##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936699.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 307541 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.075921584439147 31.0 31.0 33.0 28.0 34.0 2 31.110616145489544 31.0 31.0 34.0 28.0 34.0 3 30.87182522005196 31.0 30.0 34.0 27.0 34.0 4 34.87012788538764 35.0 35.0 37.0 32.0 37.0 5 35.098448662129606 35.0 35.0 37.0 33.0 37.0 6 35.06436540168628 35.0 35.0 37.0 32.0 37.0 7 31.087828939881188 35.0 35.0 37.0 0.0 37.0 8 32.94202399029723 35.0 35.0 37.0 17.0 37.0 9 35.9528973372656 38.0 34.0 39.0 32.0 39.0 10 36.03114056337204 37.0 35.0 39.0 32.0 39.0 11 36.316725249641514 37.0 35.0 39.0 32.0 39.0 12 36.351296249930904 38.0 35.0 39.0 32.0 39.0 13 36.06983784275918 38.0 35.0 39.0 31.0 39.0 14 37.24320984844297 39.0 36.0 40.0 32.0 41.0 15 37.269934740408594 39.0 36.0 41.0 32.0 41.0 16 37.45129917636998 39.0 36.0 40.0 32.0 41.0 17 37.16321726208863 39.0 35.0 40.0 32.0 41.0 18 37.0757785140843 39.0 36.0 40.0 32.0 41.0 19 36.863143450791924 38.0 35.0 40.0 31.0 41.0 20 36.755554543946985 38.0 35.0 40.0 31.0 41.0 21 36.950354586868094 39.0 35.0 40.0 32.0 41.0 22 36.97424733612754 39.0 35.0 40.0 32.0 41.0 23 37.06298347212242 39.0 35.0 40.0 32.0 41.0 24 36.90576541014044 39.0 35.0 40.0 31.0 41.0 25 36.74872943770099 38.0 35.0 40.0 31.0 41.0 26 36.57439821031993 38.0 35.0 40.0 31.0 41.0 27 36.64538061591788 38.0 35.0 40.0 31.0 41.0 28 36.576196344552436 38.0 35.0 40.0 31.0 41.0 29 36.47433350350035 38.0 35.0 40.0 30.0 41.0 30 36.24627610627526 38.0 35.0 40.0 30.0 41.0 31 36.328843959016844 38.0 35.0 40.0 30.0 41.0 32 36.00223059689603 38.0 35.0 40.0 30.0 41.0 33 35.744469843045316 38.0 35.0 40.0 28.0 41.0 34 35.64125433682013 38.0 35.0 40.0 27.0 41.0 35 35.504446561596666 38.0 35.0 40.0 27.0 41.0 36 35.49464949388862 38.0 35.0 40.0 27.0 41.0 37 35.343707017926064 38.0 35.0 40.0 26.0 41.0 38 35.18772456355413 38.0 34.0 40.0 25.0 41.0 39 35.037312098224305 38.0 34.0 40.0 24.0 41.0 40 34.67261600892239 38.0 34.0 40.0 23.0 41.0 41 34.66895145687892 38.0 34.0 40.0 23.0 41.0 42 34.59417118367958 38.0 34.0 40.0 23.0 41.0 43 34.573851941692325 38.0 34.0 40.0 23.0 41.0 44 34.44081276967949 38.0 33.0 40.0 23.0 41.0 45 34.346070930380016 37.0 33.0 40.0 23.0 41.0 46 34.14055686884025 37.0 33.0 40.0 22.0 41.0 47 33.899723939247124 37.0 33.0 40.0 21.0 41.0 48 33.89271674345859 37.0 33.0 40.0 21.0 41.0 49 33.78641872140625 37.0 33.0 40.0 20.0 41.0 50 33.66292949557945 37.0 33.0 40.0 20.0 41.0 51 31.771633700872403 35.0 29.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 26.0 10 31.0 11 17.0 12 14.0 13 17.0 14 15.0 15 27.0 16 55.0 17 85.0 18 175.0 19 410.0 20 739.0 21 1109.0 22 1535.0 23 2161.0 24 3015.0 25 4049.0 26 5042.0 27 5792.0 28 6175.0 29 6894.0 30 8075.0 31 10148.0 32 12997.0 33 17301.0 34 25565.0 35 27236.0 36 28756.0 37 41892.0 38 54623.0 39 43554.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.82340891133215 17.198357292198438 19.626001086034055 14.352232710435356 2 31.007898133907347 30.744518617029925 21.451773909820155 16.795809339242574 3 29.198708464887606 30.51463056958259 26.454033771106943 13.832627194422859 4 26.547029501757493 22.371651259506862 34.32713036635766 16.75418887237799 5 30.113383256216242 26.37697087542799 24.731011474892778 18.778634393462987 6 23.23495078704953 37.92372399127271 26.204310969919458 12.637014251758302 7 61.95141460813355 17.05788821653048 17.292653662438504 3.698043512897467 8 68.9755187113263 12.827557951622712 13.048341521943415 5.14858181510758 9 63.85197420831694 7.961865247235328 13.870345742518882 14.315814801928846 10 38.9551311857606 26.034902663384717 20.77674196286024 14.233224187994445 11 33.169886291583886 23.170894287265764 25.85671503962073 17.80250438152962 12 30.232391778657153 20.268517043256022 29.842850221596468 19.656240956490354 13 23.833895318022638 23.784796173518327 34.39834038388378 17.98296812457526 14 19.740132210014274 30.680462117246154 27.357978285822053 22.221427386917515 15 16.479103599194904 24.888063705327095 40.715221710276026 17.917610985201975 16 19.522275078769987 24.47836223462888 32.40803665202363 23.591326034577502 17 19.165899831242015 24.128815344945878 33.01543534032861 23.689849483483503 18 20.474993578092025 25.19241336927434 31.632855456670818 22.699737595962816 19 21.95284531168202 27.72475865006617 28.16665095060496 22.15574508764685 20 25.78778114137627 24.670206574082805 32.533873532309514 17.00813875223141 21 23.652781255182237 29.561912070260547 27.657125391411224 19.128181283145988 22 20.412237717897778 24.332690600602845 30.292546359672368 24.96252532182701 23 21.308703554973157 28.993532569641122 29.972589020650904 19.725174854734817 24 23.535073372330846 22.735180024777186 29.12197072910604 24.607775873785933 25 20.000585287815284 30.44277023226171 27.481539046826274 22.075105433096727 26 19.55446590861056 26.196181972484972 31.06512627584615 23.18422584305832 27 22.572925235984794 27.430488942937693 26.950552934405493 23.046032886672023 28 18.140995834701716 26.627018836512857 32.94845240146842 22.283532927317008 29 23.043431607492984 24.145073339814854 30.674609239093325 22.136885813598838 30 19.86824520958181 26.80553162017422 30.434641234827225 22.891581935416742 31 25.36995067324357 24.4764112752446 24.80644857108483 25.347189480427 32 26.75675763556729 29.3863257256756 25.382306749343993 18.474609889413117 33 22.285809046598665 28.21477461541713 24.322285483886702 25.177130854097502 34 25.21419908239877 25.828426128548713 29.40095792105768 19.556416867994837 35 20.468165220247055 27.530963351227967 25.899961305972212 26.10091012255277 36 20.244455210849935 30.076965347709738 27.292621146448763 22.38595829499156 37 23.728218351374288 27.17166166462358 27.47178424990489 21.62833573409724 38 20.118618330564058 30.1458992459542 23.454433717780717 26.281048705701025 39 27.8704302840922 24.770355822475704 26.899827990414288 20.45938590301781 40 22.284833566906524 28.88135240504518 28.72267437512397 20.111139652924326 41 21.098975421163356 29.49037689283705 26.462162768541432 22.94848491745816 42 20.916560718733436 28.659593355032335 29.270893962105866 21.15295196412836 43 23.345179992261194 27.92863390572314 25.397264104623446 23.328921997392218 44 22.805739722508545 25.21322360270663 28.623500606423207 23.357536068361618 45 20.855755817923463 24.74954558904341 26.661160625737708 27.73353796729542 46 24.669231094390668 27.947493179771154 25.05519589258018 22.328079833258005 47 19.88385288465603 25.980926120419717 33.22288735485675 20.912333640067505 48 23.057088323182924 25.552365375673485 26.70863397075512 24.68191233038847 49 19.906288917575218 23.852429432173274 32.50460914154535 23.736672508706157 50 20.69610230831011 25.060723610835627 29.844150861185987 24.399023219668273 51 19.678026669614784 24.500798267548067 27.533239470509624 28.28793559232753 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 119.0 1 349.0 2 579.0 3 2664.5 4 4750.0 5 3240.5 6 1731.0 7 1662.5 8 1594.0 9 1491.0 10 1388.0 11 1358.0 12 1328.0 13 1233.0 14 1138.0 15 1132.5 16 1127.0 17 1037.5 18 948.0 19 934.0 20 920.0 21 1114.0 22 1308.0 23 1410.0 24 1512.0 25 1855.5 26 2588.0 27 2977.0 28 3311.0 29 3645.0 30 3949.5 31 4254.0 32 5074.5 33 5895.0 34 6857.0 35 7819.0 36 8120.5 37 8422.0 38 9585.5 39 10749.0 40 11935.0 41 13121.0 42 14304.0 43 15487.0 44 17756.5 45 20026.0 46 32701.0 47 45376.0 48 35375.5 49 25375.0 50 24735.5 51 24096.0 52 21676.0 53 19256.0 54 17520.0 55 15784.0 56 14569.5 57 13355.0 58 13094.0 59 12833.0 60 12740.0 61 12647.0 62 11458.0 63 10269.0 64 8170.5 65 6072.0 66 4666.5 67 3261.0 68 2683.5 69 2106.0 70 1759.0 71 1412.0 72 1280.0 73 1148.0 74 920.5 75 537.0 76 381.0 77 289.5 78 198.0 79 163.5 80 129.0 81 85.5 82 42.0 83 32.5 84 23.0 85 16.0 86 9.0 87 13.0 88 17.0 89 16.5 90 16.0 91 10.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 307541.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.82110794780196 #Duplication Level Percentage of deduplicated Percentage of total 1 75.39667822511996 24.74602514932352 2 8.319764936335979 5.461278061516418 3 3.469798447950084 3.4164788825185624 4 2.016806816642578 2.6477533695555557 5 1.4448597544348352 2.371094898487018 6 1.0129016386163907 1.9946732412920432 7 0.7739248441628083 1.778074959762734 8 0.6399378556066141 1.680277555099967 9 0.572944361346829 1.6924201858663859 >10 6.186399238486251 40.99745962752761 >50 0.12398795952356474 2.613947407489813 >100 0.031996892780274774 2.0557145713140224 >500 0.003999611597534347 1.081022317673753 >1k 0.003999611597534347 3.2260016341023054 >5k 0.0019998057987671734 4.2377781384703015 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 6620 2.152558520652531 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 6293 2.046231234209422 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC 4549 1.4791523731795109 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2482 0.8070468652960093 No Hit GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 1649 0.5361886707788555 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT 1150 0.3739338819864668 No Hit GAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 953 0.30987738220269817 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC 898 0.29199358784682367 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTA 866 0.2815884711306785 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 577 0.18761726078799248 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTT 421 0.13689231679678482 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTT 393 0.1277878396701578 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 381 0.12388592090160336 No Hit CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 334 0.10860340572476515 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 308 0.10014924839289721 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10665244634048794 0.0 2 0.0 0.0 0.0 1.0580703060730114 0.0 3 0.0 0.0 0.0 1.2573933231666672 0.0 4 0.0 0.0 0.0 1.8517856155764598 0.0 5 0.0 0.0 0.0 4.347387827964401 0.0 6 0.0 0.0 0.0 4.901785452996511 0.0 7 0.0 0.0 0.0 5.683469846296917 0.0 8 0.0 0.0 0.0 6.637163825311097 0.0 9 0.0 0.0 0.0 6.868027352450568 0.0 10 0.0 0.0 0.0 9.862099687521338 0.0 11 0.0 0.0 0.0 10.603464253546681 0.0 12 0.0 0.0 0.0 13.84400779083114 0.0 13 0.0 0.0 0.0 14.240702865634175 0.0 14 0.0 0.0 0.0 14.480345710002894 0.0 15 0.0 0.0 0.0 15.027264657395275 0.0 16 0.0 0.0 0.0 15.538741175973286 0.0 17 0.0 0.0 0.0 16.05411961331985 0.0 18 0.0 0.0 0.0 16.576651568408764 0.0 19 0.0 0.0 0.0 16.997083315720506 0.0 20 0.0 0.0 0.0 17.35215792365896 0.0 21 0.0 0.0 0.0 17.734545962977293 0.0 22 0.0 0.0 0.0 18.168309266081597 0.0 23 0.0 0.0 0.0 18.56532950078201 0.0 24 0.0 0.0 0.0 18.89471647682748 0.0 25 0.0 0.0 0.0 19.171102389600087 0.0 26 0.0 0.0 0.0 19.431555467401093 0.0 27 0.0 0.0 0.0 19.726800654221712 0.0 28 0.0 0.0 0.0 20.00286140709694 0.0 29 0.0 0.0 0.0 20.294204675149004 0.0 30 0.0 0.0 0.0 20.64147544555035 0.0 31 0.0 0.0 0.0 20.96435922364823 0.0 32 0.0 0.0 0.0 21.27358628605617 0.0 33 0.0 0.0 0.0 21.56005215564754 0.0 34 0.0 0.0 0.0 21.867978578465962 0.0 35 0.0 0.0 0.0 22.1915126763586 0.0 36 0.0 0.0 0.0 22.522200291993588 0.0 37 0.0 0.0 0.0 22.831427354401526 0.0 38 0.0 0.0 0.0 23.14585697516754 0.0 39 0.0 0.0 0.0 23.479796189776323 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTGTCG 25 3.8841194E-5 45.000004 11 TGTGATC 25 3.8841194E-5 45.000004 19 TCACTTA 60 0.0 45.000004 5 GGTGCGT 25 3.8841194E-5 45.000004 9 GTTATCA 25 3.8841194E-5 45.000004 10 TATCATG 20 7.0252194E-4 45.0 43 CGGGTCA 20 7.0252194E-4 45.0 6 TCGTTCA 20 7.0252194E-4 45.0 16 CGAACGG 20 7.0252194E-4 45.0 2 CATATTC 20 7.0252194E-4 45.0 21 GTCGATG 20 7.0252194E-4 45.0 1 CCAATTC 20 7.0252194E-4 45.0 34 CACGCGT 20 7.0252194E-4 45.0 28 CGTTCAT 20 7.0252194E-4 45.0 17 TCTAGAC 20 7.0252194E-4 45.0 36 GGGCGTA 20 7.0252194E-4 45.0 38 TACCTCC 20 7.0252194E-4 45.0 25 GCGATGC 20 7.0252194E-4 45.0 9 GGTGATC 20 7.0252194E-4 45.0 8 ACATACG 45 3.8198777E-10 45.0 17 >>END_MODULE