##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936690.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 463255 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.164973934442155 31.0 31.0 33.0 28.0 34.0 2 31.190627192367057 31.0 31.0 34.0 28.0 34.0 3 30.979866380287316 31.0 31.0 34.0 28.0 34.0 4 34.93527322964674 35.0 35.0 37.0 32.0 37.0 5 35.159050630862055 35.0 35.0 37.0 33.0 37.0 6 35.11989940745378 36.0 35.0 37.0 32.0 37.0 7 30.955775976514015 35.0 35.0 37.0 0.0 37.0 8 32.95514781275971 35.0 35.0 37.0 17.0 37.0 9 36.18330940842517 39.0 35.0 39.0 32.0 39.0 10 36.08407032843682 37.0 35.0 39.0 32.0 39.0 11 36.32205588714639 37.0 35.0 39.0 32.0 39.0 12 36.39377880433023 38.0 35.0 39.0 32.0 39.0 13 36.252182923012164 38.0 35.0 39.0 32.0 39.0 14 37.38018801739862 39.0 36.0 40.0 32.0 41.0 15 37.48411997711843 39.0 36.0 41.0 32.0 41.0 16 37.51436897604991 39.0 36.0 41.0 33.0 41.0 17 37.335486934841505 39.0 36.0 41.0 32.0 41.0 18 37.22758523923109 39.0 36.0 40.0 32.0 41.0 19 37.031105978348855 39.0 35.0 40.0 31.0 41.0 20 36.96781038520901 39.0 35.0 40.0 31.0 41.0 21 37.08109140754012 39.0 35.0 40.0 32.0 41.0 22 37.17300838630992 39.0 35.0 40.0 32.0 41.0 23 37.22707148330833 39.0 35.0 40.0 32.0 41.0 24 37.11324000820282 39.0 35.0 40.0 32.0 41.0 25 36.88304497522962 39.0 35.0 40.0 31.0 41.0 26 36.762884372537805 39.0 35.0 40.0 31.0 41.0 27 36.805295139825795 39.0 35.0 40.0 31.0 41.0 28 36.723627375851315 39.0 35.0 40.0 31.0 41.0 29 36.67709576798955 39.0 35.0 40.0 31.0 41.0 30 36.49306105708519 39.0 35.0 40.0 30.0 41.0 31 36.42503588736225 38.0 35.0 40.0 30.0 41.0 32 36.28372494630387 38.0 35.0 40.0 30.0 41.0 33 36.131735221422325 38.0 35.0 40.0 30.0 41.0 34 36.03826186441593 38.0 35.0 40.0 30.0 41.0 35 35.99967836288869 39.0 35.0 40.0 29.0 41.0 36 35.86156436519843 38.0 35.0 40.0 29.0 41.0 37 35.834192831162106 38.0 35.0 40.0 29.0 41.0 38 35.60265728378539 38.0 35.0 40.0 27.0 41.0 39 35.64262663112109 38.0 35.0 40.0 28.0 41.0 40 35.54117062956687 38.0 35.0 40.0 27.0 41.0 41 35.39176911204412 38.0 34.0 40.0 26.0 41.0 42 35.43066777476768 38.0 34.0 40.0 27.0 41.0 43 35.39105460275658 38.0 34.0 40.0 27.0 41.0 44 35.22935316402413 38.0 34.0 40.0 26.0 41.0 45 35.12762517404022 38.0 34.0 40.0 26.0 41.0 46 35.03617014387324 38.0 34.0 40.0 26.0 41.0 47 34.91657726306246 38.0 34.0 40.0 25.0 41.0 48 34.8413573517825 37.0 34.0 40.0 25.0 41.0 49 34.72415408360406 37.0 34.0 40.0 24.0 41.0 50 34.55301723672707 37.0 34.0 40.0 24.0 41.0 51 32.75310574089864 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 15.0 9 28.0 10 52.0 11 35.0 12 27.0 13 17.0 14 25.0 15 45.0 16 70.0 17 121.0 18 262.0 19 531.0 20 861.0 21 1372.0 22 1971.0 23 2594.0 24 3518.0 25 4884.0 26 6093.0 27 6969.0 28 7866.0 29 8969.0 30 10898.0 31 13844.0 32 18122.0 33 24693.0 34 37533.0 35 40381.0 36 45012.0 37 66176.0 38 89047.0 39 71215.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.65500642194903 18.792241853838597 22.751400416617198 14.801351307595171 2 30.871550226117368 28.300827837799915 23.760347972498945 17.06727396358377 3 30.42946109594068 27.651725291686002 26.736030911700897 15.182782700672416 4 28.627645681104358 23.47195389148525 30.51300039934809 17.3874000280623 5 27.38988246214288 28.326083906271926 24.661363611833657 19.62267001975154 6 25.301399876957614 36.801113857378766 24.762387885721687 13.135098379941931 7 65.96993016805 17.519508693915878 13.029109237892737 3.4814519001413906 8 75.92945569934486 9.256025299241239 10.603231481581417 4.2112875198324895 9 70.42665486611045 7.301162426741212 12.030091418333315 10.242091288815015 10 41.19653322684051 25.077117354372863 19.223969520026767 14.502379898759862 11 33.08976697499217 24.161854702053944 24.99660014462877 17.75177817832511 12 31.194266656593022 20.994916406730635 28.494241832252214 19.316575104424132 13 24.853914150953578 23.43655222285782 31.73392623932823 19.975607386860368 14 20.255582778383395 29.173349451166203 27.678060679323487 22.89300709112692 15 18.76331610020399 25.47927167542714 37.076987836073 18.68042438829586 16 21.100689684946737 24.22596626048289 32.91729177235 21.756052282220377 17 21.290002266570248 24.480037992034624 30.65719743985494 23.572762301540187 18 21.736408673408814 26.390217051084175 29.47037808550366 22.402996190003346 19 23.914043021661936 27.340449644364334 27.069756397664353 21.675750936309377 20 26.689836051418762 25.397675146517578 29.79201519681385 18.12047360524981 21 25.32795112842819 27.165168211891938 27.835425413649066 19.671455246030803 22 22.334567354912522 23.982255992919665 28.10244897518645 25.580727676981358 23 23.339845225631674 27.38621277698028 28.67988472871313 20.59405726867492 24 23.803952466783954 24.263310703608166 28.67945300104694 23.253283828560946 25 22.62576766575644 28.515396487895433 26.750277924685108 22.108557921663017 26 21.55184509611337 26.41245102589287 28.66693289872748 23.36877097926628 27 23.743294729684514 26.85713052206668 27.58178540976352 21.817789338485284 28 20.240256446233715 26.454544473346214 31.912445629297036 21.39275345112303 29 24.587322317082386 25.933233316423998 28.244703241195452 21.23474112529816 30 24.951700467345198 25.47495439876526 29.091537058423544 20.481808075465995 31 24.840962320967932 25.575762808820198 27.037160958867148 22.546113911344722 32 26.40619097473314 28.138929962979354 26.57801858587603 18.87686047641148 33 25.216565390551636 26.71660316672243 25.155044198119825 22.911787244606103 34 24.827794627149196 25.938845776084445 27.2176231233338 22.01573647343256 35 24.52321075865344 25.11726802732836 27.129118951765225 23.230402262252973 36 24.550409601623297 28.83012595654661 26.586221411533607 20.03324303029649 37 23.9334707666404 29.05462434296446 27.664677121671648 19.347227768723492 38 23.613776429828064 27.152216381906292 26.77682917615568 22.45717801210996 39 23.936708724136814 26.72718049454404 25.9442423719118 23.391868409407344 40 24.855641061618332 24.226829715815263 30.616615039233253 20.300914183333155 41 20.30760596215907 28.282479411986916 27.383190683316965 24.02672394253705 42 21.718060247595815 26.41590484722237 29.907502347519184 21.95853255766263 43 23.689328771410995 27.019028396887247 26.155357200677816 23.136285631023952 44 23.11556270304692 25.97359985321259 27.630138908376594 23.280698535363893 45 21.956805646997875 24.477447626037495 26.924695901825128 26.6410508251395 46 24.341237547355128 28.063161757563325 25.284994225642464 22.31060646943908 47 22.107910330163733 25.102157559011772 31.29399574748249 21.495936363342004 48 22.200084186894905 25.053588196565606 28.449558018801742 24.296769597737747 49 21.18703521818437 24.86017420211331 31.180667235108096 22.77212334459423 50 20.644353541785843 24.402974603620038 30.012196306569816 24.940475548024306 51 21.169334383870655 24.164013340384884 27.95004910902203 26.71660316672243 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 149.0 1 506.0 2 863.0 3 3170.0 4 5477.0 5 3812.0 6 2147.0 7 2033.5 8 1920.0 9 1833.0 10 1746.0 11 1675.0 12 1604.0 13 1547.5 14 1491.0 15 1564.0 16 1637.0 17 1555.5 18 1474.0 19 1577.0 20 1680.0 21 1711.5 22 1743.0 23 1875.0 24 2007.0 25 2662.5 26 3445.0 27 3572.0 28 4462.5 29 5353.0 30 6411.5 31 7470.0 32 8162.5 33 8855.0 34 10001.5 35 11148.0 36 12512.5 37 13877.0 38 14831.5 39 15786.0 40 17966.0 41 20146.0 42 21648.5 43 23151.0 44 26506.5 45 29862.0 46 41916.5 47 53971.0 48 45446.5 49 36922.0 50 35424.5 51 33927.0 52 31178.5 53 28430.0 54 26565.0 55 24700.0 56 24650.0 57 24600.0 58 23653.5 59 22707.0 60 22422.5 61 22138.0 62 20116.0 63 18094.0 64 15121.0 65 12148.0 66 9505.0 67 6862.0 68 5627.0 69 4392.0 70 3654.0 71 2916.0 72 2490.0 73 2064.0 74 1682.5 75 1090.5 76 880.0 77 635.5 78 391.0 79 272.0 80 153.0 81 114.5 82 76.0 83 62.0 84 48.0 85 39.0 86 30.0 87 21.5 88 13.0 89 10.0 90 7.0 91 5.5 92 4.0 93 4.5 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 463255.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.237934702521645 #Duplication Level Percentage of deduplicated Percentage of total 1 74.05522484740136 22.39277053316281 2 8.505960570380914 5.144053606188037 3 3.54983864791862 3.2201936772075292 4 2.0505820489709907 2.4802146439579142 5 1.5388819699764282 2.326630626151756 6 1.080685997612802 1.9606627577847227 7 0.824137244636261 1.7444145732459158 8 0.6569387829229617 1.5891577617262849 9 0.5623623696225013 1.5304208950620484 >10 6.921424203416544 45.941068291180684 >50 0.20960916034422736 3.862809238392436 >100 0.035054091661662595 2.1296610265987304 >500 0.004292337754489298 0.8075190058195085 >1k 0.002861558502992865 1.4091022780359705 >5k 0.002146168877244649 3.4613210854856566 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCG 5672 1.2243796613096458 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGC 5242 1.1315582130791895 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 5087 1.0980993189496067 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2807 0.6059297794950945 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 1589 0.3430076307864999 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCT 1074 0.2318377567430465 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCT 1044 0.22536184175022395 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTC 818 0.17657661547096093 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTA 729 0.1573647343255874 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTT 573 0.12368997636291028 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCG 570 0.12304238486362802 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGC 524 0.11311264854130015 No Hit GAATCTATCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 519 0.11203332937582973 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 472 0.10188772922040776 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1586383309408425E-4 0.0 0.0 0.07706338841458808 0.0 2 2.1586383309408425E-4 0.0 0.0 0.6624861037657446 0.0 3 2.1586383309408425E-4 0.0 0.0 0.8129431954323213 0.0 4 2.1586383309408425E-4 0.0 0.0 1.2312873039686565 0.0 5 2.1586383309408425E-4 0.0 0.0 2.8811345803067425 0.0 6 2.1586383309408425E-4 0.0 0.0 3.3394134979654835 0.0 7 2.1586383309408425E-4 0.0 0.0 3.863962612384108 0.0 8 2.1586383309408425E-4 0.0 0.0 4.586674725583102 0.0 9 2.1586383309408425E-4 0.0 0.0 4.783326677531813 0.0 10 4.317276661881685E-4 0.0 0.0 6.644504646469008 0.0 11 4.317276661881685E-4 0.0 0.0 7.25561515795836 0.0 12 4.317276661881685E-4 0.0 0.0 9.128449773882634 0.0 13 4.317276661881685E-4 0.0 0.0 9.442531651034528 0.0 14 4.317276661881685E-4 0.0 0.0 9.593204606534199 0.0 15 4.317276661881685E-4 0.0 0.0 9.943983335312085 0.0 16 4.317276661881685E-4 0.0 0.0 10.336639647710225 0.0 17 4.317276661881685E-4 0.0 0.0 10.735771875101186 0.0 18 4.317276661881685E-4 0.0 0.0 11.203117073749878 0.0 19 4.317276661881685E-4 0.0 0.0 11.545045385370909 0.0 20 4.317276661881685E-4 0.0 0.0 11.821998683230618 0.0 21 4.317276661881685E-4 0.0 0.0 12.160689037355237 0.0 22 4.317276661881685E-4 0.0 0.0 12.53564451543966 0.0 23 4.317276661881685E-4 0.0 0.0 12.891172248545617 0.0 24 4.317276661881685E-4 0.0 0.0 13.17935046572622 0.0 25 4.317276661881685E-4 0.0 0.0 13.41615309063043 0.0 26 4.317276661881685E-4 0.0 0.0 13.64129906854756 0.0 27 4.317276661881685E-4 0.0 0.0 13.916525455742518 0.0 28 4.317276661881685E-4 0.0 0.0 14.165848182966185 0.0 29 4.317276661881685E-4 0.0 0.0 14.41452331869057 0.0 30 6.475914992822528E-4 0.0 0.0 14.707234676366149 0.0 31 6.475914992822528E-4 0.0 0.0 14.999946034041727 0.0 32 6.475914992822528E-4 0.0 0.0 15.287044932056858 0.0 33 6.475914992822528E-4 0.0 0.0 15.551693991430206 0.0 34 6.475914992822528E-4 0.0 0.0 15.834907340449645 0.0 35 6.475914992822528E-4 0.0 0.0 16.13646911528208 0.0 36 6.475914992822528E-4 0.0 0.0 16.424647332462683 0.0 37 6.475914992822528E-4 0.0 0.0 16.72772015412678 0.0 38 6.475914992822528E-4 0.0 0.0 17.0370530269506 0.0 39 6.475914992822528E-4 0.0 0.0 17.344874852942763 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGA 20 7.02892E-4 45.000004 18 ACCGGGT 20 7.02892E-4 45.000004 4 ATCAGCT 20 7.02892E-4 45.000004 16 CGCGATC 20 7.02892E-4 45.000004 34 ATCCGCG 20 7.02892E-4 45.000004 43 CCGCGAT 20 7.02892E-4 45.000004 33 AATCGTC 20 7.02892E-4 45.000004 14 GTAAATC 20 7.02892E-4 45.000004 13 TGCAACG 20 7.02892E-4 45.000004 1 GGCCGAT 35 1.209828E-7 45.0 8 ACGGGTA 25 3.8871876E-5 45.0 5 AACGGCT 70 0.0 45.0 7 GACGGTC 25 3.8871876E-5 45.0 29 CCCGCGA 25 3.8871876E-5 45.0 32 CGTTTTT 1555 0.0 41.816723 1 ACGGCTG 630 0.0 41.785713 8 TACGGCT 555 0.0 41.756756 7 AACACGT 60 3.6379788E-12 41.250004 41 CGTCATA 55 6.002665E-11 40.909092 38 AAACGGC 90 0.0 40.0 6 >>END_MODULE