##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936679.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 278089 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.979024700725308 31.0 30.0 33.0 28.0 34.0 2 31.02366508563805 31.0 31.0 33.0 28.0 34.0 3 30.73088831273441 31.0 30.0 34.0 27.0 34.0 4 34.70904278845981 35.0 35.0 37.0 32.0 37.0 5 34.939195725109585 35.0 35.0 37.0 32.0 37.0 6 34.90793594856323 35.0 35.0 37.0 32.0 37.0 7 30.90553024391472 35.0 35.0 37.0 0.0 37.0 8 32.783860562625634 35.0 33.0 37.0 17.0 37.0 9 35.71907914372737 37.0 34.0 39.0 31.0 39.0 10 35.77289285084991 37.0 35.0 39.0 32.0 39.0 11 36.09425399782084 37.0 35.0 39.0 32.0 39.0 12 36.248700955449515 37.0 35.0 39.0 32.0 39.0 13 35.97573438719259 37.0 35.0 39.0 31.0 39.0 14 37.14867182808381 39.0 36.0 40.0 32.0 41.0 15 37.110187745649775 39.0 36.0 40.0 32.0 41.0 16 37.343429621452124 39.0 36.0 40.0 32.0 41.0 17 37.01074116559806 39.0 35.0 40.0 31.0 41.0 18 36.87754999298786 38.0 35.0 40.0 31.0 41.0 19 36.650147974209695 38.0 35.0 40.0 31.0 41.0 20 36.45672788208092 38.0 35.0 40.0 30.0 41.0 21 36.73425414165968 38.0 35.0 40.0 31.0 41.0 22 36.80001726066116 38.0 35.0 40.0 31.0 41.0 23 36.92705572676373 38.0 35.0 40.0 32.0 41.0 24 36.76054428618176 38.0 35.0 40.0 31.0 41.0 25 36.653082286606086 38.0 35.0 40.0 31.0 41.0 26 36.4892570364164 38.0 35.0 40.0 31.0 41.0 27 36.54446238434458 38.0 35.0 40.0 31.0 41.0 28 36.45725289385772 38.0 35.0 40.0 31.0 41.0 29 36.36277594583029 38.0 35.0 40.0 30.0 41.0 30 36.20811682590825 38.0 35.0 40.0 30.0 41.0 31 36.16687463366045 38.0 35.0 40.0 30.0 41.0 32 35.891707331106225 38.0 35.0 40.0 29.0 41.0 33 35.63665229476894 38.0 35.0 40.0 27.0 41.0 34 35.43548648094675 38.0 35.0 40.0 27.0 41.0 35 35.260283578278894 38.0 35.0 40.0 25.0 41.0 36 35.29886834790301 38.0 35.0 40.0 25.0 41.0 37 35.127987802466116 38.0 34.0 40.0 25.0 41.0 38 35.11095368748854 38.0 34.0 40.0 25.0 41.0 39 34.93260790610201 38.0 34.0 40.0 24.0 41.0 40 34.854039534105986 38.0 34.0 40.0 24.0 41.0 41 34.563121878247614 38.0 33.0 40.0 23.0 41.0 42 34.79857527626048 38.0 34.0 40.0 24.0 41.0 43 34.83950821499592 38.0 34.0 40.0 24.0 41.0 44 34.71673097461604 38.0 34.0 40.0 23.0 41.0 45 34.673464250653566 38.0 34.0 40.0 23.0 41.0 46 34.55651607938466 38.0 34.0 40.0 23.0 41.0 47 34.38459989427845 38.0 33.0 40.0 23.0 41.0 48 34.31602112992603 38.0 33.0 40.0 22.0 41.0 49 34.23789506237212 37.0 33.0 40.0 22.0 41.0 50 34.025056726443694 37.0 33.0 40.0 20.0 41.0 51 32.193639446364294 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 19.0 10 21.0 11 18.0 12 3.0 13 6.0 14 9.0 15 15.0 16 33.0 17 71.0 18 170.0 19 397.0 20 701.0 21 1131.0 22 1572.0 23 2017.0 24 2763.0 25 3820.0 26 4753.0 27 5093.0 28 5421.0 29 5831.0 30 7255.0 31 9047.0 32 11770.0 33 15778.0 34 22661.0 35 25522.0 36 27983.0 37 38736.0 38 48853.0 39 36604.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.95479145165756 17.345166475480873 20.90194146478286 13.798100608078709 2 30.213348963820934 33.383916659774385 22.191097094814968 14.211637281589706 3 25.03443142303363 33.603990089503725 28.549852744984523 12.811725742478128 4 24.199087342541418 19.704842694245368 40.55068701027369 15.545382952939526 5 31.547454232278156 23.265573251728764 27.090607683151795 18.096364832841285 6 20.38915598962922 38.2740777233188 28.53510926358108 12.801657023470902 7 58.35326100636846 16.10239887230347 21.907734574183085 3.636605547144979 8 66.79983746210746 12.703487013150466 14.802455329049332 5.694220195692746 9 62.0103635886353 5.518377210173721 15.397588541797768 17.073670659393215 10 36.63719169043004 22.626209594770017 24.28862702228423 16.447971692515708 11 28.116538230566473 23.17315679512674 30.77360125715149 17.9367037171553 12 25.39906288993811 18.76989021500311 34.15848882911586 21.67255806594292 13 20.405337859462257 24.082577879743535 40.79988780570249 14.712196455091714 14 18.947531186059138 30.1162577448227 30.27268248654208 20.66352858257608 15 14.22997673406715 24.8963461337917 44.91080193750921 15.962875194631934 16 17.308487570525983 24.720503148272673 32.24687060617285 25.724138675028495 17 17.74791523576984 24.707557652406244 34.78886255838958 22.755664553434332 18 17.60012082462809 25.08657300360676 35.211748756693 22.101557415072154 19 18.05393237416798 28.655574294560378 30.4877215567678 22.802771774503846 20 19.870257363649767 26.476775420818516 37.17442976888694 16.47853744664478 21 19.27872012197534 31.74091747605982 32.04621542024316 16.93414698172168 22 16.212075990060736 22.894469036891067 34.682421814598925 26.211033158449276 23 17.09704447137427 30.089287961767635 32.44285102970632 20.370816537151775 24 20.88144442966101 23.04873619596604 31.25546138106865 24.814357993304302 25 16.48321220904099 33.887712207243005 28.899021536270762 20.730054047445243 26 15.681310659537054 25.6845829932144 33.19297059574453 25.441135751504014 27 20.071991340901654 27.482928127326144 29.859865007245883 22.58521552452632 28 15.269571971563062 24.228933902455687 39.19500591537242 21.306488210608833 29 21.206520214751393 20.450647094994768 31.384556742625563 26.95827594762828 30 17.901103603522614 26.983088148038938 36.36030191773138 18.755506330707075 31 20.66676495654269 22.248632631999108 33.57594151512645 23.50866089633175 32 26.101715637799412 26.01145676384179 28.67894810654143 19.207879491817366 33 22.322350039016285 23.776560741345396 28.795817166446714 25.1052720531916 34 21.129566433767607 22.213032518366422 33.095879376746296 23.561521671119678 35 17.92879258079248 22.816076867477676 31.79413784795515 27.46099270377469 36 18.736807281122232 26.062519553092717 32.07750036858704 23.12317279719802 37 19.83070168183567 24.091927404535955 37.13847005814685 18.93890085548152 38 21.54993545231922 24.984087827997513 29.88827317873055 23.577703540952715 39 24.715109191661664 23.205520534792818 32.84739777553229 19.231972498013224 40 23.513695255835362 21.400343055640462 31.292859480238338 23.793102208285838 41 15.987327797935194 29.41612217671321 31.678347579372073 22.918202445979524 42 18.01149991549468 23.176033571985947 34.223575905555414 24.588890606963957 43 22.086454336561317 26.734966143932336 27.636476092186314 23.54210342732003 44 21.646307477102656 23.194373024463392 31.667559666150048 23.49175983228391 45 18.544422828662764 22.263016516295142 30.148261887381377 29.044298767660713 46 25.727375048995103 25.910409976662148 27.400939986838747 20.961274987504 47 16.408775607809012 22.18822031795576 39.762809747958386 21.64019432627684 48 20.84620391313572 24.046258571896047 30.02204330268367 25.085494212284555 49 18.20640154770595 20.1316844607302 37.33301209325072 24.32890189831313 50 20.797658303636606 20.997594295351487 32.932981887093696 25.271765513918204 51 19.833218861587476 21.535551568023187 28.774960534217463 29.856269036171874 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 71.0 1 199.5 2 328.0 3 2326.0 4 4324.0 5 3132.0 6 1940.0 7 1822.5 8 1705.0 9 1703.5 10 1702.0 11 1633.5 12 1565.0 13 1522.0 14 1479.0 15 1393.5 16 1308.0 17 1265.0 18 1222.0 19 1198.5 20 1175.0 21 1194.0 22 1213.0 23 1380.5 24 1548.0 25 1682.5 26 2195.5 27 2574.0 28 2939.5 29 3305.0 30 3639.0 31 3973.0 32 5068.5 33 6164.0 34 6826.5 35 7489.0 36 8167.5 37 8846.0 38 9721.0 39 10596.0 40 11997.0 41 13398.0 42 14646.5 43 15895.0 44 18836.5 45 21778.0 46 39692.5 47 57607.0 48 41937.5 49 26268.0 50 25286.5 51 24305.0 52 19618.0 53 14931.0 54 12950.5 55 10970.0 56 9237.0 57 7504.0 58 6866.0 59 6228.0 60 5663.0 61 5098.0 62 4584.0 63 4070.0 64 3236.5 65 2403.0 66 1822.5 67 1242.0 68 1064.0 69 886.0 70 710.5 71 535.0 72 402.0 73 269.0 74 237.5 75 150.0 76 94.0 77 62.5 78 31.0 79 20.0 80 9.0 81 7.5 82 6.0 83 6.0 84 6.0 85 5.5 86 5.0 87 2.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 278089.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.0076646487908 #Duplication Level Percentage of deduplicated Percentage of total 1 78.89810311044583 29.198345413370973 2 8.704214647921859 6.442453134427698 3 3.0939359511757214 3.4349803237784604 4 1.6629599960157222 2.4616906342761733 5 1.0972559619751536 2.030344033733142 6 0.7464903845487207 1.6575519488955568 7 0.5606170525690697 1.452298951450876 8 0.4816709624292377 1.4260413958913234 9 0.33377199369902155 1.1116909810774533 >10 4.333040012761588 33.129204839366324 >50 0.050965184651848426 1.142386373770176 >100 0.023983616306752203 1.8960877106894443 >500 0.0019986346922293502 0.6923105508895337 >1k 0.007994538768917401 4.843215264128918 >5k 0.0029979520383440253 9.081398444253947 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG 8944 3.2162365285933645 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC 8077 2.9044658364768114 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC 7535 2.709564204265541 No Hit GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 2383 0.8569199069362685 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2278 0.8191622106591775 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTT 1897 0.6821557127394468 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCT 1665 0.5987291838224453 No Hit GAACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCT 1460 0.5250117768052673 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTC 1316 0.47322979333954235 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCG 1059 0.38081333673751927 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGC 1038 0.37326179748210103 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTA 978 0.351685971038049 No Hit GAATCTATCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTC 894 0.32147981401637604 No Hit CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 438 0.1575035330415802 No Hit CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT 427 0.15354796486017067 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTGGTCAT 417 0.149951993786162 No Hit TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 307 0.1103963119720665 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATG 291 0.10464275825365262 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1765621797338262 0.0 2 0.0 0.0 0.0 1.577912107275009 0.0 3 0.0 0.0 0.0 1.8576786568328845 0.0 4 0.0 0.0 0.0 2.7415683468242182 0.0 5 0.0 0.0 0.0 6.418808367105495 0.0 6 0.0 0.0 0.0 7.72126909011144 0.0 7 0.0 0.0 0.0 8.824872612724704 0.0 8 0.0 0.0 0.0 10.239168036132318 0.0 9 0.0 0.0 0.0 10.536195246845434 0.0 10 0.0 0.0 0.0 15.046981362081924 0.0 11 0.0 0.0 0.0 16.23149423386038 0.0 12 0.0 0.0 0.0 20.57219091729626 0.0 13 0.0 0.0 0.0 21.148265483352453 0.0 14 0.0 0.0 0.0 21.428032032910327 0.0 15 0.0 0.0 0.0 22.12924639234202 0.0 16 0.0 0.0 0.0 22.864982074084196 0.0 17 0.0 0.0 0.0 23.7362858653165 0.0 18 0.0 0.0 0.0 24.66045043133673 0.0 19 0.0 0.0 0.0 25.354113251513006 0.0 20 0.0 0.0 0.0 25.88164220807008 0.0 21 0.0 0.0 0.0 26.50806036916239 0.0 22 0.0 0.0 0.0 27.2161070736347 0.0 23 0.0 0.0 0.0 27.938537662403043 0.0 24 0.0 0.0 0.0 28.455997899952894 0.0 25 0.0 0.0 0.0 28.932464067259044 0.0 26 0.0 0.0 0.0 29.388433199443345 0.0 27 0.0 0.0 0.0 29.873170100219713 0.0 28 0.0 0.0 0.0 30.31511494521538 0.0 29 0.0 0.0 0.0 30.777197228225496 0.0 30 0.0 0.0 0.0 31.307243364534376 0.0 31 0.0 0.0 0.0 31.824703602084224 0.0 32 0.0 0.0 0.0 32.3112384883976 0.0 33 0.0 0.0 0.0 32.764690440830094 0.0 34 3.5959710740086806E-4 0.0 0.0 33.20987165979237 0.0 35 3.5959710740086806E-4 0.0 0.0 33.67519031676909 0.0 36 3.5959710740086806E-4 0.0 0.0 34.121450327053566 0.0 37 3.5959710740086806E-4 0.0 0.0 34.575261876593466 0.0 38 3.5959710740086806E-4 0.0 0.0 35.05424522365142 0.0 39 3.5959710740086806E-4 0.0 0.0 35.50338201079511 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGCACG 20 7.0240523E-4 45.000004 1 CGGCGAA 20 7.0240523E-4 45.000004 31 ACCGGTG 20 7.0240523E-4 45.000004 17 CATATCC 20 7.0240523E-4 45.000004 34 GTATTAC 20 7.0240523E-4 45.000004 38 CTCCGGG 20 7.0240523E-4 45.000004 3 CCGATAG 20 7.0240523E-4 45.000004 40 CGGTTTT 40 6.7830115E-9 45.000004 1 AGGCGTA 20 7.0240523E-4 45.000004 6 CACGACC 35 1.2074815E-7 45.000004 27 TATTGTC 20 7.0240523E-4 45.000004 19 AGGCCGG 20 7.0240523E-4 45.000004 2 GTACTGG 20 7.0240523E-4 45.000004 2 AAACACG 35 1.2074815E-7 45.000004 40 AGACACG 35 1.2074815E-7 45.000004 24 GTATAAC 20 7.0240523E-4 45.000004 11 CCGGTGA 20 7.0240523E-4 45.000004 18 ACCCGTC 20 7.0240523E-4 45.000004 17 ACCCGGA 20 7.0240523E-4 45.000004 14 CACCGGT 20 7.0240523E-4 45.000004 16 >>END_MODULE