##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936676.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 247956 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.99884253657907 31.0 31.0 33.0 28.0 34.0 2 31.019826098178708 31.0 31.0 34.0 28.0 34.0 3 30.830994208649923 31.0 30.0 34.0 27.0 34.0 4 34.829360854345126 35.0 35.0 37.0 32.0 37.0 5 35.0439957089161 35.0 35.0 37.0 33.0 37.0 6 34.996430818371 35.0 35.0 37.0 32.0 37.0 7 31.038502798883673 35.0 35.0 37.0 0.0 37.0 8 32.86053170723838 35.0 33.0 37.0 17.0 37.0 9 35.80860717224024 37.0 34.0 39.0 32.0 39.0 10 35.900849344238495 37.0 35.0 39.0 32.0 39.0 11 36.15410395392731 37.0 35.0 39.0 32.0 39.0 12 36.212844214296084 37.0 35.0 39.0 32.0 39.0 13 35.93629514913936 37.0 35.0 39.0 31.0 39.0 14 37.030711093903754 39.0 36.0 40.0 31.0 41.0 15 37.07229508461179 39.0 35.0 40.0 32.0 41.0 16 37.24412799044992 39.0 36.0 40.0 32.0 41.0 17 37.00273435609544 39.0 35.0 40.0 31.0 41.0 18 36.91353304618561 38.0 35.0 40.0 31.0 41.0 19 36.70402813402378 38.0 35.0 40.0 31.0 41.0 20 36.5874308345029 38.0 35.0 40.0 31.0 41.0 21 36.762651438158386 38.0 35.0 40.0 31.0 41.0 22 36.79262853086838 38.0 35.0 40.0 31.0 41.0 23 36.86593992482537 38.0 35.0 40.0 31.0 41.0 24 36.67207488425366 38.0 35.0 40.0 31.0 41.0 25 36.52726290148252 38.0 35.0 40.0 31.0 41.0 26 36.351380890157934 38.0 35.0 40.0 30.0 41.0 27 36.43504492732582 38.0 35.0 40.0 31.0 41.0 28 36.36237074319637 38.0 35.0 40.0 30.0 41.0 29 36.296596976882995 38.0 35.0 40.0 30.0 41.0 30 36.10326025585184 38.0 35.0 40.0 30.0 41.0 31 36.07016567455516 38.0 35.0 40.0 30.0 41.0 32 35.906418880769166 38.0 35.0 40.0 30.0 41.0 33 35.69414331574957 38.0 35.0 40.0 28.0 41.0 34 35.49534594847473 38.0 34.0 40.0 27.0 41.0 35 35.46651018729129 38.0 34.0 40.0 27.0 41.0 36 35.42833405926858 38.0 35.0 40.0 27.0 41.0 37 35.3004686315314 38.0 34.0 40.0 26.0 41.0 38 35.15503153785349 38.0 34.0 40.0 26.0 41.0 39 35.053049734630335 38.0 34.0 40.0 25.0 41.0 40 34.8732678378422 38.0 34.0 40.0 25.0 41.0 41 34.59338350352482 38.0 33.0 40.0 23.0 41.0 42 34.83939489264224 38.0 34.0 40.0 24.0 41.0 43 34.861854522576586 38.0 34.0 40.0 24.0 41.0 44 34.634870702866635 38.0 34.0 40.0 23.0 41.0 45 34.62615141396054 37.0 34.0 40.0 23.0 41.0 46 34.42411153591766 37.0 33.0 40.0 23.0 41.0 47 34.307715885076384 37.0 33.0 40.0 23.0 41.0 48 34.23961912597397 37.0 33.0 40.0 23.0 41.0 49 34.182536417751535 37.0 33.0 40.0 23.0 41.0 50 34.004896029940795 37.0 33.0 40.0 22.0 41.0 51 32.187343722273305 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 15.0 10 14.0 11 13.0 12 11.0 13 6.0 14 11.0 15 22.0 16 39.0 17 72.0 18 158.0 19 290.0 20 533.0 21 813.0 22 1145.0 23 1564.0 24 2204.0 25 3058.0 26 3936.0 27 4362.0 28 4934.0 29 5593.0 30 6814.0 31 8536.0 32 11006.0 33 14769.0 34 21702.0 35 23474.0 36 24498.0 37 34078.0 38 43000.0 39 31278.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.13394311894046 17.663214441271837 20.14833276871703 14.054509671070676 2 30.324735033634997 33.21436061236671 20.50202455274323 15.95887980125506 3 28.448999015954445 30.547355175918305 26.740228104986368 14.26341770314088 4 26.271999870944846 21.282404942812434 35.3953927309684 17.050202455274324 5 30.508235332075046 26.03728080788527 25.039926438561682 18.414557421478005 6 22.623368662182 38.63467712013422 26.475261739986127 12.266692477697656 7 60.5994611947281 17.118359708980627 18.426656342254272 3.8555227540370067 8 67.18772685476455 13.349142589814322 13.593137492135702 5.869993063285421 9 62.428818016099626 7.578360676894287 14.246479214054105 15.746342092951975 10 41.32709029021278 20.939198890125667 22.482617883818097 15.251092935843454 11 32.76347416477117 22.27733952798077 26.532933262352998 18.42625304489506 12 28.60628498604591 19.75874751972124 30.896207391634 20.73876010259885 13 22.68829953701463 23.865524528545386 36.05236412911969 17.3938118053203 14 19.565164787300972 29.99967736211263 27.90091790478956 22.534239945796834 15 16.500508154672602 24.444256239010148 40.731420090661246 18.323815515656 16 18.246785720047104 24.418445208020778 31.681024052654504 25.65374501927761 17 18.77671845004759 24.616464211392344 33.21113423349304 23.39568310506703 18 19.077578280017423 25.7392440594299 32.00003226378874 23.183145396763944 19 20.882333962477215 26.326041717078834 29.10113084579522 23.690493474648726 20 22.668537966413396 24.99516043168949 34.5791188759296 17.75718272596751 21 22.029311652067303 29.489909500072592 30.027504879898046 18.45327396796206 22 19.65308361160851 22.89277129813354 30.908306312410268 26.54583877784768 23 20.55284002000355 28.650244398199682 30.558647501976154 20.238268079820614 24 22.14626788623788 23.87560696252561 29.21405410637371 24.7640710448628 25 18.899320847247093 30.740131313620157 29.23260578489732 21.12794205423543 26 18.271386858958845 24.87901079223733 30.60381680620755 26.245785542596266 27 21.8478278404233 27.225798125473876 28.58450692864863 22.341867105454195 28 15.85684556937521 25.256093823097647 35.68052396392908 23.206536643598056 29 20.284243978770427 22.842762425591637 29.9754795205601 26.89751407507784 30 19.46474374485796 26.315959283098618 34.792866476310316 19.42643049573311 31 23.145638742357516 23.520705286421784 28.794221555437254 24.539434415783447 32 22.59392795495975 26.35790220845634 28.0114213812128 23.036748455371114 33 21.721999064350126 24.10427656519705 26.325638419719628 27.848085950733193 34 21.17916081885496 26.546242075206894 28.553453031989545 23.721144073948604 35 19.82811466550517 21.702237493748893 31.73950216973979 26.730145671006145 36 21.585281259578313 24.111132620303604 28.792608366000422 25.510977754117665 37 18.725096388068852 24.653970865798772 34.18146767974963 22.439465066382745 38 21.84097178531675 25.478713965380955 28.707915920566553 23.972398328735743 39 21.901869686557294 25.21536078981755 27.456080917582153 25.426688606043008 40 23.389633644678895 22.764522737905114 32.94576457113359 20.900079046282404 41 17.257094000548484 27.593202019713175 28.39616706189808 26.753536917840258 42 19.196147703624835 22.875026214328347 35.11752085047347 22.811305231573346 43 23.285582926003002 21.434448047234188 26.98059333107487 28.299375695687946 44 20.995660520414912 23.55175918308087 30.32392843891658 25.128651857587634 45 19.786171740147445 23.066592459952574 28.737356627788802 28.40987917211118 46 25.22544322379777 26.007033505944605 27.154817790253112 21.612705480004518 47 18.74324476923325 22.369291325880397 37.02592395424995 21.861539950636402 48 21.168271790156318 24.637838971430416 28.481262804691156 25.712626433722114 49 19.458694284469825 21.589717530529608 35.131232960686575 23.820355224313992 50 21.16020584297214 21.198519092096983 31.5447095452419 26.096565519688973 51 20.485892658374873 21.992208295020085 27.87591346851861 29.645985578086435 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 111.0 1 333.5 2 556.0 3 2112.0 4 3668.0 5 2567.0 6 1466.0 7 1318.5 8 1171.0 9 1136.5 10 1102.0 11 1102.0 12 1102.0 13 1058.5 14 1015.0 15 1005.5 16 996.0 17 887.0 18 778.0 19 751.0 20 724.0 21 846.5 22 969.0 23 1087.5 24 1206.0 25 1308.0 26 1661.5 27 1913.0 28 2568.5 29 3224.0 30 3675.5 31 4127.0 32 4224.0 33 4321.0 34 4825.0 35 5329.0 36 5825.0 37 6321.0 38 7016.5 39 7712.0 40 9054.0 41 10396.0 42 11706.5 43 13017.0 44 15149.5 45 17282.0 46 29548.5 47 41815.0 48 32398.5 49 22982.0 50 21946.5 51 20911.0 52 17657.0 53 14403.0 54 12821.5 55 11240.0 56 10956.5 57 10673.0 58 9380.5 59 8088.0 60 7878.5 61 7669.0 62 6950.5 63 6232.0 64 5314.0 65 4396.0 66 3786.5 67 3177.0 68 2672.0 69 2167.0 70 1851.5 71 1536.0 72 1315.0 73 1094.0 74 929.5 75 591.5 76 418.0 77 366.5 78 315.0 79 195.0 80 75.0 81 50.0 82 25.0 83 23.5 84 22.0 85 19.0 86 16.0 87 12.5 88 9.0 89 7.5 90 6.0 91 4.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 247956.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.696075110100175 #Duplication Level Percentage of deduplicated Percentage of total 1 75.67504736664691 26.2562712739357 2 8.680591879671281 6.023649357144009 3 3.4743290209343143 3.6163674200261333 4 1.945810231195732 2.70047911726274 5 1.354163034255094 2.349207117391795 6 0.9391963362043914 1.9551855974447079 7 0.7648405807209029 1.8575876365161563 8 0.6265183480373354 1.739018212908742 9 0.5428275854052609 1.6950588007549727 >10 5.869977101277446 37.07109325848134 >50 0.07671653241273495 1.7962864379164045 >100 0.038358266206367474 2.72225717466002 >500 0.004649486812893027 1.2990207940118408 >1k 0.004649486812893027 4.044265918146768 >5k 0.0023247434064465134 4.874251883398668 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGC 6079 2.4516446466308537 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCG 6007 2.4226072367678135 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTC 4990 2.0124538224523705 RNA PCR Primer, Index 21 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2041 0.8231299101453484 No Hit GCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 1860 0.7501330881285388 TruSeq Adapter, Index 21 (96% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCT 1137 0.45854909742051003 RNA PCR Primer, Index 21 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCT 963 0.38837535691816294 RNA PCR Primer, Index 14 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTC 935 0.3770830308603139 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTCGATCTCGTA 813 0.3278807530368291 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCG 510 0.2056816531965349 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGC 497 0.2004387875268193 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 488 0.19680911129393927 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 447 0.18027391956637467 No Hit GAATCTATCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTC 443 0.17866073012953912 RNA PCR Primer, Index 14 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 398 0.16051234896513897 RNA PCR Primer, Index 21 (96% over 26bp) CTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGCT 332 0.1338947232573521 RNA PCR Primer, Index 21 (96% over 27bp) GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 315 0.12703866815080095 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 275 0.11090677378244529 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.032973592088919E-4 0.0 0.0 0.15607607801384116 0.0 2 4.032973592088919E-4 0.0 0.0 1.3974253496588105 0.0 3 4.032973592088919E-4 0.0 0.0 1.626498249689461 0.0 4 4.032973592088919E-4 0.0 0.0 2.353643388343093 0.0 5 4.032973592088919E-4 0.0 0.0 5.346109793673071 0.0 6 4.032973592088919E-4 0.0 0.0 5.931294261885173 0.0 7 4.032973592088919E-4 0.0 0.0 6.879849650744487 0.0 8 4.032973592088919E-4 0.0 0.0 8.055864750197616 0.0 9 4.032973592088919E-4 0.0 0.0 8.328897062382035 0.0 10 4.032973592088919E-4 0.0 0.0 11.728290503153785 0.0 11 4.032973592088919E-4 0.0 0.0 12.564325928793819 0.0 12 4.032973592088919E-4 0.0 0.0 16.18593621448967 0.0 13 4.032973592088919E-4 0.0 0.0 16.620287470357646 0.0 14 4.032973592088919E-4 0.0 0.0 16.86105599380535 0.0 15 4.032973592088919E-4 0.0 0.0 17.478100953394957 0.0 16 4.032973592088919E-4 0.0 0.0 18.050783203471585 0.0 17 4.032973592088919E-4 0.0 0.0 18.640403942634983 0.0 18 4.032973592088919E-4 0.0 0.0 19.280436851699495 0.0 19 4.032973592088919E-4 0.0 0.0 19.765603574827793 0.0 20 4.032973592088919E-4 0.0 0.0 20.161641581570922 0.0 21 4.032973592088919E-4 0.0 0.0 20.633096194486118 0.0 22 4.032973592088919E-4 0.0 0.0 21.133184919905144 0.0 23 4.032973592088919E-4 0.0 0.0 21.57963509654939 0.0 24 4.032973592088919E-4 0.0 0.0 21.962364290438625 0.0 25 4.032973592088919E-4 0.0 0.0 22.29548790914517 0.0 26 4.032973592088919E-4 0.0 0.0 22.62417525690042 0.0 27 4.032973592088919E-4 0.0 0.0 22.950039523141204 0.0 28 4.032973592088919E-4 0.0 0.0 23.27550049202278 0.0 29 4.032973592088919E-4 0.0 0.0 23.609027408088533 0.0 30 4.032973592088919E-4 0.0 0.0 23.976431302327832 0.0 31 4.032973592088919E-4 0.0 0.0 24.321653841810644 0.0 32 4.032973592088919E-4 0.0 0.0 24.677765409992094 0.0 33 4.032973592088919E-4 0.0 0.0 25.0544451434932 0.0 34 4.032973592088919E-4 0.0 0.0 25.37829292293794 0.0 35 4.032973592088919E-4 0.0 0.0 25.754569359079838 0.0 36 4.032973592088919E-4 0.0 0.0 26.10745454838762 0.0 37 4.032973592088919E-4 0.0 0.0 26.440981464453372 0.0 38 4.032973592088919E-4 0.0 0.0 26.767652325412573 0.0 39 4.032973592088919E-4 0.0 0.0 27.111664972817756 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACCGAT 70 0.0 45.000004 9 CGATTAG 20 7.022574E-4 45.000004 42 TGACCTA 20 7.022574E-4 45.000004 23 AAGCCCG 30 2.158593E-6 45.000004 26 TTGGTAG 20 7.022574E-4 45.000004 1 ATGGTTC 20 7.022574E-4 45.000004 36 TACTAGA 20 7.022574E-4 45.000004 30 TTGCCAG 20 7.022574E-4 45.000004 15 ATTGCGG 20 7.022574E-4 45.000004 2 CCCGATC 20 7.022574E-4 45.000004 41 TCACGGT 25 3.88193E-5 45.0 31 CCGATTA 25 3.88193E-5 45.0 18 TCCTCAC 25 3.88193E-5 45.0 17 CGATTTA 25 3.88193E-5 45.0 10 TAGCCCG 25 3.88193E-5 45.0 13 TCGGCTC 25 3.88193E-5 45.0 45 TACGAGG 50 2.1827873E-11 45.0 2 CGTGTAC 55 1.8189894E-12 45.0 18 ATACGAG 25 3.88193E-5 45.0 1 TTACCGA 25 3.88193E-5 45.0 43 >>END_MODULE