##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936657.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 212783 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.10578852633904 31.0 31.0 33.0 28.0 34.0 2 31.145552041281494 31.0 31.0 34.0 28.0 34.0 3 30.870135302162296 31.0 31.0 34.0 27.0 34.0 4 34.81611312933834 35.0 35.0 37.0 32.0 37.0 5 35.12320063162941 35.0 35.0 37.0 33.0 37.0 6 35.1247233096629 36.0 35.0 37.0 32.0 37.0 7 30.95506689914138 35.0 35.0 37.0 0.0 37.0 8 33.040228777674905 35.0 35.0 37.0 17.0 37.0 9 36.25570651790792 39.0 35.0 39.0 32.0 39.0 10 36.17398946344398 37.0 35.0 39.0 32.0 39.0 11 36.41924401855412 38.0 35.0 39.0 32.0 39.0 12 36.3931094119361 38.0 35.0 39.0 32.0 39.0 13 36.20765286700535 38.0 35.0 39.0 32.0 39.0 14 37.26120507747329 39.0 36.0 40.0 32.0 41.0 15 37.517367458866545 39.0 36.0 41.0 32.0 41.0 16 37.46843497835823 39.0 36.0 41.0 32.0 41.0 17 37.35053552210468 39.0 35.0 40.0 32.0 41.0 18 37.22523415874389 39.0 36.0 40.0 32.0 41.0 19 36.943642114266645 38.0 35.0 40.0 32.0 41.0 20 36.841542792422324 38.0 35.0 40.0 32.0 41.0 21 36.8640492896519 38.0 35.0 40.0 32.0 41.0 22 36.90432036393885 38.0 35.0 40.0 32.0 41.0 23 36.97758279561807 39.0 35.0 40.0 32.0 41.0 24 36.876940357077395 38.0 35.0 40.0 32.0 41.0 25 36.593694045106986 38.0 35.0 40.0 31.0 41.0 26 36.52490565505703 38.0 35.0 40.0 31.0 41.0 27 36.535879276069984 38.0 35.0 40.0 31.0 41.0 28 36.463537970608556 38.0 35.0 40.0 31.0 41.0 29 36.45825089410338 38.0 35.0 40.0 31.0 41.0 30 36.23031915143597 38.0 35.0 40.0 30.0 41.0 31 36.06972831476199 38.0 35.0 40.0 30.0 41.0 32 35.772472424958764 38.0 35.0 40.0 29.0 41.0 33 35.5302867240334 38.0 35.0 40.0 27.0 41.0 34 35.338758265462936 38.0 34.0 40.0 26.0 41.0 35 35.19549494085524 38.0 34.0 40.0 25.0 41.0 36 35.0609165205867 38.0 34.0 40.0 24.0 41.0 37 34.914104980191084 38.0 34.0 40.0 24.0 41.0 38 34.75350474426998 38.0 34.0 40.0 23.0 41.0 39 34.78352593957224 38.0 34.0 40.0 23.0 41.0 40 34.662844306171074 38.0 34.0 40.0 23.0 41.0 41 34.507319663694936 38.0 34.0 40.0 23.0 41.0 42 34.45102287306787 38.0 34.0 40.0 23.0 41.0 43 34.42025443761955 37.0 34.0 40.0 23.0 41.0 44 34.16640897064145 37.0 33.0 40.0 22.0 41.0 45 34.1247938040163 37.0 33.0 40.0 22.0 41.0 46 33.9981483483173 37.0 33.0 40.0 21.0 41.0 47 33.92470263131923 37.0 33.0 40.0 21.0 41.0 48 33.85950005404567 37.0 33.0 40.0 20.0 41.0 49 33.736304122039826 36.0 33.0 40.0 20.0 41.0 50 33.59681929477449 36.0 33.0 40.0 20.0 41.0 51 31.93057246114586 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 10.0 10 21.0 11 10.0 12 5.0 13 11.0 14 7.0 15 19.0 16 32.0 17 69.0 18 118.0 19 245.0 20 433.0 21 702.0 22 1003.0 23 1494.0 24 2149.0 25 3079.0 26 4083.0 27 4532.0 28 4582.0 29 4756.0 30 5327.0 31 6604.0 32 8538.0 33 11512.0 34 18240.0 35 19923.0 36 20012.0 37 29230.0 38 37039.0 39 28986.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.80338184911389 19.672624222799755 22.18269316627738 19.34130076180898 2 34.99856661481415 24.955001104411537 23.693622140866516 16.352810139907795 3 30.2213992659188 22.549733766325318 30.97192914847521 16.256937819280676 4 27.837280233853267 24.092620181123493 30.1875619762857 17.88253760873754 5 25.024085570745786 28.38619626567912 28.543163692588223 18.046554470986877 6 23.438902543906234 34.834079790208804 28.780964644731956 12.946053021153006 7 63.92568955226686 18.16169524821062 14.33056212197403 3.5820530775484882 8 74.45096647758514 6.9154960687648925 14.058453917841183 4.575083535808782 9 68.14360169750402 7.761898271948417 16.368788860012312 7.725711170535241 10 39.96277898140359 23.787144649713557 23.191232382286177 13.058843986596674 11 31.791543497365858 24.537674532269964 27.036934341559242 16.633847628804933 12 29.76130611937984 20.665654681060047 32.04814294375021 17.52489625580991 13 22.81244272333786 27.04210392747541 32.964099575624 17.181353773562737 14 17.961021322192092 30.42489296607342 32.08855970636752 19.52552600536697 15 17.68327356978706 24.324311622639026 39.742836598788436 18.24957820878548 16 18.875568066997833 23.947871775470787 36.68103184934887 20.495528308182514 17 20.0584633170883 23.21003087652679 33.1088479812767 23.62265782510821 18 21.837270834606148 24.063482515050545 33.58069018671605 20.518556463627263 19 23.973719705051625 25.406164966186207 30.22844870125903 20.391666627503138 20 24.676313427294474 23.922023845889946 32.26855528872137 19.133107438094207 21 23.271125982808776 26.011946443089904 31.703190574434988 19.013736999666328 22 20.737088959174372 23.70631112447893 31.60637832909584 23.950221587250862 23 20.196162287400778 26.61349825878947 30.951720767166552 22.2386186866432 24 20.511037065931017 23.96714023206741 33.94867071147601 21.573151990525556 25 19.618578551857997 25.64114614419385 32.61585746981667 22.124417834131485 26 19.660875163899373 26.730048923081263 31.57724066302289 22.031835249996476 27 21.29305442634045 25.911844461258653 32.4969569937448 20.298144118656094 28 17.93235361847516 25.644905843041972 35.998176546058666 20.424563992424208 29 20.780325495927777 23.65367534060522 32.604578373272304 22.961420790194705 30 21.47164012162626 24.913174454726175 32.943891194315334 20.67129422933223 31 24.644355987085433 25.136406573833437 29.400844992316117 20.818392446765014 32 23.779625252017315 26.3376303558085 29.248107226611147 20.63463716556304 33 22.39417622648426 25.411804514458392 29.780574575976466 22.413444683080886 34 22.530935272084708 25.520365818697922 30.3966952247125 21.55200368450487 35 22.612708722031368 25.166484164618414 29.34021984839014 22.880587264960077 36 25.709760648172082 26.295803706123138 29.133436411743418 18.86099923396136 37 21.92891349402913 28.368337696150537 29.859998214143047 19.842750595677288 38 19.440462818928204 28.813862009653025 29.31672173058938 22.42895344082939 39 22.43600287616962 25.837590409008236 29.741097738071183 21.98530897675096 40 23.256557149772302 26.220609729160692 30.513715851360306 20.009117269706696 41 21.11399876869863 26.461700417796536 28.83360042860567 23.59070038489917 42 21.703801525497806 26.19241198779978 29.842609606970484 22.261176879731934 43 23.26360658511253 24.91505430415024 29.110878218654683 22.710460892082544 44 21.372008102151018 26.108758688429056 29.377346874515354 23.141886334904573 45 21.608399167226704 25.946151713247765 27.845739556261545 24.599709563263982 46 22.75369742883595 26.824511356640336 28.733968409130426 21.68782280539329 47 20.688682836504796 26.074921398795958 31.959790020819334 21.276605743879916 48 21.65163570398011 25.13781646090148 30.368497483351582 22.842050351766822 49 20.731449410902187 23.91356452348167 32.900184695205915 22.45480137041023 50 20.923194052156422 24.55224336530644 31.95415047254715 22.57041210998999 51 20.20791134630116 24.370367933528524 29.16445392724043 26.257266792929883 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 110.0 1 295.5 2 481.0 3 2980.0 4 5479.0 5 3740.0 6 2001.0 7 1843.5 8 1686.0 9 1621.5 10 1557.0 11 1528.0 12 1499.0 13 1399.0 14 1299.0 15 1237.5 16 1176.0 17 1046.0 18 916.0 19 905.0 20 894.0 21 997.5 22 1101.0 23 1097.0 24 1093.0 25 1343.0 26 1580.0 27 1567.0 28 1973.0 29 2379.0 30 2962.5 31 3546.0 32 3755.0 33 3964.0 34 4513.0 35 5062.0 36 5323.0 37 5584.0 38 6044.5 39 6505.0 40 8076.5 41 9648.0 42 11130.0 43 12612.0 44 13860.5 45 15109.0 46 17880.0 47 20651.0 48 20151.5 49 19652.0 50 18585.5 51 17519.0 52 15402.0 53 13285.0 54 12176.0 55 11067.0 56 10139.0 57 9211.0 58 8505.0 59 7799.0 60 7569.0 61 7339.0 62 6793.0 63 6247.0 64 5313.5 65 4380.0 66 3631.0 67 2882.0 68 2335.0 69 1788.0 70 1733.5 71 1679.0 72 1315.0 73 951.0 74 797.0 75 522.0 76 401.0 77 316.5 78 232.0 79 162.5 80 93.0 81 76.0 82 59.0 83 43.0 84 27.0 85 18.5 86 10.0 87 7.0 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 212783.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.6905109900697 #Duplication Level Percentage of deduplicated Percentage of total 1 76.76654322373096 28.933702410436922 2 8.46519283282834 6.381148869975515 3 3.4900684547188865 3.946273903460333 4 1.884063392311625 2.8404524797563715 5 1.2568735271013356 2.368610274317027 6 0.8753226349455729 1.9794814435363728 7 0.6346712552525593 1.6744758744824542 8 0.5436476764049427 1.6392286977813075 9 0.44264891083429964 1.5015297274688297 >10 5.528747241237422 41.835578970124494 >50 0.07481390042269855 1.8446022473599863 >100 0.03241935684983603 2.3869388062016235 >500 0.0037406950211349268 1.2021637066870945 >1k 0.001246898340378309 1.4658125884116682 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3119 1.4658125884116682 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCG 908 0.42672581926187714 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGC 828 0.38912883078065447 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC 822 0.3863090566445628 No Hit GCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 482 0.2265218555993665 No Hit CCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 482 0.2265218555993665 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 480 0.2255819308873359 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 304 0.14286855622864608 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 264 0.12407006198803475 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 260 0.12219021256397362 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 245 0.11514077722374438 No Hit CTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGCT 222 0.10433164303539286 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.6996235601528316E-4 0.0 0.0 0.12547994905608062 0.0 2 4.6996235601528316E-4 0.0 0.0 0.8125649135504246 0.0 3 4.6996235601528316E-4 0.0 0.0 1.007129328940752 0.0 4 4.6996235601528316E-4 0.0 0.0 1.3638307571563517 0.0 5 4.6996235601528316E-4 0.0 0.0 2.520878077665979 0.0 6 4.6996235601528316E-4 0.0 0.0 3.0660344106437076 0.0 7 4.6996235601528316E-4 0.0 0.0 3.6572470545109335 0.0 8 4.6996235601528316E-4 0.0 0.0 4.6648463458077005 0.0 9 4.6996235601528316E-4 0.0 0.0 5.057264913080462 0.0 10 4.6996235601528316E-4 0.0 0.0 6.342611956782262 0.0 11 4.6996235601528316E-4 0.0 0.0 7.386398349492206 0.0 12 4.6996235601528316E-4 0.0 0.0 8.69430358628274 0.0 13 4.6996235601528316E-4 0.0 0.0 9.074973094655117 0.0 14 4.6996235601528316E-4 0.0 0.0 9.224421123867979 0.0 15 4.6996235601528316E-4 0.0 0.0 9.55997424606289 0.0 16 4.6996235601528316E-4 0.0 0.0 10.201942824379767 0.0 17 4.6996235601528316E-4 0.0 0.0 10.906886358402692 0.0 18 4.6996235601528316E-4 0.0 0.0 11.781486302947133 0.0 19 4.6996235601528316E-4 0.0 0.0 12.190823515036445 0.0 20 4.6996235601528316E-4 0.0 0.0 12.63869764031901 0.0 21 4.6996235601528316E-4 0.0 0.0 13.148136834239578 0.0 22 4.6996235601528316E-4 0.0 0.0 13.650526592819915 0.0 23 4.6996235601528316E-4 0.0 0.0 14.135527744227687 0.0 24 4.6996235601528316E-4 0.0 0.0 14.54580488102903 0.0 25 4.6996235601528316E-4 0.0 0.0 14.911905556364935 0.0 26 4.6996235601528316E-4 0.0 0.0 15.26014766217226 0.0 27 4.6996235601528316E-4 0.0 0.0 15.606979880911538 0.0 28 4.6996235601528316E-4 0.0 0.0 15.938773304258328 0.0 29 4.6996235601528316E-4 0.0 0.0 16.270566727605118 0.0 30 4.6996235601528316E-4 0.0 0.0 16.703402057495193 0.0 31 4.6996235601528316E-4 0.0 0.0 17.100990210684124 0.0 32 4.6996235601528316E-4 0.0 0.0 17.55356395952684 0.0 33 4.6996235601528316E-4 0.0 0.0 17.919194672506734 0.0 34 4.6996235601528316E-4 0.0 0.0 18.24910824642946 0.0 35 4.6996235601528316E-4 0.0 0.0 18.650926060822528 0.0 36 4.6996235601528316E-4 0.0 0.0 19.033945380974984 0.0 37 4.6996235601528316E-4 0.0 0.0 19.39487647039472 0.0 38 4.6996235601528316E-4 0.0 0.0 19.77272620463101 0.0 39 4.6996235601528316E-4 0.0 0.0 20.14211661645902 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAT 20 7.020316E-4 45.000004 16 CGGAACG 20 7.020316E-4 45.000004 42 ATTAGCG 20 7.020316E-4 45.000004 13 CGCGGAA 20 7.020316E-4 45.000004 40 TTAGCGT 20 7.020316E-4 45.000004 14 GCGCGCC 20 7.020316E-4 45.000004 16 CCGTGGT 20 7.020316E-4 45.000004 38 ATTAACG 20 7.020316E-4 45.000004 1 CACGACC 30 2.1571395E-6 45.000004 27 TCGATTT 20 7.020316E-4 45.000004 15 GAATAAC 20 7.020316E-4 45.000004 9 TAACGCC 20 7.020316E-4 45.000004 12 ACGGGTC 30 2.1571395E-6 45.000004 5 GACCCAC 20 7.020316E-4 45.000004 12 AGAACCG 20 7.020316E-4 45.000004 2 ACGATGG 30 2.1571395E-6 45.000004 2 ACGATCT 20 7.020316E-4 45.000004 16 CCATCGA 20 7.020316E-4 45.000004 31 CGTAGGT 30 2.1571395E-6 45.000004 3 AGACCTA 20 7.020316E-4 45.000004 32 >>END_MODULE