SRR2936679.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936679.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	278089
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG	8944	3.2162365285933645	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC	8077	2.9044658364768114	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC	7535	2.709564204265541	No Hit
GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	2383	0.8569199069362685	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2278	0.8191622106591775	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTT	1897	0.6821557127394468	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCT	1665	0.5987291838224453	No Hit
GAACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT	1460	0.5250117768052673	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTC	1316	0.47322979333954235	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG	1059	0.38081333673751927	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC	1038	0.37326179748210103	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTA	978	0.351685971038049	No Hit
GAATCTATCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC	894	0.32147981401637604	No Hit
CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	438	0.1575035330415802	No Hit
CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT	427	0.15354796486017067	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTGGTCAT	417	0.149951993786162	No Hit
TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	307	0.1103963119720665	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATG	291	0.10464275825365262	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGCACG	20	7.0240523E-4	45.000004	1
CGGCGAA	20	7.0240523E-4	45.000004	31
ACCGGTG	20	7.0240523E-4	45.000004	17
CATATCC	20	7.0240523E-4	45.000004	34
GTATTAC	20	7.0240523E-4	45.000004	38
CTCCGGG	20	7.0240523E-4	45.000004	3
CCGATAG	20	7.0240523E-4	45.000004	40
CGGTTTT	40	6.7830115E-9	45.000004	1
AGGCGTA	20	7.0240523E-4	45.000004	6
CACGACC	35	1.2074815E-7	45.000004	27
TATTGTC	20	7.0240523E-4	45.000004	19
AGGCCGG	20	7.0240523E-4	45.000004	2
GTACTGG	20	7.0240523E-4	45.000004	2
AAACACG	35	1.2074815E-7	45.000004	40
AGACACG	35	1.2074815E-7	45.000004	24
GTATAAC	20	7.0240523E-4	45.000004	11
CCGGTGA	20	7.0240523E-4	45.000004	18
ACCCGTC	20	7.0240523E-4	45.000004	17
ACCCGGA	20	7.0240523E-4	45.000004	14
CACCGGT	20	7.0240523E-4	45.000004	16