##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936685.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 268493 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.023892615449938 31.0 31.0 33.0 28.0 34.0 2 31.071256978766673 31.0 31.0 34.0 28.0 34.0 3 30.783968297125064 31.0 30.0 34.0 27.0 34.0 4 34.7791041107217 35.0 35.0 37.0 32.0 37.0 5 35.048016149396815 35.0 35.0 37.0 33.0 37.0 6 35.006651942508746 35.0 35.0 37.0 32.0 37.0 7 31.161438100807096 35.0 35.0 37.0 0.0 37.0 8 32.99074836215469 35.0 35.0 37.0 17.0 37.0 9 35.98077044839158 38.0 34.0 39.0 32.0 39.0 10 36.02238047174414 37.0 35.0 39.0 32.0 39.0 11 36.28154179066121 37.0 35.0 39.0 32.0 39.0 12 36.26675555787302 37.0 35.0 39.0 32.0 39.0 13 35.95416640284849 38.0 35.0 39.0 31.0 39.0 14 37.05587482727669 39.0 36.0 40.0 31.0 41.0 15 37.16483111291542 39.0 35.0 40.0 32.0 41.0 16 37.30565415113243 39.0 36.0 40.0 32.0 41.0 17 37.09779770794769 39.0 35.0 40.0 32.0 41.0 18 36.97514274115154 39.0 35.0 40.0 32.0 41.0 19 36.74274934542055 38.0 35.0 40.0 31.0 41.0 20 36.56801853307162 38.0 35.0 40.0 31.0 41.0 21 36.69796233048906 38.0 35.0 40.0 31.0 41.0 22 36.74289087611223 38.0 35.0 40.0 31.0 41.0 23 36.83857307266856 38.0 35.0 40.0 32.0 41.0 24 36.66251261671626 38.0 35.0 40.0 31.0 41.0 25 36.46911837552562 38.0 35.0 40.0 31.0 41.0 26 36.320459006380055 38.0 35.0 40.0 31.0 41.0 27 36.352791320444105 38.0 35.0 40.0 31.0 41.0 28 36.28249153609219 38.0 35.0 40.0 30.0 41.0 29 36.278774493189765 38.0 35.0 40.0 30.0 41.0 30 36.03443665197975 38.0 35.0 40.0 30.0 41.0 31 36.00830561690621 38.0 35.0 40.0 30.0 41.0 32 35.74178097753014 38.0 35.0 40.0 29.0 41.0 33 35.448834792713406 38.0 34.0 40.0 27.0 41.0 34 35.33953957831303 38.0 34.0 40.0 26.0 41.0 35 35.221089562856385 38.0 34.0 40.0 25.0 41.0 36 35.158726670713946 38.0 34.0 40.0 25.0 41.0 37 35.05960304365477 38.0 34.0 40.0 25.0 41.0 38 34.90958795946263 38.0 34.0 40.0 24.0 41.0 39 34.84877073145296 38.0 34.0 40.0 24.0 41.0 40 34.64510061714831 38.0 34.0 40.0 23.0 41.0 41 34.51775651506743 38.0 34.0 40.0 23.0 41.0 42 34.58810099332199 38.0 34.0 40.0 23.0 41.0 43 34.59660028380628 38.0 34.0 40.0 23.0 41.0 44 34.36542479692208 38.0 34.0 40.0 22.0 41.0 45 34.31254818561378 37.0 33.0 40.0 23.0 41.0 46 34.1479479911953 37.0 33.0 40.0 22.0 41.0 47 34.04522650497406 37.0 33.0 40.0 22.0 41.0 48 34.021482869199566 37.0 33.0 40.0 22.0 41.0 49 33.96368247961772 37.0 33.0 40.0 21.0 41.0 50 33.80319039974972 37.0 33.0 40.0 20.0 41.0 51 32.14204839604757 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 25.0 10 30.0 11 18.0 12 12.0 13 11.0 14 10.0 15 28.0 16 42.0 17 85.0 18 171.0 19 351.0 20 643.0 21 910.0 22 1351.0 23 1900.0 24 2701.0 25 3868.0 26 4818.0 27 5536.0 28 5645.0 29 6061.0 30 7145.0 31 8712.0 32 11544.0 33 15394.0 34 23650.0 35 25005.0 36 24794.0 37 35480.0 38 46442.0 39 36103.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.545693928705774 17.896555962352835 19.414658855165683 17.1430912537757 2 32.407176350966324 30.105812814486782 20.911159695038602 16.575851139508295 3 28.96723564487715 29.316592983802188 28.228668903844795 13.487502467475876 4 26.642035360325966 21.925338835649345 35.073912541481526 16.358713262543155 5 28.85810803261165 26.30496884462537 26.546315918850773 18.290607203912206 6 22.38978297385779 38.29187353115351 27.192887710294123 12.125455784694573 7 60.368799186570975 17.288718886525906 18.450015456641328 3.8924664702617946 8 67.36376739803272 12.287471181744031 15.357569843534097 4.99119157668915 9 62.31447374791894 8.151422942125121 16.131146808296677 13.402956501659261 10 40.033445937138026 22.318645178831478 23.268018160622436 14.379890723408058 11 33.09657979910091 23.116431340854323 27.2614183610001 16.52557049904467 12 28.803358001884593 19.82584275940155 32.10847210169352 19.262327137020332 13 22.48699221208747 26.123213640579085 35.338723914589956 16.0510702327435 14 19.432163967030796 30.768772370229392 30.017542356783977 19.781521305955835 15 16.880514575798998 23.887773610485187 42.30352374177353 16.928188071942284 16 18.16062243708402 24.431921875058197 34.22845288331539 23.17900280454239 17 18.02132644054035 24.38089633621733 33.53532494329461 24.062452279947706 18 19.849307058284573 24.929141541865153 33.79417712938512 21.42737427046515 19 22.445650352150707 26.462887300600013 30.19296592462373 20.89849642262554 20 24.54849847109608 25.787636921632966 33.50329431307334 16.160570294197615 21 21.68920605006462 30.323695589829157 30.72184377246334 17.265254587642882 22 18.991556576894 24.501942322518648 31.91554342198866 24.590957678598695 23 19.61838856134052 29.639878879523863 31.205655268479997 19.536077290655623 24 21.986792951771555 24.175304384099398 31.816099488627263 22.021803175501784 25 18.744622764839306 29.70096054645745 30.425001769133647 21.129414919569598 26 17.819086531119993 26.014830926690824 31.631364691072022 24.53471785111716 27 21.3536293311185 28.614898712443154 29.715486064813607 20.315985891624734 28 16.893922746589297 25.94555537760761 36.760362467550365 20.40015940825273 29 20.492899256218973 23.856860327829775 30.84884894578257 24.80139147016868 30 18.873862633290255 30.454425255034582 31.64067592078751 19.031036190887658 31 22.93281389086494 24.688166916828372 30.28086393313792 22.098155259168767 32 22.055323602477532 28.071867795436006 27.8647860465636 22.008022555522864 33 20.229950129053645 28.375786333349474 27.30313267012548 24.091130867471406 34 18.833265671730732 26.583560837712717 31.41422681410689 23.168946676449664 35 18.235484723996528 27.76161762131601 26.603673093898166 27.399224560789293 36 19.40944456652501 26.884499782117228 29.590343137437475 24.115712513920286 37 17.635096631941988 29.918470872611202 30.785905032905887 21.660527462540923 38 17.7732752809198 30.646609036362214 27.121749915267813 24.45836576745018 39 20.17892459021278 26.334392330526306 29.970241309829305 23.516441769431605 40 19.92491424357432 26.20142797018917 30.20078735758474 23.67287042865177 41 16.836193122353283 26.77797931417206 30.23728737806945 26.148540185405206 42 18.399734816177705 24.657998532550195 31.61199733326381 25.33026931800829 43 21.860160227640943 23.58050302987415 26.853586499461812 27.705750243023097 44 19.82472541183569 25.61742764243388 30.321833343886063 24.23601360184437 45 18.593035945071193 25.82488184049491 28.847307006141687 26.73477520829221 46 23.227421199062917 28.471505774824667 27.242051003191893 21.059022022920523 47 18.324127630887958 23.94066139526915 35.92272424234524 21.812486731497653 48 20.269429743047304 25.729534848208335 28.794046772169107 25.206988636575257 49 18.66864313036094 22.930579195733223 34.239253909785354 24.161523764120478 50 19.33607207636698 24.718707750295167 31.53676259716268 24.40845757617517 51 19.186719951730584 23.898574636955153 28.402602674930073 28.512102736384186 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 312.5 2 539.0 3 3283.5 4 6028.0 5 4130.5 6 2233.0 7 2033.5 8 1834.0 9 1784.5 10 1735.0 11 1699.0 12 1663.0 13 1587.5 14 1512.0 15 1464.5 16 1417.0 17 1307.0 18 1197.0 19 1200.5 20 1204.0 21 1120.0 22 1036.0 23 1125.0 24 1214.0 25 1505.0 26 1841.0 27 1886.0 28 2519.5 29 3153.0 30 3687.0 31 4221.0 32 5027.0 33 5833.0 34 6988.5 35 8144.0 36 8072.0 37 8000.0 38 8406.5 39 8813.0 40 10928.0 41 13043.0 42 14314.5 43 15586.0 44 17367.5 45 19149.0 46 30124.5 47 41100.0 48 32536.5 49 23973.0 50 22354.5 51 20736.0 52 17986.0 53 15236.0 54 13935.0 55 12634.0 56 11296.0 57 9958.0 58 9246.0 59 8534.0 60 8165.5 61 7797.0 62 6955.5 63 6114.0 64 5226.5 65 4339.0 66 3375.5 67 2412.0 68 2044.5 69 1677.0 70 1472.0 71 1267.0 72 905.5 73 544.0 74 436.0 75 299.0 76 270.0 77 188.0 78 106.0 79 95.0 80 84.0 81 56.5 82 29.0 83 19.5 84 10.0 85 8.5 86 7.0 87 7.0 88 7.0 89 6.5 90 6.0 91 4.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 268493.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.000487908437094 #Duplication Level Percentage of deduplicated Percentage of total 1 76.96379395964065 25.39842751952565 2 8.567333303236873 5.654523581620378 3 3.2921764254435466 3.2593028496087424 4 1.8610897927858787 2.456674848133843 5 1.3159676764028712 2.1713787696513505 6 0.9107940950747144 1.803398971295341 7 0.6557266037650671 1.514750850115273 8 0.5360931786375334 1.4153069167538819 9 0.4029163468917882 1.196679243034269 >10 5.218726016884114 39.05837396133233 >50 0.21895174032775044 4.467155568301594 >100 0.04514468872737122 2.9538945149407994 >500 0.004514468872737122 1.0104546487245478 >1k 0.004514468872737122 3.7706755855832363 >5k 0.002257234436368561 3.8690021713787695 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC 5282 1.9672766142878957 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG 5106 1.9017255570908738 No Hit GAATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC 4269 1.5899855862164005 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3403 1.2674445888719632 No Hit GCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 1434 0.5340921364802808 TruSeq Adapter, Index 22 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCT 1018 0.3791532740145926 No Hit GAACTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 802 0.298704249272793 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTC 770 0.2867858752369708 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATCATCCTCGTA 628 0.23389809045300994 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC 513 0.19106643376177404 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG 490 0.18250010242352688 No Hit GAATCTATCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC 436 0.16238784623807698 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 433 0.16127049867221863 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 371 0.1381786489778132 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 310 0.11545924847202721 No Hit AGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCAAGGAAGG 298 0.11098985820859389 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 283 0.10540312037930226 No Hit GAATGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTT 281 0.10465822200206337 No Hit CCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 273 0.10167862849310783 TruSeq Adapter, Index 22 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11508679928340776 0.0 2 0.0 0.0 0.0 0.9910872909163367 0.0 3 0.0 0.0 0.0 1.2119496597676662 0.0 4 0.0 0.0 0.0 1.8171795912742603 0.0 5 3.724491886194426E-4 0.0 0.0 4.255604429165751 0.0 6 3.724491886194426E-4 0.0 0.0 4.801242490493235 0.0 7 3.724491886194426E-4 0.0 0.0 5.591207219555073 0.0 8 3.724491886194426E-4 0.0 0.0 6.60166186827962 0.0 9 3.724491886194426E-4 0.0 0.0 6.8731773267831935 0.0 10 3.724491886194426E-4 0.0 0.0 9.671760530069685 0.0 11 3.724491886194426E-4 0.0 0.0 10.533235503346456 0.0 12 7.448983772388852E-4 0.0 0.0 13.500910638266175 0.0 13 7.448983772388852E-4 0.0 0.0 13.920288424651666 0.0 14 7.448983772388852E-4 0.0 0.0 14.10576812058415 0.0 15 7.448983772388852E-4 0.0 0.0 14.638742909498571 0.0 16 7.448983772388852E-4 0.0 0.0 15.185870767580532 0.0 17 7.448983772388852E-4 0.0 0.0 15.74230985537798 0.0 18 7.448983772388852E-4 0.0 0.0 16.405641860309206 0.0 19 7.448983772388852E-4 0.0 0.0 16.85109108989806 0.0 20 7.448983772388852E-4 0.0 0.0 17.215346396367874 0.0 21 7.448983772388852E-4 0.0 0.0 17.642545615714376 0.0 22 7.448983772388852E-4 0.0 0.0 18.085015251794275 0.0 23 7.448983772388852E-4 0.0 0.0 18.529347133817268 0.0 24 7.448983772388852E-4 0.0 0.0 18.91036265377496 0.0 25 7.448983772388852E-4 0.0 0.0 19.227316913290103 0.0 26 7.448983772388852E-4 0.0 0.0 19.526766060940137 0.0 27 7.448983772388852E-4 0.0 0.0 19.856011143679723 0.0 28 7.448983772388852E-4 0.0 0.0 20.18674602317379 0.0 29 7.448983772388852E-4 0.0 0.0 20.501465587557217 0.0 30 7.448983772388852E-4 0.0 0.0 20.85491986755707 0.0 31 7.448983772388852E-4 0.0 0.0 21.197573121086954 0.0 32 7.448983772388852E-4 0.0 0.0 21.55512434216162 0.0 33 7.448983772388852E-4 0.0 0.0 21.900012290823224 0.0 34 7.448983772388852E-4 0.0 0.0 22.25756351189789 0.0 35 7.448983772388852E-4 0.0 0.0 22.61809432648151 0.0 36 7.448983772388852E-4 0.0 0.0 22.974528199990317 0.0 37 7.448983772388852E-4 0.0 0.0 23.309732469747814 0.0 38 7.448983772388852E-4 0.0 0.0 23.66132450380457 0.0 39 7.448983772388852E-4 0.0 0.0 24.02222776757681 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGA 25 3.882793E-5 45.000004 13 CGGGTTG 25 3.882793E-5 45.000004 6 AGCGTGA 25 3.882793E-5 45.000004 28 TCGTTTC 25 3.882793E-5 45.000004 43 ACTATGC 55 1.8189894E-12 45.000004 8 GGCACCG 25 3.882793E-5 45.000004 8 TAGCGAG 25 3.882793E-5 45.000004 1 GCACGTC 25 3.882793E-5 45.000004 39 TACATGC 25 3.882793E-5 45.000004 15 ACGGCCT 25 3.882793E-5 45.000004 8 TCTGTCG 25 3.882793E-5 45.000004 24 CTCGATA 25 3.882793E-5 45.000004 1 GCGGAGT 25 3.882793E-5 45.000004 9 CACGTCA 25 3.882793E-5 45.000004 40 CACAACG 25 3.882793E-5 45.000004 12 TAGTGAG 25 3.882793E-5 45.000004 1 TCGACAT 25 3.882793E-5 45.000004 13 CGTTTCG 25 3.882793E-5 45.000004 44 GACCTAT 25 3.882793E-5 45.000004 33 CGATAGC 25 3.882793E-5 45.000004 10 >>END_MODULE