SRR2936699.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936699.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	307541
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC	6620	2.152558520652531	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG	6293	2.046231234209422	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC	4549	1.4791523731795109	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2482	0.8070468652960093	No Hit
GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	1649	0.5361886707788555	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT	1150	0.3739338819864668	No Hit
GAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT	953	0.30987738220269817	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC	898	0.29199358784682367	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTA	866	0.2815884711306785	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	577	0.18761726078799248	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTT	421	0.13689231679678482	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTT	393	0.1277878396701578	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC	381	0.12388592090160336	No Hit
CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	334	0.10860340572476515	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG	308	0.10014924839289721	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTGTCG	25	3.8841194E-5	45.000004	11
TGTGATC	25	3.8841194E-5	45.000004	19
TCACTTA	60	0.0	45.000004	5
GGTGCGT	25	3.8841194E-5	45.000004	9
GTTATCA	25	3.8841194E-5	45.000004	10
TATCATG	20	7.0252194E-4	45.0	43
CGGGTCA	20	7.0252194E-4	45.0	6
TCGTTCA	20	7.0252194E-4	45.0	16
CGAACGG	20	7.0252194E-4	45.0	2
CATATTC	20	7.0252194E-4	45.0	21
GTCGATG	20	7.0252194E-4	45.0	1
CCAATTC	20	7.0252194E-4	45.0	34
CACGCGT	20	7.0252194E-4	45.0	28
CGTTCAT	20	7.0252194E-4	45.0	17
TCTAGAC	20	7.0252194E-4	45.0	36
GGGCGTA	20	7.0252194E-4	45.0	38
TACCTCC	20	7.0252194E-4	45.0	25
GCGATGC	20	7.0252194E-4	45.0	9
GGTGATC	20	7.0252194E-4	45.0	8
ACATACG	45	3.8198777E-10	45.0	17