##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936664.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 208391 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.255778800428043 31.0 31.0 33.0 30.0 34.0 2 31.32272027102898 31.0 31.0 34.0 30.0 34.0 3 31.16415296245999 31.0 31.0 34.0 28.0 34.0 4 35.11140116415776 35.0 35.0 37.0 32.0 37.0 5 35.28151407690351 35.0 35.0 37.0 33.0 37.0 6 35.24140677860368 37.0 35.0 37.0 33.0 37.0 7 30.91459803926273 35.0 35.0 37.0 0.0 37.0 8 33.01918029089548 36.0 35.0 37.0 17.0 37.0 9 36.4545301860445 39.0 35.0 39.0 32.0 39.0 10 36.16585649092331 37.0 35.0 39.0 32.0 39.0 11 36.42896766175123 38.0 35.0 39.0 32.0 39.0 12 36.45148302949743 38.0 35.0 39.0 32.0 39.0 13 36.392027486791655 38.0 35.0 39.0 32.0 39.0 14 37.35929574693725 39.0 36.0 41.0 32.0 41.0 15 37.58647926254013 39.0 36.0 41.0 32.0 41.0 16 37.53506629364992 39.0 36.0 41.0 33.0 41.0 17 37.4958803403218 39.0 36.0 41.0 33.0 41.0 18 37.40782951279086 39.0 36.0 40.0 32.0 41.0 19 37.24593192604287 39.0 36.0 40.0 32.0 41.0 20 37.22305665791709 39.0 35.0 40.0 32.0 41.0 21 37.22376206266105 39.0 35.0 40.0 32.0 41.0 22 37.31651558848511 39.0 35.0 40.0 32.0 41.0 23 37.38314514542375 39.0 35.0 41.0 32.0 41.0 24 37.34567711657413 39.0 35.0 41.0 32.0 41.0 25 36.9928883684996 39.0 35.0 40.0 31.0 41.0 26 36.98449069297619 39.0 35.0 40.0 31.0 41.0 27 37.00373816527585 39.0 35.0 40.0 32.0 41.0 28 37.00774505616845 39.0 35.0 40.0 32.0 41.0 29 36.97611701081141 39.0 35.0 40.0 31.0 41.0 30 36.76660700318152 39.0 35.0 40.0 31.0 41.0 31 36.74289676617512 39.0 35.0 40.0 31.0 41.0 32 36.64661621663124 39.0 35.0 40.0 31.0 41.0 33 36.55326285684123 39.0 35.0 40.0 30.0 41.0 34 36.474622224568236 39.0 35.0 40.0 30.0 41.0 35 36.435940131771524 39.0 35.0 40.0 30.0 41.0 36 36.36827406173971 39.0 35.0 40.0 30.0 41.0 37 36.26079341238345 39.0 35.0 40.0 30.0 41.0 38 36.09933730343441 38.0 35.0 40.0 30.0 41.0 39 36.05312129602526 38.0 35.0 40.0 29.0 41.0 40 35.939056869058646 38.0 35.0 40.0 29.0 41.0 41 35.76056547547639 38.0 35.0 40.0 28.0 41.0 42 35.747109999952016 38.0 35.0 40.0 29.0 41.0 43 35.72246402195872 38.0 35.0 40.0 29.0 41.0 44 35.52627032837311 38.0 34.0 40.0 28.0 41.0 45 35.47239084221488 38.0 34.0 40.0 28.0 41.0 46 35.44519676953419 38.0 34.0 40.0 28.0 41.0 47 35.40496950444117 38.0 34.0 40.0 28.0 41.0 48 35.28242102586004 38.0 34.0 40.0 27.0 41.0 49 35.17687903988176 37.0 34.0 40.0 27.0 41.0 50 35.012145438142724 37.0 34.0 40.0 27.0 41.0 51 33.41160606744053 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 19.0 9 22.0 10 23.0 11 24.0 12 20.0 13 13.0 14 21.0 15 34.0 16 50.0 17 71.0 18 117.0 19 211.0 20 297.0 21 528.0 22 779.0 23 972.0 24 1302.0 25 1756.0 26 2183.0 27 2478.0 28 3019.0 29 3604.0 30 4239.0 31 5690.0 32 7710.0 33 10739.0 34 16301.0 35 17725.0 36 21314.0 37 31331.0 38 41742.0 39 34056.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.07915888881958 20.488408808441825 23.140154805149933 12.292277497588668 2 32.663598715875445 23.782696949484382 26.261690763996526 17.292013570643647 3 33.534557634446784 22.758660402800505 27.51750315512666 16.18927880762605 4 29.690821580586498 25.641702376782106 25.53949066898283 19.127985373648574 5 26.12636822127635 30.22971241560336 24.57831672193137 19.06560264118892 6 27.03811584953285 35.15650867839782 24.18098670288064 13.62438876918869 7 71.33177536457909 18.203761198900146 7.021416471920572 3.4430469646001987 8 83.8500703005408 5.779520228800668 6.828030001295642 3.54237946936288 9 78.21786929377949 6.8064359785211455 9.14098977403055 5.834704953668825 10 44.18089072944609 24.448752585284396 16.495913931023892 14.874442754245626 11 32.13238575562284 26.04767000494263 22.81000619028653 19.009938049147994 12 28.917755565259533 23.606585697079048 27.49063059345173 19.985028144209682 13 26.223781257347966 24.232332490366666 29.63563685571834 19.90824939656703 14 21.945765412133923 26.61535287032549 29.835261599589234 21.60362011795135 15 21.500448675806535 25.43296015662865 32.50428281451694 20.562308353047875 16 25.775585317983985 24.524571598581513 28.91871529960507 20.781127783829437 17 26.6038360581791 24.60902822098843 26.170516001170874 22.6166197196616 18 26.57984269954077 24.89071025140241 27.88460154229309 20.64484550676373 19 26.308717746927652 26.091337917664394 26.090378183318858 21.509566152089103 20 26.36870114352347 27.257415147487173 26.645104635037022 19.728779073952328 21 27.237740593403746 25.696887101650262 28.07990748160909 18.9854648233369 22 25.454074312230375 23.614263571843313 28.431650119246992 22.50001199667932 23 23.628179719853545 25.56636323065775 28.306404787154914 22.499052262333784 24 23.519729738808298 26.445479891166123 28.23394484406716 21.800845525958415 25 24.958371522762498 26.492027006924484 26.554409739384138 21.99519173092888 26 22.741865051753674 26.860564995609217 26.375419283942204 24.022150668694906 27 23.104164767192444 26.336070175775344 27.90523583072206 22.654529226310157 28 21.865147727109136 26.100935261119723 28.816503591805787 23.217413419965354 29 22.650690288928025 26.5692856217399 28.471479094586616 22.308544994745453 30 24.21217806911047 25.47710793652317 29.020927007404353 21.28978698696201 31 25.52509465379983 26.30056000499062 26.7674707640925 21.406874577117055 32 25.589876722123318 26.77706810754783 26.493466608442784 21.139588561886068 33 25.851884198453867 26.000643022011506 26.375419283942204 21.77205349559242 34 23.183822717871692 25.996324217456607 28.066951067944395 22.752901996727307 35 23.20925567802832 27.011243287857923 27.63699008114554 22.14251095296822 36 26.56448695001224 26.21658324975647 26.342308449021314 20.876621351209984 37 23.981361959009746 27.92443051763272 26.47667125739595 21.617536265961583 38 24.295674957171855 27.813101333550872 25.41280573537245 22.478417973904826 39 24.600870479051398 25.55820548872072 26.389815299125203 23.45110873310268 40 25.416164805581815 24.838404729570854 27.8428530982624 21.90257736658493 41 23.070094197926014 25.20886218694665 28.06551146642609 23.655532148701237 42 23.541323761582795 25.880196361647094 27.694574141877524 22.883905734892583 43 23.754384786291155 24.923821086323304 28.23586431275823 23.085929814627313 44 23.20397713912789 25.36961768982346 28.787231694267028 22.639173476781625 45 23.052818979706416 25.438238695529076 27.4911104606245 24.017831864140007 46 23.087369416145613 25.664256133902136 27.426808259473777 23.821566190478475 47 22.504810668406986 26.391254900643503 28.527143686627543 22.576790744321972 48 22.249521332495164 26.97717271859149 27.8687659255918 22.904540023321545 49 23.307148581272706 25.703605242068996 28.357270707468174 22.631975469190127 50 21.8814632109832 26.373019948078376 28.757959796728265 22.987557044210163 51 22.4213137803456 25.904189720285427 27.972897102082143 23.70159939728683 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 64.0 1 191.0 2 318.0 3 626.5 4 935.0 5 697.5 6 460.0 7 430.5 8 401.0 9 414.0 10 427.0 11 429.5 12 432.0 13 428.0 14 424.0 15 406.0 16 388.0 17 440.0 18 492.0 19 469.0 20 446.0 21 519.0 22 592.0 23 729.5 24 867.0 25 1098.5 26 1441.5 27 1553.0 28 1969.0 29 2385.0 30 2733.0 31 3081.0 32 3933.0 33 4785.0 34 5414.5 35 6044.0 36 6616.5 37 7189.0 38 7921.0 39 8653.0 40 9234.5 41 9816.0 42 10821.0 43 11826.0 44 12157.5 45 12489.0 46 14417.0 47 16345.0 48 16474.5 49 16604.0 50 16142.0 51 15680.0 52 14772.0 53 13864.0 54 12748.0 55 11632.0 56 11574.0 57 11516.0 58 11231.5 59 10947.0 60 9898.5 61 8850.0 62 8284.0 63 7718.0 64 6835.0 65 5952.0 66 5289.0 67 4626.0 68 3946.0 69 3266.0 70 2786.0 71 2306.0 72 1935.0 73 1564.0 74 1281.5 75 774.5 76 550.0 77 428.0 78 306.0 79 205.0 80 104.0 81 89.5 82 75.0 83 55.5 84 36.0 85 25.5 86 15.0 87 16.0 88 17.0 89 15.5 90 14.0 91 8.5 92 3.0 93 3.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 208391.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.137006876496585 #Duplication Level Percentage of deduplicated Percentage of total 1 68.72777655165649 26.89799463508501 2 9.370018882267834 7.334289868564381 3 4.6237033767380264 5.428737325508299 4 2.9831530935040096 4.6700673253643386 5 2.2499325633291645 4.4027813101333555 6 1.8440864170283726 4.3303213670456016 7 1.6405502832340175 4.494435940131772 8 1.4701194242134432 4.602885921177018 9 1.2347041369332254 4.349036186783498 >10 5.8228499963216365 31.67747167584013 >50 0.019617940606684814 0.5571257875819974 >100 0.013487334167095808 1.2548526567846021 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 434 0.20826235298069495 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTC 373 0.17899045544193368 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGC 372 0.1785105882691671 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCG 328 0.15739643266743766 No Hit GCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGC 238 0.11420838711844561 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 221 0.10605064518141379 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05038605314049071 0.0 2 0.0 0.0 0.0 0.2845612334505809 0.0 3 0.0 0.0 0.0 0.36901785585749863 0.0 4 0.0 0.0 0.0 0.5628841936551963 0.0 5 0.0 0.0 0.0 1.0513889755315728 0.0 6 0.0 0.0 0.0 1.3796181217039123 0.0 7 0.0 0.0 0.0 1.6569813475629946 0.0 8 0.0 0.0 0.0 2.0792644595975833 0.0 9 0.0 0.0 0.0 2.2673723913220822 0.0 10 0.0 0.0 0.0 2.802424288956817 0.0 11 0.0 0.0 0.0 3.219428862090973 0.0 12 0.0 0.0 0.0 3.804386945693432 0.0 13 0.0 0.0 0.0 4.03328358710309 0.0 14 0.0 0.0 0.0 4.140293966630037 0.0 15 0.0 0.0 0.0 4.298650133643007 0.0 16 0.0 0.0 0.0 4.542902524581196 0.0 17 0.0 0.0 0.0 4.8183462817492115 0.0 18 0.0 0.0 0.0 5.156172771376883 0.0 19 0.0 0.0 0.0 5.369233796085243 0.0 20 0.0 0.0 0.0 5.562140399537408 0.0 21 0.0 0.0 0.0 5.813110930894329 0.0 22 0.0 0.0 0.0 6.045846509686119 0.0 23 0.0 0.0 0.0 6.266105541985978 0.0 24 0.0 0.0 0.0 6.475807496484973 0.0 25 0.0 0.0 0.0 6.6480798115081745 0.0 26 0.0 0.0 0.0 6.844825352342472 0.0 27 0.0 0.0 0.0 7.060765580087431 0.0 28 0.0 0.0 0.0 7.25175271484853 0.0 29 0.0 0.0 0.0 7.473931215839456 0.0 30 0.0 0.0 0.0 7.751294441698538 0.0 31 0.0 0.0 0.0 7.978751481589896 0.0 32 0.0 0.0 0.0 8.19709104519869 0.0 33 0.0 0.0 0.0 8.419269546189614 0.0 34 0.0 0.0 0.0 8.660162866918437 0.0 35 0.0 0.0 0.0 8.900096453301726 0.0 36 0.0 0.0 0.0 9.117476282564986 0.0 37 0.0 0.0 0.0 9.350211861356776 0.0 38 0.0 0.0 0.0 9.653008047372488 0.0 39 0.0 0.0 0.0 10.173184062651458 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACGGG 30 2.1569213E-6 45.000004 3 CACAACG 30 2.1569213E-6 45.000004 12 GTTGATC 40 6.7684596E-9 45.0 16 TACGGGC 35 1.2055352E-7 45.0 4 TAGCCGG 20 7.019982E-4 45.0 2 GTTCGTT 20 7.019982E-4 45.0 23 CTGTTAG 40 6.7684596E-9 45.0 2 GCGATTT 20 7.019982E-4 45.0 9 ACGCTGG 20 7.019982E-4 45.0 2 CGGTCTA 20 7.019982E-4 45.0 31 CGTCATA 20 7.019982E-4 45.0 38 TACACGG 20 7.019982E-4 45.0 2 ACACGGG 55 6.002665E-11 40.909092 3 TGATCCG 40 3.4400728E-7 39.375 14 GCGAATG 35 6.2236977E-6 38.571426 1 GTCTCAC 35 6.2236977E-6 38.571426 22 TCGATCA 35 6.2236977E-6 38.571426 17 CTACGAA 35 6.2236977E-6 38.571426 11 CATACGA 35 6.2236977E-6 38.571426 18 ATTGCGG 35 6.2236977E-6 38.571426 2 >>END_MODULE