##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936701.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 793723 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.189694641581507 31.0 31.0 33.0 28.0 34.0 2 31.24881728260363 31.0 31.0 34.0 28.0 34.0 3 30.999623294272688 31.0 31.0 34.0 28.0 34.0 4 34.97135902575584 35.0 35.0 37.0 32.0 37.0 5 35.212804719026664 35.0 35.0 37.0 33.0 37.0 6 35.19611627734109 37.0 35.0 37.0 32.0 37.0 7 31.049107812171247 35.0 35.0 37.0 0.0 37.0 8 33.10671355120111 36.0 35.0 37.0 17.0 37.0 9 36.4665015376901 39.0 35.0 39.0 32.0 39.0 10 36.151368928454886 37.0 35.0 39.0 32.0 39.0 11 36.464190907911195 38.0 35.0 39.0 32.0 39.0 12 36.5693850373493 38.0 35.0 39.0 32.0 39.0 13 36.59803105113497 39.0 35.0 39.0 32.0 39.0 14 37.704640031849905 39.0 37.0 41.0 33.0 41.0 15 37.872629368180085 40.0 37.0 41.0 33.0 41.0 16 37.74587608019422 39.0 37.0 41.0 33.0 41.0 17 37.65599585749688 39.0 36.0 41.0 33.0 41.0 18 37.55465067788133 39.0 36.0 40.0 33.0 41.0 19 37.33017690050559 39.0 36.0 40.0 32.0 41.0 20 37.30821583852301 39.0 35.0 40.0 32.0 41.0 21 37.30978691558642 39.0 35.0 40.0 32.0 41.0 22 37.3875734985631 39.0 35.0 40.0 32.0 41.0 23 37.41617037681912 39.0 35.0 41.0 33.0 41.0 24 37.359702314283446 39.0 35.0 41.0 32.0 41.0 25 37.03894053718992 39.0 35.0 40.0 32.0 41.0 26 37.025891904354545 39.0 35.0 40.0 32.0 41.0 27 37.047379249435885 39.0 35.0 40.0 32.0 41.0 28 37.03821736298431 39.0 35.0 40.0 32.0 41.0 29 37.0026621377987 39.0 35.0 40.0 31.0 41.0 30 36.76169394108524 39.0 35.0 40.0 31.0 41.0 31 36.72832083737022 39.0 35.0 40.0 31.0 41.0 32 36.548732996272 39.0 35.0 40.0 30.0 41.0 33 36.39589882112526 39.0 35.0 40.0 30.0 41.0 34 36.27937202273337 39.0 35.0 40.0 30.0 41.0 35 36.18363585281011 39.0 35.0 40.0 30.0 41.0 36 36.10585304948956 39.0 35.0 40.0 29.0 41.0 37 36.040894619407524 39.0 35.0 40.0 29.0 41.0 38 35.928517883442964 39.0 35.0 40.0 29.0 41.0 39 35.88698576203537 39.0 35.0 40.0 29.0 41.0 40 35.80615025644967 39.0 35.0 40.0 28.0 41.0 41 35.638589281147205 38.0 35.0 40.0 27.0 41.0 42 35.630005682083045 38.0 35.0 40.0 27.0 41.0 43 35.561564928822776 38.0 35.0 40.0 27.0 41.0 44 35.36495099675832 38.0 34.0 40.0 26.0 41.0 45 35.29599873003554 38.0 34.0 40.0 26.0 41.0 46 35.19357634842382 38.0 34.0 40.0 26.0 41.0 47 35.15757764358599 38.0 34.0 40.0 26.0 41.0 48 35.08211806889809 38.0 34.0 40.0 26.0 41.0 49 34.954371991236236 38.0 34.0 40.0 26.0 41.0 50 34.825001921325196 37.0 34.0 40.0 24.0 41.0 51 33.19629392117905 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 30.0 9 74.0 10 73.0 11 65.0 12 48.0 13 46.0 14 44.0 15 67.0 16 120.0 17 227.0 18 414.0 19 716.0 20 1205.0 21 1745.0 22 2661.0 23 3950.0 24 5758.0 25 8280.0 26 10447.0 27 11769.0 28 12789.0 29 14442.0 30 17193.0 31 21158.0 32 27396.0 33 37568.0 34 57507.0 35 65465.0 36 78837.0 37 119275.0 38 161175.0 39 133168.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.053238976317935 20.53461976029421 23.020121629334163 15.392019634053694 2 34.60149195626182 23.397457299334906 24.720840897895112 17.280209846508164 3 32.20279618960267 22.728710141951286 28.928858052494384 16.13963561595166 4 28.92205467146599 25.202873042610584 27.21629586140253 18.658776424520898 5 25.05193877461029 29.73379881898345 26.715743401665314 18.49851900474095 6 25.7671757023546 34.04185087240763 26.309934322175373 13.881039103062404 7 68.81708102196862 17.746241446953157 9.66382478522104 3.7728527458571817 8 80.80917398135118 5.379080611245988 10.0417903979096 3.769955009493237 9 74.98648772934638 7.681899100819807 11.848466026560905 5.483147143272905 10 38.63262120412285 27.473816432180996 19.14080856923637 14.75275379445978 11 29.983634088970586 26.084162862862737 25.543924013793223 18.388279034373454 12 27.85593966660913 22.92764604276303 29.86596079488688 19.350453495740958 13 24.85350682794879 22.792082376345398 31.45152654011538 20.902884255590426 14 21.040085772996374 25.918613924505145 31.353885423504167 21.68741487899431 15 20.75724150616777 25.808499942675216 33.17542769958789 20.258830851569122 16 24.117607780044175 24.66162628524057 31.360562815995003 19.86020311872026 17 23.767989588307255 24.944722529144297 29.7024276731303 21.584860209418146 18 24.362529497066358 25.170493988456933 30.063132856172746 20.403843658303966 19 24.516991444118414 26.615834491377978 28.3261288887937 20.54104517570991 20 25.402060920497455 25.821350773506623 28.9284800868817 19.848108219114224 21 24.863459922416258 26.276295382646087 29.60264475138052 19.257599943557135 22 24.34413517058218 24.11748179150661 29.23601810707262 22.302364930838593 23 23.303469850313018 25.794263237930615 29.66412715771119 21.238139754045175 24 23.27134277323449 24.727266313310814 29.959066324145827 22.042324589308866 25 22.983584953440936 25.78443613200071 28.74189106275111 22.490087851807242 26 21.87035023553557 27.029454860196818 28.951410000718138 22.148784903549476 27 22.598941948261547 25.954898623323253 29.10927363828439 22.336885790130815 28 21.241037490409123 27.056920361385522 30.097149761314718 21.60489238689064 29 22.395974414247792 26.204229939160133 29.61373174268605 21.786063903906022 30 22.8856918597546 25.93096080118631 29.899473745878602 21.28387359318049 31 23.448104691435173 25.85700552963691 28.415706739000886 22.279183039927027 32 23.986831678053928 26.52499675579516 28.07704955003194 21.411122016118973 33 23.249798733311245 25.4466608627947 28.585791264710736 22.717749139183315 34 21.65843751535485 25.859147334775486 29.97670471940463 22.505710430465037 35 22.146517109873344 25.58890192170316 28.58062573467066 23.683955233752833 36 22.16932103517222 27.446728896604988 28.510450119248148 21.873499948974644 37 22.90068449572458 26.903970276784218 28.361027713698604 21.834317513792595 38 21.663729033932494 27.167538297365706 28.166753388776687 23.00197927992511 39 22.320255303172516 25.1760374841097 28.754489916507396 23.74921729621039 40 23.225608934099178 25.094270923231406 29.222789310628517 22.4573308320409 41 20.374488329051825 26.213553090939783 29.411646128435237 24.000312451573155 42 22.092216050183755 26.177268392121682 28.74516676472775 22.985348792966818 43 22.113886078644565 25.55639687901195 28.853264929956673 23.476452112386813 44 21.999992440687745 25.978962433997754 28.673605275392045 23.347439849922456 45 22.22450401462475 25.44262922959269 28.137776025137235 24.195090730645326 46 22.084026795242167 26.87171721116813 27.777952761857726 23.26630323173198 47 21.442367173434562 25.593059543442738 30.000642541541573 22.96393074158113 48 21.416035569083924 25.281111924437116 30.05494360123116 23.2479089052478 49 21.33855261848277 25.186116567114723 30.067920420600135 23.407410393802373 50 20.258956840106688 24.815080323992124 30.547684771639478 24.378278064261714 51 20.32094320058761 24.24120253539333 30.069306294513325 25.368547969505734 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 301.0 1 836.5 2 1372.0 3 6440.5 4 11509.0 5 7820.5 6 4132.0 7 3792.5 8 3453.0 9 3432.0 10 3411.0 11 3360.5 12 3310.0 13 3150.5 14 2991.0 15 2943.0 16 2895.0 17 2886.5 18 2878.0 19 2895.5 20 2913.0 21 3008.0 22 3103.0 23 3410.0 24 3717.0 25 4303.0 26 5831.0 27 6773.0 28 8179.5 29 9586.0 30 11120.5 31 12655.0 32 14938.5 33 17222.0 34 20122.0 35 23022.0 36 24758.0 37 26494.0 38 28076.0 39 29658.0 40 32233.0 41 34808.0 42 38203.0 43 41598.0 44 45316.0 45 49034.0 46 55478.5 47 61923.0 48 63057.5 49 64192.0 50 63751.0 51 63310.0 52 57582.0 53 51854.0 54 49107.0 55 46360.0 56 44571.0 57 42782.0 58 40832.5 59 38883.0 60 37602.0 61 36321.0 62 32756.5 63 29192.0 64 25034.5 65 20877.0 66 17135.5 67 13394.0 68 10917.0 69 8440.0 70 6911.0 71 5382.0 72 4718.0 73 4054.0 74 3230.5 75 1840.5 76 1274.0 77 979.5 78 685.0 79 514.5 80 344.0 81 248.5 82 153.0 83 108.5 84 64.0 85 52.5 86 41.0 87 42.0 88 43.0 89 27.0 90 11.0 91 7.5 92 4.0 93 4.0 94 4.0 95 3.5 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 793723.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.86864985619097 #Duplication Level Percentage of deduplicated Percentage of total 1 72.67309495120551 26.066857967705104 2 9.146209429016013 6.561243670415354 3 4.1587468882589524 4.475059079264524 4 2.4827610973599827 3.5621315391111077 5 1.6515208383517115 2.961891134052025 6 1.2047974155721177 2.5928673988080053 7 0.8783019314620243 2.205245311333931 8 0.7089447169396211 2.0343111855442952 9 0.6194233141840785 1.9996090172307073 >10 6.399734732202488 43.46283196183822 >50 0.05648743182032278 1.3256311454277117 >100 0.016532899553482073 1.124376949588826 >500 0.002755483258912783 0.7156923051276679 >1k 3.444354073640979E-4 0.1331807880075308 >5k 3.444354073640979E-4 0.7790705465449808 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6306 0.7944837178713481 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTC 1078 0.13581564349275502 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCG 925 0.11653939724563858 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 818 0.10305862372641336 No Hit GCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 814 0.10255466957616195 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGC 802 0.10104280712540774 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2598853756285252E-4 0.0 0.0 0.07004962688494601 0.0 2 1.2598853756285252E-4 0.0 0.0 0.33500352137962486 0.0 3 1.2598853756285252E-4 0.0 0.0 0.5166789925452583 0.0 4 1.2598853756285252E-4 0.0 0.0 0.743206383083267 0.0 5 1.2598853756285252E-4 0.0 0.0 1.3427858333448823 0.0 6 1.2598853756285252E-4 0.0 0.0 1.9201913009954354 0.0 7 1.2598853756285252E-4 0.0 0.0 2.3309139334503346 0.0 8 1.2598853756285252E-4 0.0 0.0 2.9685419220559313 0.0 9 1.2598853756285252E-4 0.0 0.0 3.261213294814438 0.0 10 1.2598853756285252E-4 0.0 0.0 3.905140710298177 0.0 11 1.2598853756285252E-4 0.0 0.0 4.546044400880408 0.0 12 1.2598853756285252E-4 0.0 0.0 5.160238521499314 0.0 13 1.2598853756285252E-4 0.0 0.0 5.419018977653413 0.0 14 1.2598853756285252E-4 0.0 0.0 5.545385480828954 0.0 15 1.2598853756285252E-4 0.0 0.0 5.7271869405321505 0.0 16 1.2598853756285252E-4 0.0 0.0 6.060930576536147 0.0 17 1.2598853756285252E-4 0.0 0.0 6.428943094757239 0.0 18 1.2598853756285252E-4 0.0 0.0 6.861713721285637 0.0 19 1.2598853756285252E-4 0.0 0.0 7.103989679019003 0.0 20 1.2598853756285252E-4 0.0 0.0 7.377384805530393 0.0 21 1.2598853756285252E-4 0.0 0.0 7.707096808332378 0.0 22 1.2598853756285252E-4 0.0 0.0 8.049533653428211 0.0 23 1.2598853756285252E-4 0.0 0.0 8.407719065719402 0.0 24 1.2598853756285252E-4 0.0 0.0 8.691319263773382 0.0 25 1.2598853756285252E-4 0.0 0.0 8.9527454792163 0.0 26 1.2598853756285252E-4 0.0 0.0 9.194517482799414 0.0 27 1.2598853756285252E-4 0.0 0.0 9.456321663855022 0.0 28 1.2598853756285252E-4 0.0 0.0 9.741811689972446 0.0 29 1.2598853756285252E-4 0.0 0.0 10.028939567078186 0.0 30 1.2598853756285252E-4 0.0 0.0 10.368982629960326 0.0 31 1.2598853756285252E-4 0.0 0.0 10.67211105133655 0.0 32 1.2598853756285252E-4 0.0 0.0 10.985570532792927 0.0 33 1.2598853756285252E-4 0.0 0.0 11.295754312272669 0.0 34 1.2598853756285252E-4 0.0 0.0 11.592835283845876 0.0 35 1.2598853756285252E-4 0.0 0.0 11.915491928544341 0.0 36 1.2598853756285252E-4 0.0 0.0 12.218620349920565 0.0 37 1.2598853756285252E-4 0.0 0.0 12.54215891438197 0.0 38 1.2598853756285252E-4 0.0 0.0 12.877666389911846 0.0 39 1.2598853756285252E-4 0.0 0.0 13.20687443856358 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAGTA 25 3.8897102E-5 45.000004 37 CGCATTG 20 7.031966E-4 45.0 31 CACTCGA 20 7.031966E-4 45.0 41 CGTTTTT 3115 0.0 42.760834 1 CGAATAT 135 0.0 41.666664 14 CCATACG 55 6.002665E-11 40.90909 2 AACCCGC 50 1.0804797E-9 40.500004 21 TCACGAC 80 0.0 39.375 25 CGGTAGT 115 0.0 39.130432 12 TACGAAT 145 0.0 38.793102 12 ATAGGCG 35 6.2458457E-6 38.571426 5 TATAGCG 35 6.2458457E-6 38.571426 1 CGGATCT 30 1.13960356E-4 37.500004 12 ATAACGG 30 1.13960356E-4 37.500004 2 CCCGCAT 55 2.746674E-9 36.81818 23 CACGACG 80 0.0 36.5625 26 CGGCGTA 25 0.0021067162 36.000004 15 CAACGAT 25 0.0021067162 36.000004 37 CGACGGT 75 1.8189894E-12 36.000004 28 GCGCATC 25 0.0021067162 36.000004 25 >>END_MODULE