##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936675.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 287558 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.082449453675434 31.0 31.0 33.0 28.0 34.0 2 31.09755249375778 31.0 31.0 34.0 28.0 34.0 3 30.877868117040737 31.0 30.0 34.0 28.0 34.0 4 34.88416597695074 35.0 35.0 37.0 32.0 37.0 5 35.08155224337351 35.0 35.0 37.0 33.0 37.0 6 35.034664311199826 35.0 35.0 37.0 32.0 37.0 7 31.11648084908088 35.0 35.0 37.0 0.0 37.0 8 32.900562669096324 35.0 35.0 37.0 17.0 37.0 9 35.77055759185973 37.0 34.0 39.0 32.0 39.0 10 35.97554928049298 37.0 35.0 39.0 32.0 39.0 11 36.228896431328636 37.0 35.0 39.0 32.0 39.0 12 36.2526133858213 37.0 35.0 39.0 32.0 39.0 13 35.9007678450956 37.0 35.0 39.0 30.0 39.0 14 37.08817003874001 39.0 36.0 40.0 32.0 41.0 15 37.07405114794233 39.0 35.0 40.0 31.0 41.0 16 37.365515826372416 39.0 36.0 40.0 32.0 41.0 17 37.00331759158153 39.0 35.0 40.0 31.0 41.0 18 36.972805486197565 39.0 35.0 40.0 31.0 41.0 19 36.72057115434104 38.0 35.0 40.0 31.0 41.0 20 36.548804067353366 38.0 35.0 40.0 31.0 41.0 21 36.850670125678995 38.0 35.0 40.0 31.0 41.0 22 36.866534751250185 39.0 35.0 40.0 31.0 41.0 23 36.977016810521704 39.0 35.0 40.0 32.0 41.0 24 36.78996932792689 38.0 35.0 40.0 31.0 41.0 25 36.66782005717108 38.0 35.0 40.0 31.0 41.0 26 36.4646332218196 38.0 35.0 40.0 31.0 41.0 27 36.527806564240954 38.0 35.0 40.0 31.0 41.0 28 36.45269128314983 38.0 35.0 40.0 30.0 41.0 29 36.32705054284701 38.0 35.0 40.0 30.0 41.0 30 36.242267646874716 38.0 35.0 40.0 30.0 41.0 31 36.266304536823874 38.0 35.0 40.0 30.0 41.0 32 35.95184623623756 38.0 35.0 40.0 30.0 41.0 33 35.71747612655534 38.0 35.0 40.0 29.0 41.0 34 35.581698300864524 38.0 35.0 40.0 27.0 41.0 35 35.53091550226389 38.0 35.0 40.0 27.0 41.0 36 35.426049701277655 38.0 35.0 40.0 27.0 41.0 37 35.24072013298187 38.0 34.0 40.0 26.0 41.0 38 35.17563413294014 38.0 34.0 40.0 26.0 41.0 39 35.03172925114238 38.0 34.0 40.0 25.0 41.0 40 34.94220644183086 38.0 34.0 40.0 24.0 41.0 41 34.714384576328946 38.0 34.0 40.0 24.0 41.0 42 34.69548751903964 38.0 34.0 40.0 23.0 41.0 43 34.61981235089964 38.0 34.0 40.0 23.0 41.0 44 34.48353027910891 38.0 33.0 40.0 23.0 41.0 45 34.477142002656855 37.0 33.0 40.0 23.0 41.0 46 34.265546428894346 37.0 33.0 40.0 22.0 41.0 47 34.051200105717804 37.0 33.0 40.0 22.0 41.0 48 34.040350120671306 37.0 33.0 40.0 22.0 41.0 49 33.9731393318913 37.0 33.0 40.0 22.0 41.0 50 33.81731685433895 37.0 33.0 40.0 20.0 41.0 51 31.975757934051565 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 19.0 10 28.0 11 22.0 12 10.0 13 5.0 14 17.0 15 18.0 16 32.0 17 73.0 18 213.0 19 424.0 20 650.0 21 1067.0 22 1459.0 23 2054.0 24 2691.0 25 3609.0 26 4571.0 27 5138.0 28 5762.0 29 6366.0 30 7559.0 31 9651.0 32 12542.0 33 16747.0 34 24755.0 35 26623.0 36 27610.0 37 38483.0 38 50526.0 39 38820.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.654128906168495 16.81052170344765 19.30636602007247 13.228983370311381 2 29.170463002246507 35.62133552187732 19.972666383825178 15.235535092050995 3 27.240417585321918 34.381933383873864 25.08815612850277 13.289492902301447 4 25.280117402402297 20.862226055265374 37.681789412918434 16.17586712941389 5 33.161657822074154 24.85272536323107 23.567071686407612 18.418545128287164 6 21.64189485251671 40.86375618136167 25.426522649343784 12.067826316777833 7 58.57114043080005 16.931888523358765 20.88413467891695 3.6128363669242383 8 65.37046439327023 15.835761828917994 13.674110961962457 5.119662815849324 9 60.28522941458767 7.817553328372015 13.759658920982897 18.13755833605742 10 41.04737131291774 22.6823805980011 21.29622545712517 14.974022631955988 11 34.863923104208546 22.686553669172827 25.879300871476364 16.570222355142267 12 30.899157735135173 19.677073842494384 28.4502604691923 20.973507953178142 13 23.061782318697446 24.167993935136565 35.9617885783042 16.808435167861788 14 19.500066073626883 30.630342400489642 26.965690399849766 22.903901126033706 15 16.780266937452616 24.37038788696541 41.26158896639982 17.58775620918215 16 17.78145626273656 24.138434681003485 31.477128092419616 26.602980963840338 17 18.113215420889002 23.788939970371196 34.811411958630956 23.28643265010885 18 19.211080894984665 25.58892466911023 31.148846493576947 24.051147942328157 19 21.075052685023543 28.24960529701834 27.56974245195752 23.1055995660006 20 24.70284255697981 24.909409579980387 34.31099117395447 16.076756689085332 21 22.176047962498 32.31452437421321 27.98948386064724 17.519943802641556 22 18.988864855090103 23.635231848879183 30.943670494300278 26.432232801730432 23 20.385800429826332 31.296642764242343 29.6291530752057 18.68840373072563 24 22.860083878730553 23.380326751472747 28.168230409169624 25.591358960627076 25 18.781950076158548 33.790748301212275 26.964647132056836 20.462654490572337 26 18.300655867685823 26.794594481808886 30.25650477468893 24.648244875816356 27 22.38748356853226 30.023160545003098 25.746805861773975 21.84255002469067 28 17.85100744893204 27.083231904520133 34.55546359343158 20.51029705311624 29 21.55599913756529 27.089143755346747 29.459100424957747 21.895756682130212 30 18.630328490252403 32.840331341851034 30.39908470638967 18.1302554615069 31 27.015071742048562 24.46741179170811 24.183295196099568 24.334221270143765 32 25.29611417522726 29.722003908776664 27.157999429680274 17.823882486315803 33 22.08910897975365 28.63630989226521 24.03236912205538 25.24221200592576 34 22.114495162715002 29.053269253507118 26.233316409211362 22.59891917456652 35 20.087773596978696 27.648683048289392 25.102066365741866 27.161476988990046 36 27.13748182975261 30.718672406957904 23.124726142204356 19.01911962108514 37 19.488242371973655 29.81589801014056 31.590496525918248 19.105363091967533 38 23.57402680502716 29.965780816391824 24.276146029670535 22.18404634891048 39 22.82739482121868 24.050104674535223 29.606548939692168 23.515951564553934 40 21.066011030818128 27.516188038586996 27.854902315358988 23.562898615235884 41 21.472537714130716 26.318168856369844 25.44217166623777 26.76712176326167 42 19.011121234672657 24.233024294229338 31.505296322828784 25.25055814826922 43 27.501234533554967 23.822672295676004 24.81134240744476 23.86475076332427 44 22.701507174204856 24.94522844087106 28.93259794545796 23.420666439466125 45 19.345662440272918 24.28623095166888 27.466806696388208 28.90129991166999 46 25.181354718004716 29.957782429979346 23.79937264830052 21.061490203715426 47 18.46201461965934 24.213202206163626 35.95622448340857 21.36855869076847 48 22.03277251893531 26.306692910647588 26.141856599364306 25.518677971052796 49 19.122750888516403 22.797487811154618 34.630926630453686 23.448834669875296 50 21.41411471772651 23.54446755089408 29.435105265720306 25.606312465659105 51 20.828493729960567 24.14330326403717 26.377982876497956 28.650220129504312 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 73.0 1 351.0 2 629.0 3 2539.0 4 4449.0 5 3096.5 6 1744.0 7 1609.5 8 1475.0 9 1425.0 10 1375.0 11 1321.0 12 1267.0 13 1193.0 14 1119.0 15 1044.5 16 970.0 17 1020.0 18 1070.0 19 1065.0 20 1060.0 21 1161.5 22 1263.0 23 1271.5 24 1280.0 25 1472.5 26 2204.0 27 2743.0 28 2740.5 29 2738.0 30 3769.0 31 4800.0 32 5296.0 33 5792.0 34 6921.5 35 8051.0 36 8069.5 37 8088.0 38 9106.5 39 10125.0 40 11171.5 41 12218.0 42 13667.5 43 15117.0 44 17574.0 45 20031.0 46 36261.0 47 52491.0 48 37427.5 49 22364.0 50 21274.0 51 20184.0 52 17509.0 53 14834.0 54 14008.0 55 13182.0 56 12212.5 57 11243.0 58 10984.5 59 10726.0 60 10292.5 61 9859.0 62 9129.5 63 8400.0 64 6977.5 65 5555.0 66 4486.5 67 3418.0 68 2856.5 69 2295.0 70 1855.0 71 1415.0 72 1243.0 73 1071.0 74 819.0 75 460.0 76 353.0 77 274.5 78 196.0 79 178.0 80 160.0 81 106.0 82 52.0 83 37.5 84 23.0 85 14.5 86 6.0 87 5.0 88 4.0 89 6.5 90 9.0 91 8.5 92 8.0 93 4.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 287558.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.72667079337038 #Duplication Level Percentage of deduplicated Percentage of total 1 75.61257172606585 23.233225992669304 2 8.092171531401021 4.9729098129768605 3 3.389657865251197 3.1245870398319644 4 2.011159274307638 2.4718491573873793 5 1.437350747535566 2.2082501617065082 6 0.9970913453376643 1.8382378511465514 7 0.7616827189696346 1.6382781908345447 8 0.6394513168170037 1.571856808017861 9 0.48213497515759934 1.3332962393673624 >10 6.417148613013117 40.752474283448905 >50 0.10751836300462894 2.2002517752940274 >100 0.03961202847538961 2.430118445670091 >500 0.0022635444843079775 0.4726003101982904 >1k 0.0067906334529239335 3.29116213077014 >5k 0.0033953167264619668 8.460901800680212 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 9172 3.1896173989247387 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 9088 3.160405900722637 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 6070 2.1108785010328353 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2264 0.78731942773284 No Hit GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 2103 0.7313307228454781 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCT 1676 0.5828389403181271 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTA 1193 0.4148728256560415 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTC 1188 0.4131340460011545 No Hit GAACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCT 1040 0.36166616821649894 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 682 0.2371695449265887 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 677 0.2354307652717017 No Hit GAATCTATCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 468 0.16274977569742452 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGTACCGT 369 0.12832193853066165 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 344 0.11962804025622657 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTT 328 0.11406394536058813 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATG 315 0.10954311825788188 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTAT 303 0.10537004708615307 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGT 298 0.10363126743126604 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 290 0.10084921998344681 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.477559309774028E-4 0.0 0.0 0.12067130804915878 0.0 2 3.477559309774028E-4 0.0 0.0 1.2032355211818138 0.0 3 3.477559309774028E-4 0.0 0.0 1.3757224629466056 0.0 4 3.477559309774028E-4 0.0 0.0 1.9867296336739022 0.0 5 3.477559309774028E-4 0.0 0.0 4.923180714847092 0.0 6 3.477559309774028E-4 0.0 0.0 5.372481377669896 0.0 7 3.477559309774028E-4 0.0 0.0 6.314899950618658 0.0 8 3.477559309774028E-4 0.0 0.0 7.2135012762642665 0.0 9 3.477559309774028E-4 0.0 0.0 7.411722156921386 0.0 10 3.477559309774028E-4 0.0 0.0 11.578881477823604 0.0 11 3.477559309774028E-4 0.0 0.0 12.159633882555868 0.0 12 3.477559309774028E-4 0.0 0.0 16.40538604385898 0.0 13 3.477559309774028E-4 0.0 0.0 16.785483276417278 0.0 14 3.477559309774028E-4 0.0 0.0 17.001787465485222 0.0 15 3.477559309774028E-4 0.0 0.0 17.70147239861176 0.0 16 3.477559309774028E-4 0.0 0.0 18.185200898601327 0.0 17 3.477559309774028E-4 0.0 0.0 18.63450156142413 0.0 18 3.477559309774028E-4 0.0 0.0 19.060154820940472 0.0 19 3.477559309774028E-4 0.0 0.0 19.49937056176493 0.0 20 3.477559309774028E-4 0.0 0.0 19.813046411506548 0.0 21 3.477559309774028E-4 0.0 0.0 20.152108444209517 0.0 22 3.477559309774028E-4 0.0 0.0 20.52212075476947 0.0 23 3.477559309774028E-4 0.0 0.0 20.878222828090333 0.0 24 3.477559309774028E-4 0.0 0.0 21.152254501700526 0.0 25 3.477559309774028E-4 0.0 0.0 21.412375938071623 0.0 26 3.477559309774028E-4 0.0 0.0 21.64572016775746 0.0 27 3.477559309774028E-4 0.0 0.0 21.909319163438333 0.0 28 3.477559309774028E-4 0.0 0.0 22.133969494849733 0.0 29 3.477559309774028E-4 0.0 0.0 22.38365825329151 0.0 30 3.477559309774028E-4 0.0 0.0 22.675425479381552 0.0 31 3.477559309774028E-4 0.0 0.0 22.958498807197156 0.0 32 3.477559309774028E-4 0.0 0.0 23.223836582532915 0.0 33 3.477559309774028E-4 0.0 0.0 23.47908943587033 0.0 34 3.477559309774028E-4 0.0 0.0 23.74651374679195 0.0 35 3.477559309774028E-4 0.0 0.0 24.04245404405372 0.0 36 3.477559309774028E-4 0.0 0.0 24.330048198972033 0.0 37 3.477559309774028E-4 0.0 0.0 24.598168021755612 0.0 38 3.477559309774028E-4 0.0 0.0 24.879850325847308 0.0 39 3.477559309774028E-4 0.0 0.0 25.161532629939003 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTT 30 2.1598062E-6 45.000004 27 CCTACGA 30 2.1598062E-6 45.000004 28 TAGGGCG 30 2.1598062E-6 45.000004 5 AGCTACG 60 0.0 45.000004 9 CTTAACA 20 7.024456E-4 45.0 38 TTAGGAC 20 7.024456E-4 45.0 29 CTTTTAG 20 7.024456E-4 45.0 15 TGTATCG 20 7.024456E-4 45.0 4 AGGCGAT 35 1.2076816E-7 45.0 7 ACGGGAA 35 1.2076816E-7 45.0 5 ACGATGG 20 7.024456E-4 45.0 2 TACGATC 20 7.024456E-4 45.0 13 GTATGCG 20 7.024456E-4 45.0 1 CATACGA 40 6.7848305E-9 45.0 18 GTATCGC 20 7.024456E-4 45.0 5 ATCGCCA 20 7.024456E-4 45.0 7 CTTACGA 20 7.024456E-4 45.0 11 TCTATAC 20 7.024456E-4 45.0 40 ACGGTAG 20 7.024456E-4 45.0 1 GCGAAGT 25 3.8834885E-5 44.999996 43 >>END_MODULE