0 40.0 32.0 41.0 25 36.77168783799587 39.0 35.0 40.0 31.0 41.0 26 36.75736202814907 39.0 35.0 40.0 31.0 41.0 27 36.78028490424701 39.0 35.0 40.0 31.0 41.0 28 36.75527913599484 39.0 35.0 40.0 31.0 41.0 29 36.70622370704233 39.0 35.0 40.0 31.0 41.0 30 36.45930774652562 38.0 35.0 40.0 30.0 41.0 31 36.43480136668068 38.0 35.0 40.0 30.0 41.0 32 36.31018657530176 38.0 35.0 40.0 30.0 41.0 33 36.19185680827594 38.0 35.0 40.0 30.0 41.0 34 36.056772244118754 38.0 35.0 40.0 30.0 41.0 35 35.988386058845656 38.0 35.0 40.0 29.0 41.0 36 35.93495624030064 38.0 35.0 40.0 29.0 41.0 37 35.866645911494466 38.0 35.0 40.0 29.0 41.0 38 35.70695698622257 38.0 35.0 40.0 28.0 41.0 39 35.61673520087741 38.0 34.0 40.0 28.0 41.0 40 35.50171309187799 38.0 34.0 40.0 27.0 41.0 41 35.30410225451741 38.0 34.0 40.0 27.0 41.0 42 35.305791641249485 38.0 34.0 40.0 27.0 41.0 43 35.25666035583004 38.0 34.0 40.0 27.0 41.0 44 35.0453969347666 38.0 34.0 40.0 26.0 41.0 45 34.97779143896557 37.0 34.0 40.0 26.0 41.0 46 34.90469267068495 37.0 34.0 40.0 26.0 41.0 47 34.82600264865497 37.0 34.0 40.0 26.0 41.0 48 34.73031445666225 37.0 34.0 40.0 26.0 41.0 49 34.59295735918353 37.0 33.0 40.0 25.0 41.0 50 34.41349202084788 36.0 33.0 40.0 24.0 41.0 51 32.77057053545184 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 34.0 9 56.0 10 83.0 11 54.0 12 35.0 13 31.0 14 46.0 15 83.0 16 156.0 17 242.0 18 396.0 19 688.0 20 1128.0 21 1690.0 22 2530.0 23 3497.0 24 4781.0 25 6478.0 26 7962.0 27 9121.0 28 10624.0 29 12348.0 30 15236.0 31 19291.0 32 25378.0 33 34679.0 34 51744.0 35 54094.0 36 65338.0 37 93688.0 38 118253.0 39 93003.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.408581894957756 20.890396887356307 25.02378416306612 13.677237054619818 2 32.83257529544514 23.00884676045476 27.191540739663765 16.967037204436338 3 33.28534358238486 22.434866160746175 27.65252681052003 16.627263446348934 4 28.74122514515451 25.91256910050034 25.90640576256294 19.439799991782216 5 26.201455812027675 29.380473913277093 25.4648579113554 18.953212363339834 6 27.33614212973352 34.50031132758299 23.963690037833413 14.199856504850072 7 71.43103224848049 17.94337314744285 7.120551729369412 3.5050428747072413 8 84.75427245746506 4.290789444572628 7.362660286294949 3.592277811667357 9 79.08747830979149 6.3646736433545 9.454718430276845 5.0931296165771665 10 45.96570023420684 22.57630686469419 16.4294044951278 15.028588405971169 11 31.863034827600373 25.40164418892053 23.110778887880983 19.624542095598112 12 28.857064291516405 21.189397794473226 28.567071339846457 21.38646657416392 13 26.611238767711693 21.36924083480042 30.266888336120008 21.752632061367883 14 21.332102772869934 24.721306501215285 32.003527325711865 21.943063400202917 15 20.21732877773107 24.176562248132825 33.25926792188048 22.346841052255623 16 26.28758450884518 23.497014731958014 28.89104166732514 21.324359091871663 17 26.930784134619945 23.540790234744158 27.227730595757727 22.30069503487817 18 27.37075164276661 23.52419663260501 28.222872621188603 20.882179103439775 19 27.234526070919472 24.9920192675426 26.207777184271166 21.565677477266764 20 27.05958209408098 26.524161865057668 25.965826661651707 20.450429379209638 21 27.521674405079853 23.823671642640186 28.883297986326873 19.771355965953088 22 26.44751522660539 22.396305790060904 28.67943373147443 22.476745251859274 23 25.669512337738276 22.396937927285254 29.367357065871857 22.56619266910461 24 24.527872510564595 25.27790332725428 27.969859697143058 22.22436446503807 25 26.280789033683433 24.436370647340127 26.505987919857642 22.7768523991188 26 22.539168802763704 24.780253297385794 27.079810485260143 25.600767414590358 27 22.607123554381182 24.74833036755619 28.884246192163392 23.76029988589923 28 22.27525151159814 25.22448773179682 27.78653990208194 24.7137208545231 29 23.444547342337074 26.209673595944206 27.439970668832792 22.905808392885927 30 25.285330939640378 24.37315692490526 28.311845935515684 22.02966619993868 31 26.469165926539333 25.06266060236356 26.75599819208754 21.712175279009568 32 27.225518115472507 25.68547380265308 25.310616428614324 21.77839165326009 33 26.736876041050987 23.832047460862803 25.727036825154002 23.7040396729322 34 24.361620420560897 24.755125842717938 28.548897394646428 22.334356342074738 35 24.518074383587187 26.826007389684154 26.444670609095823 22.211247617632836 36 26.445460780626256 26.227057369613792 25.5818032978599 21.745678551900046 37 25.257991004687298 26.161631166893713 25.752164279821866 22.82821354859713 38 25.131563559817565 26.689307714918755 25.142151858325406 23.036976866938275 39 23.787323752240138 24.687803228324807 26.075976572994463 25.448896446440592 40 24.54430807839766 23.12310556375578 28.289088995439133 24.043497362407432 41 22.40831639732353 24.970368567608656 27.82146548372721 24.799849551340607 42 23.161823968747136 24.980482763198236 28.410933445432335 23.446759822622294 43 22.53822059692718 23.664056993492146 28.587773833943874 25.209948575636798 44 23.978545262605603 23.533046553745887 27.394772857291862 25.093635326356644 45 24.249416063239007 23.493379942918008 26.63684032529782 25.620363668545167 46 23.916437780313352 23.609535157892076 27.25870531975081 25.215321742043763 47 22.68835318770999 24.776934576957967 28.580978358782122 23.953733876549922 48 22.60364679964727 25.77413104836798 28.032283248047484 23.589938903937266 49 24.514439594547184 24.22128595675549 28.2734435991365 22.990830849560822 50 23.744812523902688 23.804865560215813 28.315796793167863 24.134525122713637 51 23.27086763994728 24.657144572943896 27.11758068441497 24.954407102693853 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 254.0 1 697.0 2 1140.0 3 2940.0 4 4740.0 5 3250.5 6 1761.0 7 1675.5 8 1590.0 9 1569.5 10 1549.0 11 1552.5 12 1556.0 13 1572.0 14 1588.0 15 1627.0 16 1666.0 17 1598.0 18 1530.0 19 1463.5 20 1397.0 21 1535.0 22 1673.0 23 2101.0 24 2529.0 25 3077.5 26 4178.0 27 4730.0 28 5525.5 29 6321.0 30 7285.5 31 8250.0 32 9966.5 33 11683.0 34 13230.5 35 14778.0 36 15882.5 37 16987.0 38 18418.0 39 19849.0 40 21741.0 41 23633.0 42 26400.0 43 29167.0 44 32271.0 45 35375.0 46 38654.5 47 41934.0 48 45354.0 49 48774.0 50 48264.5 51 47755.0 52 44980.5 53 42206.0 54 40632.5 55 39059.0 56 40167.5 57 41276.0 58 40989.0 59 40702.0 60 37247.5 61 33793.0 62 30383.5 63 26974.0 64 24360.0 65 21746.0 66 18724.0 67 15702.0 68 13940.5 69 12179.0 70 10523.0 71 8867.0 72 7394.0 73 5921.0 74 4996.5 75 3141.5 76 2211.0 77 1661.5 78 1112.0 79 798.5 80 485.0 81 380.0 82 275.0 83 228.0 84 181.0 85 131.0 86 81.0 87 59.0 88 37.0 89 30.0 90 23.0 91 21.5 92 20.0 93 14.5 94 9.0 95 7.5 96 6.0 97 3.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 632774.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.7010373243303 #Duplication Level Percentage of deduplicated Percentage of total 1 72.19907094094678 24.331835845628188 2 8.73399174908754 5.8868916385278425 3 4.06665899315652 4.111518795410742 4 2.50359783713428 3.374953766175 5 1.7159712563725762 2.8915005679245076 6 1.1863952496466155 2.3989650353849252 7 0.8890840829468404 2.097413910470161 8 0.6935569448883498 1.869887078898462 9 0.594387856875408 1.8028338614718138 >10 7.3452114604311225 48.15240275352204 >50 0.04789408862713316 1.0877021874912236 >100 0.02371454873517632 1.5802317904844692 >500 0.0 0.0 >1k 4.64991151670124E-4 0.41386276861061916 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2641 0.4173686023762039 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06542620272008648 0.0 2 0.0 0.0 0.0 0.2621789137986074 0.0 3 0.0 0.0 0.0 0.36537531567352644 0.0 4 0.0 0.0 0.0 0.5126632889467646 0.0 5 0.0 0.0 0.0 0.9164409409994722 0.0 6 0.0 0.0 0.0 1.3285944112747996 0.0 7 0.0 0.0 0.0 1.6555673905691448 0.0 8 1.580343060871654E-4 0.0 0.0 2.2064749815890035 0.0 9 1.580343060871654E-4 0.0 0.0 2.5032634084207 0.0 10 1.580343060871654E-4 0.0 0.0 2.9825814587830726 0.0 11 1.580343060871654E-4 0.0 0.0 3.616299026192606 0.0 12 3.160686121743308E-4 0.0 0.0 4.109998198408911 0.0 13 3.160686121743308E-4 0.0 0.0 4.3611147107814165 0.0 14 3.160686121743308E-4 0.0 0.0 4.49971079721986 0.0 15 3.160686121743308E-4 0.0 0.0 4.631037305578295 0.0 16 3.160686121743308E-4 0.0 0.0 4.899221523008214 0.0 17 3.160686121743308E-4 0.0 0.0 5.2042277337564435 0.0 18 3.160686121743308E-4 0.0 0.0 5.58635468587521 0.0 19 3.160686121743308E-4 0.0 0.0 5.796856381583314 0.0 20 3.160686121743308E-4 0.0 0.0 6.042283658936682 0.0 21 3.160686121743308E-4 0.0 0.0 6.323426689465749 0.0 22 3.160686121743308E-4 0.0 0.0 6.631909654947896 0.0 23 3.160686121743308E-4 0.0 0.0 6.924273121209152 0.0 24 3.160686121743308E-4 0.0 0.0 7.158479962830331 0.0 25 3.160686121743308E-4 0.0 0.0 7.368665589926261 0.0 26 3.160686121743308E-4 0.0 0.0 7.574900359370012 0.0 27 3.160686121743308E-4 0.0 0.0 7.8193794308868565 0.0 28 3.160686121743308E-4 0.0 0.0 8.038731047735842 0.0 29 3.160686121743308E-4 0.0 0.0 8.285422599537908 0.0 30 3.160686121743308E-4 0.0 0.0 8.615714299260084 0.0 31 3.160686121743308E-4 0.0 0.0 8.870307566366506 0.0 32 3.160686121743308E-4 0.0 0.0 9.117947324005096 0.0 33 3.160686121743308E-4 0.0 0.0 9.388502056026322 0.0 34 4.741029182614962E-4 0.0 0.0 9.687502963143238 0.0 35 4.741029182614962E-4 0.0 0.0 9.989190453463637 0.0 36 4.741029182614962E-4 0.0 0.0 10.248050646834415 0.0 37 4.741029182614962E-4 0.0 0.0 10.54215249046263 0.0 38 4.741029182614962E-4 0.0 0.0 10.898203782077013 0.0 39 4.741029182614962E-4 0.0 0.0 11.550569397604832 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATGCG 25 3.88881E-5 45.000004 1 TCCGAAA 20 7.0308807E-4 45.0 24 TACGGGT 35 1.2107739E-7 45.0 4 TATGTCG 20 7.0308807E-4 45.0 1 ATCGCTC 35 1.2107739E-7 45.0 42 TACGCGG 50 1.0804797E-9 40.500004 2 GTCGTTT 45 1.925946E-8 40.000004 9 TTTACGG 40 3.454934E-7 39.375 2 CGTGATA 35 6.2438394E-6 38.571426 43 CTACCGG 35 6.2438394E-6 38.571426 2 TTAATCG 30 1.13934235E-4 37.499996 20 TACCAAT 30 1.13934235E-4 37.499996 13 ACAATCG 30 1.13934235E-4 37.499996 18 CGTACAT 30 1.13934235E-4 37.499996 35 ATAACGC 30 1.13934235E-4 37.499996 11 TAGTGCG 30 1.13934235E-4 37.499996 1 CGTTTTT 1335 0.0 37.41573 1 AACGGGA 135 0.0 36.666664 4 ACGGGTA 80 0.0 36.5625 5 TCCGAAT 25 0.002106394 36.000004 24 >>END_MODULE