##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936673.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 724006 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.276283621958935 31.0 31.0 33.0 30.0 34.0 2 31.30125717190189 31.0 31.0 34.0 30.0 34.0 3 31.104564050574165 31.0 31.0 34.0 28.0 34.0 4 35.07602285063936 35.0 35.0 37.0 32.0 37.0 5 35.26076303235056 35.0 35.0 37.0 33.0 37.0 6 35.22635724013337 36.0 35.0 37.0 33.0 37.0 7 30.917446816739087 35.0 35.0 37.0 0.0 37.0 8 32.9756079369508 35.0 35.0 37.0 17.0 37.0 9 36.26491493164421 39.0 35.0 39.0 32.0 39.0 10 36.17229415225841 37.0 35.0 39.0 32.0 39.0 11 36.414562862738705 38.0 35.0 39.0 32.0 39.0 12 36.45196586768618 38.0 35.0 39.0 32.0 39.0 13 36.29457214442974 38.0 35.0 39.0 32.0 39.0 14 37.29208183357596 39.0 36.0 40.0 32.0 41.0 15 37.45247276956268 39.0 36.0 41.0 32.0 41.0 16 37.50853998447527 39.0 36.0 41.0 33.0 41.0 17 37.36901075405452 39.0 36.0 41.0 32.0 41.0 18 37.308599652489065 39.0 36.0 40.0 32.0 41.0 19 37.123581848769206 39.0 35.0 40.0 32.0 41.0 20 37.05528545343547 39.0 35.0 40.0 32.0 41.0 21 37.12520200108839 39.0 35.0 40.0 32.0 41.0 22 37.24107949381635 39.0 35.0 40.0 32.0 41.0 23 37.3179006803811 39.0 35.0 40.0 32.0 41.0 24 37.24723137653555 39.0 35.0 41.0 32.0 41.0 25 36.941622030756655 39.0 35.0 40.0 31.0 41.0 26 36.913572539454094 39.0 35.0 40.0 31.0 41.0 27 36.95125454761425 39.0 35.0 40.0 32.0 41.0 28 36.890021629655 39.0 35.0 40.0 31.0 41.0 29 36.808694955566665 39.0 35.0 40.0 31.0 41.0 30 36.62745198244213 39.0 35.0 40.0 31.0 41.0 31 36.64276124783496 39.0 35.0 40.0 31.0 41.0 32 36.5017707035577 39.0 35.0 40.0 31.0 41.0 33 36.34215462302799 39.0 35.0 40.0 30.0 41.0 34 36.213768946666185 39.0 35.0 40.0 30.0 41.0 35 36.139087245133325 39.0 35.0 40.0 30.0 41.0 36 36.08195097830681 38.0 35.0 40.0 30.0 41.0 37 35.99016030253893 38.0 35.0 40.0 29.0 41.0 38 35.8377623942343 38.0 35.0 40.0 29.0 41.0 39 35.742989698980395 38.0 35.0 40.0 29.0 41.0 40 35.535396115501804 38.0 35.0 40.0 27.0 41.0 41 35.36040032817407 38.0 34.0 40.0 26.0 41.0 42 35.371962387052044 38.0 34.0 40.0 27.0 41.0 43 35.37057013339668 38.0 34.0 40.0 27.0 41.0 44 35.2378516200142 38.0 34.0 40.0 27.0 41.0 45 35.194450045994095 38.0 34.0 40.0 26.0 41.0 46 35.10448670314887 38.0 34.0 40.0 26.0 41.0 47 34.98835783128869 37.0 34.0 40.0 26.0 41.0 48 34.893947011488855 37.0 34.0 40.0 26.0 41.0 49 34.777988027723524 37.0 34.0 40.0 26.0 41.0 50 34.61974210158479 37.0 34.0 40.0 24.0 41.0 51 32.872275920365304 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 39.0 9 55.0 10 88.0 11 52.0 12 38.0 13 34.0 14 41.0 15 53.0 16 87.0 17 184.0 18 386.0 19 719.0 20 1394.0 21 1982.0 22 2942.0 23 3888.0 24 5229.0 25 6924.0 26 8757.0 27 9985.0 28 11470.0 29 12920.0 30 16095.0 31 20712.0 32 27690.0 33 39148.0 34 59393.0 35 62222.0 36 73898.0 37 108279.0 38 138474.0 39 110815.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.80515354845125 19.358264986754254 22.86514200158562 12.97143946320887 2 31.528606116523893 28.27725184597918 23.831708577000743 16.362433460496185 3 31.456645386916684 26.9743620909219 26.126026579890222 15.442965942271197 4 28.76233069891686 23.86195694510819 29.214951257310023 18.160761098664928 5 27.805570672066253 28.21081593246465 24.148694900318507 19.834918495150593 6 25.410010414278332 36.03948033579832 24.484327477949076 14.066181771974264 7 67.27527119940994 17.754548995450314 11.332779010118701 3.6374007950210356 8 78.74437504661563 7.795929867984519 9.416910909578096 4.0427841758217475 9 73.36941959044539 6.573978668685067 10.74631978188026 9.31028195898929 10 44.96316328870203 21.660593972978123 18.363521849266444 15.012720889053405 11 32.84558415261752 24.321207282812573 24.013613146852375 18.819595417717533 12 29.942845777521182 20.713640494692033 28.92075480037458 20.422758927412204 13 26.680441874791093 21.95727659715527 32.21174962638431 19.150531901669325 14 21.11073665135372 26.512211224768855 30.533034256622184 21.844017867255243 15 20.062817158973818 24.51637141128665 35.17926647016738 20.24154495957216 16 24.372726192876854 24.193031549462297 29.898371007975072 21.535871249685776 17 24.90310853777455 23.834470985047084 28.593547567285356 22.66887290989301 18 25.28749761742306 24.05532550835214 28.88470537536982 21.77247149885498 19 25.43501020709773 26.55309486385472 26.191633770990848 21.8202611580567 20 25.945226973257128 25.848542691635153 28.426283760079336 19.779946575028383 21 26.462073518727745 26.535691693162768 28.689403126493428 18.312831661616062 22 24.26361107504634 22.487106460443698 29.95223796487874 23.29704449963122 23 23.146907622312522 25.04868744181678 29.617986591271343 22.186418344599353 24 24.42465946414809 24.629215779979724 27.998939235310203 22.947185520561984 25 24.751452336030365 26.7604135877327 26.32409123681295 22.164042839423985 26 22.093601434242256 24.574658221064468 28.017999850829966 25.313740493863314 27 23.204641950481072 25.226586520001216 28.488023579915083 23.080747949602628 28 21.437943884442948 24.273003262403904 30.96977096874888 23.319281884404273 29 22.905611279464537 24.23350082734121 29.677654605072334 23.183233288121922 30 23.06182545448518 24.460018287141267 31.451673052433264 21.026483205940284 31 24.529216608702136 23.784057038201343 29.183736046386354 22.502990306710167 32 26.04356869970691 25.48666723756433 26.559586522763624 21.91017753996514 33 26.649641025074377 23.078538023165553 26.258069684505376 24.01375126725469 34 23.782123352568902 23.85242663734831 29.413430275439705 22.952019734643084 35 22.708927826564974 26.5642826164424 27.510821733521546 23.215967823471075 36 25.577274221484352 25.982105120675797 28.10515382469206 20.33546683314779 37 23.684057866923755 26.385278575039433 27.88554238500786 22.045121173028953 38 24.38239462103905 26.06249119482435 26.670359085421946 22.884755098714653 39 24.127976839970938 23.980602370698588 26.52022220810325 25.371198581227226 40 25.890807534744187 24.24164993107792 28.023386546520335 21.844155987657558 41 22.72577851564766 24.738054657005605 27.445352662823236 25.0908141645235 42 21.86763645605147 25.411115377496873 30.19726355858929 22.523984607862367 43 24.301041704074276 23.20229390364168 28.074214854573025 24.422449537711014 44 23.482125838736142 23.634887003698864 28.39741659599506 24.48557056156993 45 22.166805247470325 23.219697074333638 27.361927939823705 27.251569738372332 46 24.1623688201479 25.33860216628039 27.082924727143144 23.416104286428567 47 21.887940155192084 24.177838305207416 31.24090131849736 22.69332022110314 48 22.33475965668793 25.299652212826967 28.58595094515791 23.779637185327193 49 22.7745350176656 23.500219611439686 30.129170200246957 23.596075170647758 50 21.66459946464532 23.903116824998687 30.003756874943026 24.428526835412967 51 21.625235149984945 23.90435990861954 28.438300235080927 26.03210470631459 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 272.0 1 871.5 2 1471.0 3 3623.5 4 5776.0 5 4019.0 6 2262.0 7 2191.5 8 2121.0 9 2071.5 10 2022.0 11 1941.5 12 1861.0 13 1900.0 14 1939.0 15 1861.0 16 1783.0 17 1676.0 18 1569.0 19 1696.5 20 1824.0 21 1959.0 22 2094.0 23 2263.5 24 2433.0 25 3137.0 26 4580.5 27 5320.0 28 6208.0 29 7096.0 30 8922.0 31 10748.0 32 12264.0 33 13780.0 34 16450.0 35 19120.0 36 20227.5 37 21335.0 38 22941.0 39 24547.0 40 27069.0 41 29591.0 42 32872.5 43 36154.0 44 38871.5 45 41589.0 46 59894.5 47 78200.0 48 66819.5 49 55439.0 50 55159.0 51 54879.0 52 49820.5 53 44762.0 54 42612.0 55 40462.0 56 40428.0 57 40394.0 58 39770.0 59 39146.0 60 37124.0 61 35102.0 62 31884.5 63 28667.0 64 25812.5 65 22958.0 66 19342.5 67 15727.0 68 13276.5 69 10826.0 70 9126.5 71 7427.0 72 5817.5 73 4208.0 74 3256.5 75 1889.0 76 1473.0 77 1109.0 78 745.0 79 551.5 80 358.0 81 277.0 82 196.0 83 152.5 84 109.0 85 70.0 86 31.0 87 29.0 88 27.0 89 17.0 90 7.0 91 6.0 92 5.0 93 5.0 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 724006.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.53004486777348 #Duplication Level Percentage of deduplicated Percentage of total 1 73.108923928432 21.589098038412352 2 8.464540098995087 4.999164978167855 3 3.699584007993225 3.277466452444115 4 2.3188140730966635 2.738987344742762 5 1.5863086068781291 2.3421882167623203 6 1.1709531998174298 2.0746980317202977 7 0.8779744682569439 1.8148637808270984 8 0.7147616444313012 1.6885554743855904 9 0.5297654068904991 1.4079596611383645 >10 7.330134344777041 48.581549645408586 >50 0.1601706699075496 2.903029324104295 >100 0.03156987116634192 1.8113257816325428 >500 0.00232131405634867 0.41992816145477435 >1k 0.0027855768676184043 1.6150028540441532 >5k 0.0013927884338092022 2.7361822547549415 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTC 7395 1.0214003751350127 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCG 6380 0.8812081667831482 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGC 6183 0.853998447526678 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTT 3252 0.4491675483352348 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2877 0.3973723974663193 No Hit GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 1894 0.2616000419886023 No Hit GAACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCT 1489 0.20566127905017362 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCT 1157 0.1598053054808938 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTC 1111 0.15345176697430685 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTA 737 0.10179473650770851 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.762408046342157E-4 0.0 0.0 0.06560719110062624 0.0 2 2.762408046342157E-4 0.0 0.0 0.5042775888597608 0.0 3 2.762408046342157E-4 0.0 0.0 0.6392212219235752 0.0 4 2.762408046342157E-4 0.0 0.0 1.0051021676615939 0.0 5 2.762408046342157E-4 0.0 0.0 2.5140675629759976 0.0 6 2.762408046342157E-4 0.0 0.0 3.336850799579009 0.0 7 2.762408046342157E-4 0.0 0.0 3.752869451358138 0.0 8 2.762408046342157E-4 0.0 0.0 4.3158482112026695 0.0 9 2.762408046342157E-4 0.0 0.0 4.477863443120637 0.0 10 2.762408046342157E-4 0.0 0.0 5.813211492722436 0.0 11 2.762408046342157E-4 0.0 0.0 6.339035864343666 0.0 12 2.762408046342157E-4 0.0 0.0 7.7496595332082885 0.0 13 2.762408046342157E-4 0.0 0.0 8.047861481810925 0.0 14 2.762408046342157E-4 0.0 0.0 8.21761145625865 0.0 15 2.762408046342157E-4 0.0 0.0 8.487913083593229 0.0 16 2.762408046342157E-4 0.0 0.0 8.800893915243796 0.0 17 2.762408046342157E-4 0.0 0.0 9.131830399195588 0.0 18 2.762408046342157E-4 0.0 0.0 9.51566699723483 0.0 19 2.762408046342157E-4 0.0 0.0 9.791907801869046 0.0 20 2.762408046342157E-4 0.0 0.0 10.055027168283136 0.0 21 2.762408046342157E-4 0.0 0.0 10.328367444468693 0.0 22 2.762408046342157E-4 0.0 0.0 10.643143841349382 0.0 23 2.762408046342157E-4 0.0 0.0 10.910959301442253 0.0 24 4.143612069513236E-4 0.0 0.0 11.16040474802695 0.0 25 4.143612069513236E-4 0.0 0.0 11.366756629088709 0.0 26 4.143612069513236E-4 0.0 0.0 11.599903868199988 0.0 27 4.143612069513236E-4 0.0 0.0 11.868962411913714 0.0 28 4.143612069513236E-4 0.0 0.0 12.093822426885964 0.0 29 4.143612069513236E-4 0.0 0.0 12.34147230824054 0.0 30 4.143612069513236E-4 0.0 0.0 12.637326210003785 0.0 31 4.143612069513236E-4 0.0 0.0 12.884976091358359 0.0 32 4.143612069513236E-4 0.0 0.0 13.117294608055735 0.0 33 4.143612069513236E-4 0.0 0.0 13.367983138261286 0.0 34 4.143612069513236E-4 0.0 0.0 13.649886879390502 0.0 35 4.143612069513236E-4 0.0 0.0 13.954856727706677 0.0 36 4.143612069513236E-4 0.0 0.0 14.21590428808601 0.0 37 5.524816092684315E-4 0.0 0.0 14.488277721455347 0.0 38 5.524816092684315E-4 0.0 0.0 14.805402165175426 0.0 39 5.524816092684315E-4 0.0 0.0 15.335232028463853 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCAT 25 3.889371E-5 45.0 40 GCACGTA 20 7.031555E-4 45.0 45 TCGACGT 25 3.889371E-5 45.0 26 TTCGACG 25 3.889371E-5 45.0 25 TATCGCG 25 3.889371E-5 45.0 1 TACGGCT 795 0.0 40.18868 7 ACTACGG 45 1.9266736E-8 40.0 2 CGGGTAC 40 3.4558616E-7 39.375 6 ATACCGG 40 3.4558616E-7 39.375 2 GTTTACG 35 6.2450854E-6 38.57143 1 ATTCGGC 35 6.2450854E-6 38.57143 17 ACGGCTG 915 0.0 38.114754 8 TTTACGG 65 9.094947E-12 38.07692 2 CACGACC 30 1.1395043E-4 37.500004 27 GCCGATA 30 1.1395043E-4 37.500004 9 TACTACG 30 1.1395043E-4 37.500004 1 ACGACCA 30 1.1395043E-4 37.500004 28 CGTTTTT 1440 0.0 37.1875 1 CGGTCTA 55 2.746674E-9 36.81818 31 TTACGGG 160 0.0 36.5625 3 >>END_MODULE