##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936668.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 278908 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.11140949703845 31.0 31.0 33.0 28.0 34.0 2 31.158113069542644 31.0 31.0 34.0 28.0 34.0 3 30.884614281411793 31.0 30.0 34.0 27.0 34.0 4 34.86022631118505 35.0 35.0 37.0 32.0 37.0 5 35.12493366988397 35.0 35.0 37.0 33.0 37.0 6 35.12767292440518 36.0 35.0 37.0 32.0 37.0 7 31.222940898073915 35.0 35.0 37.0 0.0 37.0 8 33.145926255252625 35.0 35.0 37.0 17.0 37.0 9 36.298209445408524 39.0 35.0 39.0 32.0 39.0 10 36.09244625467896 37.0 35.0 39.0 32.0 39.0 11 36.36517059388759 37.0 35.0 39.0 32.0 39.0 12 36.423917564214726 38.0 35.0 39.0 32.0 39.0 13 36.343625855120685 38.0 35.0 39.0 32.0 39.0 14 37.41099215511925 39.0 36.0 40.0 32.0 41.0 15 37.5761254607254 39.0 36.0 41.0 32.0 41.0 16 37.54436588409081 39.0 36.0 40.0 33.0 41.0 17 37.42244754542717 39.0 36.0 40.0 32.0 41.0 18 37.29677169532606 39.0 36.0 40.0 32.0 41.0 19 37.06671375507336 39.0 36.0 40.0 32.0 41.0 20 37.01654667488921 39.0 35.0 40.0 32.0 41.0 21 37.05687538543175 39.0 35.0 40.0 32.0 41.0 22 37.13729258393449 39.0 35.0 40.0 32.0 41.0 23 37.19066143674617 39.0 35.0 40.0 32.0 41.0 24 37.10879214651426 39.0 35.0 40.0 32.0 41.0 25 36.77840363130495 38.0 35.0 40.0 31.0 41.0 26 36.75900296872087 38.0 35.0 40.0 31.0 41.0 27 36.81144319990821 39.0 35.0 40.0 31.0 41.0 28 36.77833909389476 39.0 35.0 40.0 31.0 41.0 29 36.721686003986974 39.0 35.0 40.0 31.0 41.0 30 36.50226239476817 38.0 35.0 40.0 31.0 41.0 31 36.47533953848581 38.0 35.0 40.0 31.0 41.0 32 36.28321525377544 38.0 35.0 40.0 30.0 41.0 33 36.06376654667489 38.0 35.0 40.0 30.0 41.0 34 35.89703056204913 38.0 35.0 40.0 29.0 41.0 35 35.82470563770132 38.0 35.0 40.0 29.0 41.0 36 35.73393735568718 38.0 35.0 40.0 28.0 41.0 37 35.63106830926327 38.0 35.0 40.0 27.0 41.0 38 35.48853026804538 38.0 35.0 40.0 27.0 41.0 39 35.425713855464885 38.0 35.0 40.0 26.0 41.0 40 35.30105984769171 38.0 34.0 40.0 26.0 41.0 41 35.15626299711733 38.0 34.0 40.0 25.0 41.0 42 35.17526926441694 38.0 34.0 40.0 25.0 41.0 43 35.13233395958524 38.0 34.0 40.0 25.0 41.0 44 34.911486941930676 38.0 34.0 40.0 24.0 41.0 45 34.880738451388986 38.0 34.0 40.0 24.0 41.0 46 34.75413039425187 38.0 34.0 40.0 23.0 41.0 47 34.68119236450729 38.0 34.0 40.0 23.0 41.0 48 34.62522050281813 37.0 34.0 40.0 23.0 41.0 49 34.486561877034724 37.0 34.0 40.0 23.0 41.0 50 34.31151849355343 37.0 33.0 40.0 23.0 41.0 51 32.56483499935462 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 22.0 10 25.0 11 16.0 12 8.0 13 7.0 14 10.0 15 13.0 16 38.0 17 65.0 18 149.0 19 301.0 20 502.0 21 809.0 22 1095.0 23 1586.0 24 2297.0 25 3313.0 26 4119.0 27 4845.0 28 4914.0 29 5507.0 30 6649.0 31 8265.0 32 10563.0 33 14548.0 34 22137.0 35 24756.0 36 27307.0 37 40305.0 38 53508.0 39 41215.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.0264029715892 19.95998680568503 22.076096777431985 15.937513445293789 2 33.41101725300099 25.281454816642047 25.505543046452594 15.80198488390437 3 31.08551923931906 24.954823812870195 28.75894560213404 15.200711345676709 4 27.530583561604544 24.275388300084614 30.180202790884447 18.01382534742639 5 25.856913390795533 28.19280909834067 27.488992786151705 18.46128472471209 6 24.893871814361727 34.23530339753611 26.912100047327435 13.958724740774736 7 66.00886313766546 16.82203450600198 13.302235862721759 3.8668664936107966 8 75.98598821116641 7.108078649590547 11.99176789478968 4.914165244453368 9 69.99117988727465 7.495661651870868 14.314397579130036 8.19876088172444 10 39.90276363532061 25.116525879501484 21.376224418087688 13.604486067090225 11 29.71338219054312 25.2753596167912 27.181723005435483 17.829535187230196 12 26.065225809227417 21.5354166965451 32.317825232693224 20.081532261534267 13 22.895363345619344 24.891720567355545 34.272950220144274 17.939965866880836 14 20.14786237755819 28.164484346092618 31.83020924462547 19.857444031723723 15 18.455189524861247 25.557172974600945 37.58300228032183 18.404635220215983 16 20.836261419536193 25.626012878798743 32.58099444978272 20.956731251882342 17 21.10158188363188 24.626758644427554 31.081575286474393 23.190084185466176 18 21.934831557359416 24.545011258192666 32.74664046925868 20.77351671518924 19 22.14565376396518 26.26744302780845 30.552368522953806 21.03453468527256 20 23.745464454228635 25.189668277711647 31.20025241298206 19.86461485507766 21 23.39481119222109 27.11575143057926 30.640928191374933 18.848509185824717 22 21.401322299826468 23.533566624119782 31.459119136059204 23.60599193999455 23 19.742352316893026 26.57076885568001 31.354066573924015 22.332812253502947 24 21.834798571571987 23.178610868099874 31.85315587935807 23.13343468097007 25 19.814419091600097 28.03827785506332 29.99519554835286 22.15210750498372 26 19.001964805598977 26.447072152824585 31.433662713152728 23.11730032842371 27 19.719405682160428 26.321582744130684 31.591062285771653 22.367949287937243 28 17.998408077215426 25.800980968634818 34.2008834454372 21.99972750871255 29 19.569535474063134 25.366070532218508 31.80475282171899 23.25964117199937 30 20.490627733876405 26.509099774836148 33.110918295638704 19.889354195648746 31 21.981083367992312 24.967372753739582 31.277338764036887 21.774205114231215 32 22.650838269250077 26.168485665524116 29.24584450786639 21.934831557359416 33 23.120168657765287 24.175355314297185 29.13613091055115 23.56834511738638 34 20.61862693074419 25.152738537438868 31.920203077717385 22.30843145409956 35 19.17370602492578 24.873434967803004 30.1744661322013 25.778392875069915 36 21.570912272147087 26.35636123739728 30.5989788747544 21.473747615701235 37 20.077229767521906 25.605576032240023 31.996572346436817 22.320621853801253 38 20.777102126866207 26.084945573450746 29.075895994378076 24.062056305304974 39 21.475540321539718 24.687710642936022 29.882255080528346 23.95449395499591 40 22.407747357551592 24.358569850990293 30.22717168385274 23.006511107605377 41 19.09267572102629 24.606321797868834 29.499691654595782 26.801310826509102 42 20.226382893283805 24.336340298593086 30.232908342535893 25.20436846558722 43 21.815437348516355 24.269651641401467 28.567484618583904 25.347426391498274 44 20.31781089104651 24.644685702812396 30.193468814089236 24.84403459205186 45 20.297732585655485 24.374704203536652 29.256242201729606 26.071321009078265 46 23.474765872617496 25.236637170679938 29.132186957706484 22.156409998996086 47 19.857444031723723 23.831155793308188 33.14354554189912 23.16785463306897 48 20.174035882800062 23.952342707989732 30.579617651698772 25.294003757511437 49 19.813343468097006 22.4066717340485 33.33285527844307 24.44712951941142 50 20.19626543519727 22.942332238587635 32.643380612961984 24.218021713253115 51 19.790396833364408 23.227013925738955 29.574985299812123 27.407603941084513 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 98.0 1 246.0 2 394.0 3 2563.5 4 4733.0 5 3213.5 6 1694.0 7 1583.5 8 1473.0 9 1468.0 10 1463.0 11 1394.0 12 1325.0 13 1266.5 14 1208.0 15 1158.0 16 1108.0 17 1099.0 18 1090.0 19 978.5 20 867.0 21 914.0 22 961.0 23 1089.5 24 1218.0 25 1425.5 26 2045.0 27 2457.0 28 2851.5 29 3246.0 30 3933.0 31 4620.0 32 5321.5 33 6023.0 34 6537.5 35 7052.0 36 7956.0 37 8860.0 38 9654.5 39 10449.0 40 11398.0 41 12347.0 42 14553.0 43 16759.0 44 18399.5 45 20040.0 46 25534.5 47 31029.0 48 28621.5 49 26214.0 50 25372.0 51 24530.0 52 21174.0 53 17818.0 54 16339.5 55 14861.0 56 13661.0 57 12461.0 58 11800.0 59 11139.0 60 9943.0 61 8747.0 62 7898.0 63 7049.0 64 6040.5 65 5032.0 66 4097.0 67 3162.0 68 2755.5 69 2349.0 70 1928.0 71 1507.0 72 1189.0 73 871.0 74 677.5 75 349.0 76 214.0 77 191.0 78 168.0 79 123.5 80 79.0 81 52.5 82 26.0 83 23.5 84 21.0 85 17.5 86 14.0 87 10.0 88 6.0 89 5.5 90 5.0 91 3.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 278908.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.203939892593 #Duplication Level Percentage of deduplicated Percentage of total 1 75.01390676264181 27.157989715432596 2 9.034988770102498 6.542043807260871 3 3.7321174900588123 4.053520718465528 4 2.0249996021402947 2.932518555136479 5 1.3279983938210416 2.403938701367852 6 0.9829987792487023 2.135305723104739 7 0.7349990864695567 1.8626903923358216 8 0.6149992355970237 1.7812316287636232 9 0.4449994468949366 1.4499659904859272 >10 6.0019925399175635 43.22998477551737 >50 0.061999922938168764 1.5451822340558605 >100 0.017999977627210288 1.374299850158399 >500 9.99998757067238E-4 0.20382792825057394 >1k 0.004999993785336191 3.3274999796643425 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2587 0.9275460008318155 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGC 1956 0.7013065240150874 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCG 1840 0.6597157485622499 No Hit GAATCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTC 1677 0.6012735382276593 No Hit GCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 1131 0.4055100606651656 TruSeq Adapter, Index 22 (95% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTT 563 0.2018586774133406 No Hit CCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGC 435 0.1559654079481406 TruSeq Adapter, Index 22 (95% over 23bp) CTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCTGCT 321 0.11509171483069687 TruSeq Adapter, Index 20 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCT 318 0.11401609132760623 No Hit GAACTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTCTTCT 308 0.11043067965063749 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATTCGTCCTCGTATGCCGTC 280 0.10039152695512497 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13803834956329686 0.0 2 0.0 0.0 0.0 0.9841955053279218 0.0 3 0.0 0.0 0.0 1.2240595465171311 0.0 4 0.0 0.0 0.0 1.6578943594303497 0.0 5 0.0 0.0 0.0 3.182052863309765 0.0 6 0.0 0.0 0.0 3.9324795272993245 0.0 7 0.0 0.0 0.0 4.552038665079524 0.0 8 0.0 0.0 0.0 5.558463722804652 0.0 9 0.0 0.0 0.0 5.872545785707115 0.0 10 0.0 0.0 0.0 7.382362642878656 0.0 11 0.0 0.0 0.0 8.335006525449252 0.0 12 0.0 0.0 0.0 9.99541067305348 0.0 13 0.0 0.0 0.0 10.504539131183042 0.0 14 0.0 0.0 0.0 10.76770834827255 0.0 15 0.0 0.0 0.0 11.145969280192752 0.0 16 0.0 0.0 0.0 11.758716135786711 0.0 17 0.0 0.0 0.0 12.468269106658827 0.0 18 0.0 0.0 0.0 13.262437793107404 0.0 19 0.0 0.0 0.0 13.760092933870666 0.0 20 0.0 0.0 0.0 14.198230240796248 0.0 21 0.0 0.0 0.0 14.745005521533983 0.0 22 0.0 0.0 0.0 15.263456050023663 0.0 23 0.0 0.0 0.0 15.792304272376555 0.0 24 0.0 0.0 0.0 16.224346379451287 0.0 25 0.0 0.0 0.0 16.612646464067005 0.0 26 0.0 0.0 0.0 16.984095113800965 0.0 27 0.0 0.0 0.0 17.369526869075106 0.0 28 0.0 0.0 0.0 17.74563655398913 0.0 29 0.0 0.0 0.0 18.128558521089392 0.0 30 0.0 0.0 0.0 18.562034792834915 0.0 31 0.0 0.0 0.0 18.9650350653262 0.0 32 0.0 0.0 0.0 19.35405223227731 0.0 33 0.0 0.0 0.0 19.72801067018515 0.0 34 0.0 0.0 0.0 20.102686190428386 0.0 35 0.0 0.0 0.0 20.526123309478393 0.0 36 0.0 0.0 0.0 20.913706311758716 0.0 37 0.0 0.0 0.0 21.29877952586516 0.0 38 0.0 0.0 0.0 21.70034563368566 0.0 39 0.0 0.0 0.0 22.12700962324494 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGACG 25 3.883185E-5 45.0 1 GATACCA 20 7.0240913E-4 45.0 45 TCGCACT 20 7.0240913E-4 45.0 25 CGACGTT 20 7.0240913E-4 45.0 27 CCGGCCG 20 7.0240913E-4 45.0 32 TAGCGTG 20 7.0240913E-4 45.0 1 TCGGCTG 20 7.0240913E-4 45.0 18 CTCGGCT 20 7.0240913E-4 45.0 17 GCCCTTA 20 7.0240913E-4 45.0 21 GCGATCA 20 7.0240913E-4 45.0 9 CGATGCA 20 7.0240913E-4 45.0 10 TCGACGT 20 7.0240913E-4 45.0 26 CGTTTTT 1255 0.0 43.924305 1 ACGGGCT 45 1.9193976E-8 40.000004 5 AGCGACT 40 3.4456752E-7 39.375 19 CGACTGG 40 3.4456752E-7 39.375 2 CGTTTTA 115 0.0 39.130432 1 AACGGGA 105 0.0 38.57143 4 GCCCCAC 35 6.2312884E-6 38.571426 34 GTGGACG 35 6.2312884E-6 38.571426 26 >>END_MODULE