##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936659.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 541916 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2152713704707 31.0 31.0 33.0 28.0 34.0 2 31.245659843961057 31.0 31.0 34.0 28.0 34.0 3 31.048282390628806 31.0 31.0 34.0 28.0 34.0 4 35.02062496770717 35.0 35.0 37.0 32.0 37.0 5 35.238618162224405 35.0 35.0 37.0 33.0 37.0 6 35.21079281659888 37.0 35.0 37.0 33.0 37.0 7 30.899327571062674 35.0 35.0 37.0 0.0 37.0 8 33.027037400630356 36.0 35.0 37.0 17.0 37.0 9 36.407465363635694 39.0 35.0 39.0 32.0 39.0 10 36.17385904826578 37.0 35.0 39.0 32.0 39.0 11 36.39664080780047 38.0 35.0 39.0 32.0 39.0 12 36.43517814569048 38.0 35.0 39.0 32.0 39.0 13 36.397474885406595 39.0 35.0 39.0 32.0 39.0 14 37.46289646365857 39.0 36.0 41.0 32.0 41.0 15 37.68151152577152 39.0 36.0 41.0 33.0 41.0 16 37.581007019538085 39.0 36.0 41.0 33.0 41.0 17 37.49378501465172 39.0 36.0 41.0 32.0 41.0 18 37.41297913329741 39.0 36.0 40.0 32.0 41.0 19 37.236435167073864 39.0 36.0 40.0 32.0 41.0 20 37.23579300112932 39.0 35.0 40.0 32.0 41.0 21 37.213857867270946 39.0 35.0 40.0 32.0 41.0 22 37.287134906516876 39.0 35.0 40.0 32.0 41.0 23 37.35013729065021 39.0 35.0 41.0 32.0 41.0 24 37.288461680408034 39.0 35.0 41.0 32.0 41.0 25 36.957194472944146 39.0 35.0 40.0 31.0 41.0 26 36.91749643856243 39.0 35.0 40.0 31.0 41.0 27 36.938134323400675 39.0 35.0 40.0 31.0 41.0 28 36.94317938573506 39.0 35.0 40.0 31.0 41.0 29 36.94565393898685 39.0 35.0 40.0 31.0 41.0 30 36.72403472124831 39.0 35.0 40.0 31.0 41.0 31 36.72123539441537 39.0 35.0 40.0 31.0 41.0 32 36.580065914274535 39.0 35.0 40.0 31.0 41.0 33 36.45570346695798 39.0 35.0 40.0 30.0 41.0 34 36.36625971552787 39.0 35.0 40.0 30.0 41.0 35 36.29975125296171 39.0 35.0 40.0 30.0 41.0 36 36.257543604543876 39.0 35.0 40.0 30.0 41.0 37 36.20088168646063 39.0 35.0 40.0 30.0 41.0 38 36.10734320448188 38.0 35.0 40.0 30.0 41.0 39 36.05408218247847 38.0 35.0 40.0 30.0 41.0 40 35.965180950553226 38.0 35.0 40.0 29.0 41.0 41 35.819780187335304 38.0 35.0 40.0 29.0 41.0 42 35.82233408867795 38.0 35.0 40.0 29.0 41.0 43 35.777334494644926 38.0 35.0 40.0 29.0 41.0 44 35.59481358734564 38.0 35.0 40.0 28.0 41.0 45 35.53111921404793 38.0 34.0 40.0 28.0 41.0 46 35.44652861329062 38.0 34.0 40.0 28.0 41.0 47 35.42278508108268 38.0 34.0 40.0 28.0 41.0 48 35.334354401789206 38.0 34.0 40.0 27.0 41.0 49 35.199931354674895 38.0 34.0 40.0 27.0 41.0 50 35.06255397515482 37.0 34.0 40.0 27.0 41.0 51 33.48248621557585 36.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 18.0 9 52.0 10 61.0 11 43.0 12 27.0 13 29.0 14 21.0 15 50.0 16 87.0 17 165.0 18 283.0 19 462.0 20 797.0 21 1174.0 22 1796.0 23 2428.0 24 3451.0 25 4751.0 26 6174.0 27 7031.0 28 8280.0 29 9725.0 30 11691.0 31 14576.0 32 19228.0 33 27623.0 34 43723.0 35 46662.0 36 53607.0 37 80935.0 38 108049.0 39 88909.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.66881952184471 20.839761143793503 23.753312321466797 13.738107012894988 2 32.466101757467946 23.88303722348113 25.752884210837102 17.89797680821382 3 34.0903387240827 22.937318698838936 27.09478959838794 15.877552978690424 4 30.868437174765095 25.151684024830416 24.933199979332592 19.0466788210719 5 25.025280670805067 30.881723366721044 24.821743591257686 19.271252371216203 6 26.144642343093764 36.428523977885874 23.88451346703179 13.542320211988573 7 69.97671225798832 18.562470936455096 7.903623439795098 3.557193365761483 8 81.49196554447553 5.961440518456735 8.546158445220293 4.000435491847445 9 74.85274470582156 8.825722067626716 10.809608869271251 5.511924357280464 10 42.58944190612567 26.01141136264661 17.669159057861368 13.72998767336635 11 33.68012754744278 26.293373880822855 22.638194849386252 17.388303722348113 12 31.666715874785023 22.85815513843474 26.708198318558594 18.766930668221644 13 26.752301094634596 24.106134530074772 28.096605377955253 21.04495899733538 14 21.214727005661395 28.447397751681073 28.13498771027244 22.202887532385095 15 20.983325829095286 26.74067567667314 32.64491175754176 19.631086736689817 16 24.671904870865596 24.469290443537375 31.696425276242074 19.162379409354955 17 23.704596284294983 24.513577750057205 28.509584511252665 23.272241454395147 18 24.613408720170654 26.654684489847135 28.17724518191011 20.5546616080721 19 26.762819329933052 27.515519010326322 25.665232250016608 20.056429409724018 20 28.55645524398615 26.12951084669949 26.47864244643081 18.835391462883546 21 26.900848101919856 26.271968349338277 27.167494593257995 19.659688955483876 22 23.640933281172728 25.27568848308594 27.724961064076354 23.358417171664982 23 24.950361310609022 25.920806914724793 27.737324603813136 21.391507170853046 24 24.6442253042907 24.68980432391736 29.034389093512647 21.631581278279292 25 24.623926955469113 24.995571269348016 27.052532126750272 23.327969648432596 26 22.7730866038279 27.603170971146817 27.66443507849925 21.959307346526032 27 23.908686955173863 27.541722333350556 27.6946980712878 20.854892640187778 28 21.567918275157037 28.00526280825811 29.558455553997298 20.868363362587562 29 23.71345374559895 27.915581012555453 27.72053233342437 20.65043290842123 30 23.863846057322537 26.266247905579466 28.2840883088892 21.585817728208802 31 25.081931517061683 26.246134087201707 26.435462322573976 22.23647207316263 32 25.282331579063914 27.529543324057602 26.213656729087166 20.974468367791317 33 24.709180020519785 27.813904738003675 25.935753880675232 21.541161360801304 34 22.766628038293756 27.926468308741576 27.55685382974483 21.750049823219836 35 23.209685633935887 26.936462477579553 26.758944190612567 23.094907697871996 36 23.238287852729943 30.037681116630623 25.542704035311747 21.18132699532769 37 23.51139290960223 29.576724067936727 25.676857667978066 21.235025354482985 38 23.27943814170462 28.450350238782395 24.48718989658914 23.78302172292385 39 23.70164379719366 27.03001941260269 25.64862451007167 23.619712280131978 40 23.499398430753104 26.103492054119087 27.83531026948826 22.56179924563955 41 20.725167738173443 28.213413148901306 27.47787479978447 23.58354431314078 42 22.473224632599887 28.12077886609733 25.96620140390762 23.43979509739517 43 23.416359731028425 26.462403767373544 26.884793953306417 23.236442548291617 44 22.52212520021553 26.641213767447354 26.605230330899992 24.231430701437123 45 22.72732305375741 26.762450269045384 25.992035666044185 24.51819101115302 46 22.0801747872364 28.2065855224795 26.26550978380413 23.44772990647997 47 22.0881095963212 27.29721949527233 27.690638401523483 22.924032506882984 48 22.037363724267227 25.973951682548584 28.043091549243794 23.945593043940388 49 22.143099668583325 26.482886646638963 28.0323887835015 23.341624901276212 50 20.565548904258225 25.86286435536135 28.665512736291234 24.906074004089195 51 19.88703046228567 26.278611445316248 27.24924157987585 26.585116512522234 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 244.0 1 768.0 2 1292.0 3 2962.0 4 4632.0 5 3237.5 6 1843.0 7 1774.0 8 1705.0 9 1659.5 10 1614.0 11 1603.5 12 1593.0 13 1519.0 14 1445.0 15 1441.0 16 1437.0 17 1527.5 18 1618.0 19 1588.0 20 1558.0 21 1790.5 22 2023.0 23 2139.0 24 2255.0 25 2975.0 26 4289.0 27 4883.0 28 5830.5 29 6778.0 30 8044.0 31 9310.0 32 10206.0 33 11102.0 34 12838.5 35 14575.0 36 15178.0 37 15781.0 38 17958.5 39 20136.0 40 22473.0 41 24810.0 42 27171.5 43 29533.0 44 32421.0 45 35309.0 46 37553.5 47 39798.0 48 41510.5 49 43223.0 50 42580.5 51 41938.0 52 38522.0 53 35106.0 54 32906.5 55 30707.0 56 30174.0 57 29641.0 58 29065.0 59 28489.0 60 28923.5 61 29358.0 62 26036.5 63 22715.0 64 18580.0 65 14445.0 66 11887.0 67 9329.0 68 7708.0 69 6087.0 70 5235.0 71 4383.0 72 3699.0 73 3015.0 74 2500.0 75 1514.0 76 1043.0 77 773.5 78 504.0 79 428.5 80 353.0 81 280.5 82 208.0 83 173.5 84 139.0 85 127.0 86 115.0 87 99.0 88 83.0 89 69.0 90 55.0 91 36.0 92 17.0 93 12.5 94 8.0 95 4.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 541916.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.16211030309061 #Duplication Level Percentage of deduplicated Percentage of total 1 73.19051807152066 22.807709972850734 2 8.748157306775761 5.452220858850687 3 3.615755428670097 3.380237084916487 4 2.190403738479813 2.730304116272399 5 1.5476124453293545 2.4113434863894563 6 1.1683639994861288 2.1845212695688105 7 0.8943661510983785 1.9509235656314794 8 0.6786948251533155 1.6919650402851527 9 0.567439647075874 1.5914355185272673 >10 7.167112327089735 49.46547648941753 >50 0.19790300987887824 3.7834547491572716 >100 0.03131002842859864 1.8114633481757272 >500 0.0017722657601093568 0.3554812728991188 >1k 5.907552533697856E-4 0.38346322705793084 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2083 0.38437691450335476 No Hit GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 750 0.13839783287446764 No Hit GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 612 0.11293263162556559 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 569 0.10499782254076277 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08063980395485647 0.0 2 0.0 0.0 0.0 0.4026454284427845 0.0 3 0.0 0.0 0.0 0.5118874511916977 0.0 4 0.0 0.0 0.0 0.6715062851069169 0.0 5 0.0 0.0 0.0 1.149809195521077 0.0 6 0.0 0.0 0.0 1.4867617859594475 0.0 7 0.0 0.0 0.0 1.7792425394341558 0.0 8 0.0 0.0 0.0 2.395574221835118 0.0 9 0.0 0.0 0.0 2.619778711091756 0.0 10 0.0 0.0 0.0 3.138309258261428 0.0 11 0.0 0.0 0.0 3.8046486909410313 0.0 12 0.0 0.0 0.0 4.372633397057847 0.0 13 0.0 0.0 0.0 4.612338443596425 0.0 14 0.0 0.0 0.0 4.713830187704367 0.0 15 0.0 0.0 0.0 4.898545161980824 0.0 16 0.0 0.0 0.0 5.3039585470810975 0.0 17 0.0 0.0 0.0 5.742402881627411 0.0 18 0.0 0.0 0.0 6.2720052554270405 0.0 19 0.0 0.0 0.0 6.55895009558677 0.0 20 1.845304438326235E-4 0.0 0.0 6.891843016260823 0.0 21 1.845304438326235E-4 0.0 0.0 7.248724894633116 0.0 22 1.845304438326235E-4 0.0 0.0 7.655245462396386 0.0 23 1.845304438326235E-4 0.0 0.0 8.039068785568244 0.0 24 1.845304438326235E-4 0.0 0.0 8.354800374965862 0.0 25 1.845304438326235E-4 0.0 0.0 8.62975073627647 0.0 26 1.845304438326235E-4 0.0 0.0 8.90045689737893 0.0 27 1.845304438326235E-4 0.0 0.0 9.151602831435131 0.0 28 1.845304438326235E-4 0.0 0.0 9.443529993578341 0.0 29 1.845304438326235E-4 0.0 0.0 9.725123450866924 0.0 30 1.845304438326235E-4 0.0 0.0 10.059308084647805 0.0 31 1.845304438326235E-4 0.0 0.0 10.373563430494762 0.0 32 1.845304438326235E-4 0.0 0.0 10.701474029185334 0.0 33 1.845304438326235E-4 0.0 0.0 11.024955897223924 0.0 34 1.845304438326235E-4 0.0 0.0 11.327401294665593 0.0 35 1.845304438326235E-4 0.0 0.0 11.64996051048502 0.0 36 3.69060887665247E-4 0.0 0.0 11.989311996693214 0.0 37 3.69060887665247E-4 0.0 0.0 12.307996073192156 0.0 38 3.69060887665247E-4 0.0 0.0 12.653990655378324 0.0 39 3.69060887665247E-4 0.0 0.0 13.008289107536962 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTCGC 20 7.0299814E-4 45.000004 31 AACGGTT 20 7.0299814E-4 45.000004 18 CATAGCG 20 7.0299814E-4 45.000004 34 ATACGGT 20 7.0299814E-4 45.000004 41 CGCCGTT 20 7.0299814E-4 45.000004 15 CACTTCG 20 7.0299814E-4 45.000004 1 GTACGGA 20 7.0299814E-4 45.000004 18 TCCGCAA 25 3.888068E-5 45.0 30 TACGATT 25 3.888068E-5 45.0 13 TTACGAT 25 3.888068E-5 45.0 12 CCTCGTC 30 2.1633696E-6 44.999996 36 CGTTTTT 1220 0.0 40.389343 1 AACGGGC 45 1.9250365E-8 40.0 4 AACACGG 45 1.9250365E-8 40.0 2 TAGACGG 85 0.0 39.705883 2 CTCACGT 35 6.2421786E-6 38.57143 45 ACCGGGT 35 6.2421786E-6 38.57143 4 TTTACGA 35 6.2421786E-6 38.57143 11 CAACGCT 35 6.2421786E-6 38.57143 22 ACGATTT 35 6.2421786E-6 38.57143 14 >>END_MODULE