SRR2936682.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936682.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	448291
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1093	0.24381484348336238	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	553	0.12335737277795004	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AATGCGC	20	7.0286775E-4	45.0	18
TATAGCG	20	7.0286775E-4	45.0	1
CGATGCA	20	7.0286775E-4	45.0	10
ATAACGG	20	7.0286775E-4	45.0	2
ACGGGTA	30	2.1625274E-6	44.999996	5
CGAATAT	115	0.0	43.04348	14
TACGGGA	60	3.6379788E-12	41.249996	4
TACGAAT	120	0.0	41.249996	12
CGTTTTT	480	0.0	40.781246	1
GTCGTTT	40	3.4519326E-7	39.375	9
TATTGGG	145	0.0	38.793102	3
CGCGGTA	35	6.2397667E-6	38.571426	30
TAACGCC	35	6.2397667E-6	38.571426	12
ATCACGG	35	6.2397667E-6	38.571426	2
ATAACGC	35	6.2397667E-6	38.571426	11
TTTAGCG	30	1.1388113E-4	37.499996	1
GCGCGAC	60	1.546141E-10	37.499996	9
CGATTGA	30	1.1388113E-4	37.499996	10
GTACGAG	30	1.1388113E-4	37.499996	1
AAGCTAC	145	0.0	37.24138	8