##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936684.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 377673 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13944867650057 31.0 31.0 33.0 28.0 34.0 2 31.197056713082482 31.0 31.0 34.0 28.0 34.0 3 30.989821882951652 31.0 31.0 34.0 28.0 34.0 4 34.973469112168466 35.0 35.0 37.0 32.0 37.0 5 35.202677978039205 35.0 35.0 37.0 33.0 37.0 6 35.18101902968971 36.0 35.0 37.0 32.0 37.0 7 30.91284788692864 35.0 35.0 37.0 0.0 37.0 8 32.978253674475006 35.0 35.0 37.0 17.0 37.0 9 36.22151967442735 39.0 35.0 39.0 32.0 39.0 10 36.127930776094665 37.0 35.0 39.0 32.0 39.0 11 36.39658381721754 38.0 35.0 39.0 32.0 39.0 12 36.37892038880195 38.0 35.0 39.0 32.0 39.0 13 36.22835892425458 38.0 35.0 39.0 32.0 39.0 14 37.20129847778369 39.0 36.0 40.0 32.0 41.0 15 37.366425452706444 39.0 36.0 41.0 32.0 41.0 16 37.382632594863814 39.0 36.0 40.0 32.0 41.0 17 37.287134637636264 39.0 36.0 40.0 32.0 41.0 18 37.206652315627544 39.0 36.0 40.0 32.0 41.0 19 36.98008859516036 39.0 35.0 40.0 32.0 41.0 20 36.967953758939615 39.0 35.0 40.0 32.0 41.0 21 36.95125147945445 39.0 35.0 40.0 31.0 41.0 22 37.04647936177593 39.0 35.0 40.0 32.0 41.0 23 37.13484416413141 39.0 35.0 40.0 32.0 41.0 24 37.071990849226715 39.0 35.0 40.0 32.0 41.0 25 36.794684819936826 38.0 35.0 40.0 31.0 41.0 26 36.73886933934912 39.0 35.0 40.0 31.0 41.0 27 36.77032512252663 39.0 35.0 40.0 31.0 41.0 28 36.7406009960998 39.0 35.0 40.0 31.0 41.0 29 36.71631278910592 39.0 35.0 40.0 31.0 41.0 30 36.51660298724028 38.0 35.0 40.0 31.0 41.0 31 36.52179530969913 39.0 35.0 40.0 31.0 41.0 32 36.31175911436613 38.0 35.0 40.0 30.0 41.0 33 36.14419881749556 38.0 35.0 40.0 30.0 41.0 34 35.995204846520664 38.0 35.0 40.0 29.0 41.0 35 35.91025040180262 38.0 35.0 40.0 29.0 41.0 36 35.82807613994117 38.0 35.0 40.0 29.0 41.0 37 35.77573191623441 38.0 35.0 40.0 29.0 41.0 38 35.60719723146743 38.0 35.0 40.0 28.0 41.0 39 35.54216213496861 38.0 35.0 40.0 27.0 41.0 40 35.35791809316525 38.0 34.0 40.0 26.0 41.0 41 35.166029872402845 38.0 34.0 40.0 26.0 41.0 42 35.16613313633752 38.0 34.0 40.0 26.0 41.0 43 35.07018770205972 38.0 34.0 40.0 25.0 41.0 44 34.88634877261546 38.0 34.0 40.0 24.0 41.0 45 34.824088563386844 37.0 34.0 40.0 24.0 41.0 46 34.67314581661914 37.0 34.0 40.0 24.0 41.0 47 34.602971353525405 37.0 34.0 40.0 24.0 41.0 48 34.520622337312965 37.0 34.0 40.0 24.0 41.0 49 34.41572736203012 37.0 33.0 40.0 24.0 41.0 50 34.26077056077612 37.0 33.0 40.0 23.0 41.0 51 32.44429969841635 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 13.0 9 26.0 10 42.0 11 33.0 12 25.0 13 17.0 14 22.0 15 29.0 16 47.0 17 137.0 18 218.0 19 373.0 20 634.0 21 975.0 22 1538.0 23 2054.0 24 2988.0 25 4054.0 26 5323.0 27 5927.0 28 6726.0 29 7501.0 30 9152.0 31 11436.0 32 15175.0 33 20779.0 34 31994.0 35 34297.0 36 37799.0 37 54454.0 38 70024.0 39 53857.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.1277348393981 19.10753482510002 20.879173253052244 13.885557082449631 2 31.995668210330102 25.944931197093783 23.47003889608206 18.58936169649406 3 32.01949834910094 25.397102784684105 26.718881148506778 15.864517717708177 4 27.34667291545861 24.208508418658468 28.750532868380844 19.694285797502072 5 26.309797099607334 28.969240586433237 25.39816190196281 19.32280041199662 6 25.039385923801806 34.49439065011266 26.63018007641531 13.836043349670218 7 66.70029364026551 17.56890219846269 11.67782711499101 4.052977046280777 8 75.75495203522624 7.797750964458672 11.096106949662804 5.351190050652284 9 70.96562370092646 6.976140735503994 13.299865227326285 8.758370336243258 10 40.97168714734704 25.589862129408246 19.380257524366318 14.058193198878394 11 32.6801227516926 24.807704019085293 23.900305290555586 18.611867938666517 12 27.778527985850193 23.483013082746183 28.738882578315106 19.999576353088518 13 24.54001212689284 26.123392458555415 31.8079396726798 17.528655741871937 14 20.657552962483418 29.635954913377443 29.5128325297281 20.193659594411038 15 18.472329237197258 24.90832016056218 36.983316255067216 19.636034347173347 16 21.12594757899029 26.239630579893188 31.892669054976132 20.741752786140392 17 22.18665353361241 24.404974673858074 29.736571054854334 23.671800737675184 18 24.982987928710816 23.792275328127772 30.32676415841217 20.89797258474924 19 24.112393525616074 26.769453998564895 27.39989355871349 21.718258917105537 20 27.026025159330956 25.218376743902795 28.755828454774367 18.999769641991882 21 24.525714043630337 27.075274112790694 29.23216645087152 19.166845392707447 22 23.83013877084144 23.046127205280758 29.89861599849605 23.225118025381747 23 21.8776560675505 27.244203318743992 28.82361196061143 22.05452865309408 24 22.35293494636895 23.591307824493676 30.51502225470182 23.540734974435555 25 22.235637707752474 27.921508818475242 28.02530231178824 21.817551161984046 26 21.510407151159868 25.26127099369031 29.542223034212135 23.68609882093769 27 21.97191750535516 27.01993523497841 29.47496908701443 21.533178172652004 28 18.52607943909149 26.55445319098797 31.068940591464045 23.850526778456498 29 20.642195761942208 24.585554169877117 31.39011790623105 23.382132161949624 30 20.014933553629728 24.77487138344547 32.66635422706945 22.543840835855356 31 23.241799122521336 24.027399364000075 28.05839972674774 24.67240178673085 32 23.37048187188388 26.033897048504922 28.665803486084524 21.929817593526675 33 22.680731744127858 25.1222618508604 26.001064412865098 26.195941992146643 34 20.639018410106097 24.816176957314926 30.52826122068562 24.016543411893355 35 19.36542988246446 26.366724653337677 30.247330362509366 24.020515101688495 36 22.029639397044534 26.534065183372917 28.515673611828223 22.920621807754326 37 20.78094012545244 26.99954722736335 28.678248114109294 23.54126453307491 38 20.070272431442014 28.507730232237943 25.628519910080943 25.793477426239104 39 21.463541211577212 25.081221056310614 27.21799016609607 26.2372475660161 40 23.369422754605175 22.412510293296055 30.548914007620347 23.669152944478427 41 19.74671210279792 25.531345899759845 28.58954704201783 26.132394955424402 42 21.706343847720117 24.052023840729944 31.28129360584421 22.96033870570573 43 22.73898319445658 25.275569076952813 27.48250470645241 24.502943022138197 44 21.322413834189895 24.477788986768978 28.986716021531855 25.213081157509276 45 21.333005006976936 23.868002213555112 27.339788653147036 27.45920412632092 46 22.61612559012691 25.156947941737958 27.661230747233716 24.565695720901417 47 19.62835574690274 25.662941221638825 31.38032107140304 23.328381960055392 48 21.509083254561485 25.350501624421128 28.539768529918742 24.60064659109865 49 21.842705197353265 23.376836575556105 31.45392972227297 23.32652850481766 50 20.7703489526654 25.01264321251453 29.651047334598978 24.56596050022109 51 20.30460212935529 24.53206874730256 27.925215728950707 27.238113394391444 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 135.0 1 390.0 2 645.0 3 2020.0 4 3395.0 5 2457.0 6 1519.0 7 1424.5 8 1330.0 9 1318.0 10 1306.0 11 1300.5 12 1295.0 13 1297.5 14 1300.0 15 1259.0 16 1218.0 17 1308.5 18 1399.0 19 1270.5 20 1142.0 21 1262.0 22 1382.0 23 1556.5 24 1731.0 25 1871.5 26 2505.5 27 2999.0 28 3502.0 29 4005.0 30 4505.5 31 5006.0 32 5897.0 33 6788.0 34 8094.5 35 9401.0 36 10467.5 37 11534.0 38 12612.5 39 13691.0 40 15675.0 41 17659.0 42 19740.0 43 21821.0 44 24007.5 45 26194.0 46 32915.5 47 39637.0 48 36708.5 49 33780.0 50 33779.5 51 33779.0 52 30218.5 53 26658.0 54 24303.5 55 21949.0 56 19756.5 57 17564.0 58 16507.0 59 15450.0 60 14455.5 61 13461.0 62 12402.0 63 11343.0 64 9857.0 65 8371.0 66 7111.0 67 5851.0 68 5100.0 69 4349.0 70 3354.5 71 2360.0 72 2067.0 73 1774.0 74 1431.0 75 905.0 76 722.0 77 496.0 78 270.0 79 218.5 80 167.0 81 125.0 82 83.0 83 73.0 84 63.0 85 39.5 86 16.0 87 12.0 88 8.0 89 8.0 90 8.0 91 6.5 92 5.0 93 5.5 94 6.0 95 4.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 377673.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.92756258052904 #Duplication Level Percentage of deduplicated Percentage of total 1 75.11174440264264 25.483584087533607 2 8.852215593062335 6.006681970199148 3 3.5948916324700297 3.6589773249254143 4 2.0626788763555735 2.7992666664435615 5 1.3937109056980064 2.364260698611746 6 1.0014366102708672 2.038578195923863 7 0.7252843082664752 1.7224990130170588 8 0.5787640774392573 1.570884356534605 9 0.4860538029379379 1.4841558735012916 >10 6.021077774450316 44.807980840560354 >50 0.13553262830202467 2.8673255892737175 >100 0.030378002895281395 1.9056483708988734 >500 0.0023367694534831844 0.5134759096736252 >1k 0.0038946157558053065 2.776681102903129 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGC 2671 0.7072255628546388 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCG 2568 0.6799532929280092 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTC 2131 0.5642447302295901 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1748 0.462834250793676 No Hit GCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 1389 0.36777847502998623 TruSeq Adapter, Index 13 (95% over 21bp) ATGAATGATACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGC 754 0.1996436070357161 No Hit CCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 638 0.16892920595329822 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCT 551 0.14589340514148483 No Hit GAACTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCT 417 0.11041297630489867 TruSeq Adapter, Index 16 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTT 408 0.10802996242781453 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11941547317388322 0.0 2 0.0 0.0 0.0 0.9463212885220813 0.0 3 0.0 0.0 0.0 1.1769440759598913 0.0 4 0.0 0.0 0.0 1.618066422540134 0.0 5 2.64779319676016E-4 0.0 0.0 3.0497282040283524 0.0 6 2.64779319676016E-4 0.0 0.0 3.665604901594766 0.0 7 2.64779319676016E-4 0.0 0.0 4.388982002949642 0.0 8 2.64779319676016E-4 0.0 0.0 5.385081803570814 0.0 9 2.64779319676016E-4 0.0 0.0 5.692755373034345 0.0 10 2.64779319676016E-4 0.0 0.0 7.140303913703124 0.0 11 2.64779319676016E-4 0.0 0.0 8.02784419325713 0.0 12 2.64779319676016E-4 0.0 0.0 9.821988863381815 0.0 13 2.64779319676016E-4 0.0 0.0 10.197710718002082 0.0 14 2.64779319676016E-4 0.0 0.0 10.452428423530408 0.0 15 2.64779319676016E-4 0.0 0.0 10.827620719511323 0.0 16 2.64779319676016E-4 0.0 0.0 11.381274276953873 0.0 17 2.64779319676016E-4 0.0 0.0 12.001387443635103 0.0 18 2.64779319676016E-4 0.0 0.0 12.694844481866589 0.0 19 2.64779319676016E-4 0.0 0.0 13.076126702200051 0.0 20 2.64779319676016E-4 0.0 0.0 13.43649135627911 0.0 21 2.64779319676016E-4 0.0 0.0 13.903562076187601 0.0 22 2.64779319676016E-4 0.0 0.0 14.34494920208752 0.0 23 2.64779319676016E-4 0.0 0.0 14.794014928258044 0.0 24 2.64779319676016E-4 0.0 0.0 15.1930373630098 0.0 25 2.64779319676016E-4 0.0 0.0 15.503623504989767 0.0 26 2.64779319676016E-4 0.0 0.0 15.832744199347054 0.0 27 2.64779319676016E-4 0.0 0.0 16.179340328802958 0.0 28 2.64779319676016E-4 0.0 0.0 16.511903154316034 0.0 29 2.64779319676016E-4 0.0 0.0 16.8677665599606 0.0 30 2.64779319676016E-4 0.0 0.0 17.31497883089339 0.0 31 2.64779319676016E-4 0.0 0.0 17.681698188644674 0.0 32 2.64779319676016E-4 0.0 0.0 18.019821379870947 0.0 33 2.64779319676016E-4 0.0 0.0 18.369594861162962 0.0 34 2.64779319676016E-4 0.0 0.0 18.731018632520726 0.0 35 2.64779319676016E-4 0.0 0.0 19.146722164412072 0.0 36 2.64779319676016E-4 0.0 0.0 19.483521459039963 0.0 37 2.64779319676016E-4 0.0 0.0 19.855536403184765 0.0 38 2.64779319676016E-4 0.0 0.0 20.22331487821475 0.0 39 2.64779319676016E-4 0.0 0.0 20.761876014435767 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAACC 20 7.0272654E-4 45.0 14 GGCGTAC 20 7.0272654E-4 45.0 8 TTACTCC 25 3.8858154E-5 45.0 32 ATACTCG 20 7.0272654E-4 45.0 44 TAGCACG 25 3.8858154E-5 45.0 1 TCGTCAG 20 7.0272654E-4 45.0 1 TACTCGC 20 7.0272654E-4 45.0 45 TGCGTTG 25 3.8858154E-5 45.0 1 CCCGACG 20 7.0272654E-4 45.0 10 CTAAACG 30 2.1616179E-6 44.999996 45 CGACAGG 60 3.6379788E-12 41.249996 2 AATGCGG 55 6.002665E-11 40.909092 2 CGAATAT 55 6.002665E-11 40.909092 14 ACAACGA 215 0.0 40.813953 13 CGTTTTT 1120 0.0 40.78125 1 CGTACGG 50 1.0768417E-9 40.5 31 TGGGCGA 150 0.0 40.5 6 ATGGGCG 80 0.0 39.375 5 TACGGGT 40 3.4500044E-7 39.375 4 GGGCGAT 455 0.0 39.065937 7 >>END_MODULE