##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936655.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 229283 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.01900271716612 31.0 31.0 33.0 28.0 34.0 2 31.055795676085886 31.0 31.0 34.0 28.0 34.0 3 30.72099981245884 31.0 30.0 34.0 27.0 34.0 4 34.71407387377172 35.0 35.0 37.0 32.0 37.0 5 35.06401259578774 35.0 35.0 37.0 33.0 37.0 6 35.07233855104827 35.0 35.0 37.0 32.0 37.0 7 31.253769359263444 35.0 35.0 37.0 0.0 37.0 8 33.191148057204416 36.0 35.0 37.0 17.0 37.0 9 36.368583802549686 39.0 35.0 39.0 32.0 39.0 10 36.171255609879495 37.0 35.0 39.0 32.0 39.0 11 36.42196761207765 38.0 35.0 39.0 32.0 39.0 12 36.37378261798738 38.0 35.0 39.0 32.0 39.0 13 36.149343824007886 38.0 35.0 39.0 32.0 39.0 14 37.19463719508206 39.0 36.0 40.0 32.0 41.0 15 37.464378082980424 39.0 36.0 41.0 32.0 41.0 16 37.45220535320979 39.0 36.0 41.0 32.0 41.0 17 37.3707906822573 39.0 36.0 40.0 32.0 41.0 18 37.214429329693 39.0 36.0 40.0 32.0 41.0 19 36.93026521809293 38.0 35.0 40.0 32.0 41.0 20 36.79701940396802 38.0 35.0 40.0 32.0 41.0 21 36.783656005896646 38.0 35.0 40.0 32.0 41.0 22 36.82750574617394 38.0 35.0 40.0 32.0 41.0 23 36.90639079216514 38.0 35.0 40.0 32.0 41.0 24 36.7858672470266 38.0 35.0 40.0 32.0 41.0 25 36.462712019643845 38.0 35.0 40.0 31.0 41.0 26 36.45094926357384 38.0 35.0 40.0 31.0 41.0 27 36.502963586484825 38.0 35.0 40.0 31.0 41.0 28 36.48425308461596 38.0 35.0 40.0 31.0 41.0 29 36.46556438985882 38.0 35.0 40.0 31.0 41.0 30 36.200346296934356 38.0 35.0 40.0 30.0 41.0 31 36.08371314052939 38.0 35.0 40.0 30.0 41.0 32 35.72391760400902 38.0 35.0 40.0 29.0 41.0 33 35.44551056990706 38.0 35.0 40.0 27.0 41.0 34 35.23267752079308 38.0 34.0 40.0 25.0 41.0 35 35.059720956198234 38.0 34.0 40.0 24.0 41.0 36 34.91795292280719 38.0 34.0 40.0 23.0 41.0 37 34.805275576471 38.0 34.0 40.0 23.0 41.0 38 34.65530806906749 38.0 34.0 40.0 23.0 41.0 39 34.63000309660987 38.0 34.0 40.0 23.0 41.0 40 34.51530205030465 38.0 34.0 40.0 22.0 41.0 41 34.407055909073065 38.0 34.0 40.0 22.0 41.0 42 34.39764832107047 38.0 34.0 40.0 22.0 41.0 43 34.28088432199509 38.0 33.0 40.0 21.0 41.0 44 34.04108895993161 37.0 33.0 40.0 20.0 41.0 45 33.95077698739113 37.0 33.0 40.0 20.0 41.0 46 33.850429382030065 37.0 33.0 40.0 20.0 41.0 47 33.838391856352196 37.0 33.0 40.0 20.0 41.0 48 33.772163658012154 37.0 33.0 40.0 20.0 41.0 49 33.65963023861342 37.0 33.0 40.0 20.0 41.0 50 33.47474954532172 36.0 33.0 40.0 18.0 41.0 51 31.95173650030748 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 26.0 10 24.0 11 19.0 12 5.0 13 9.0 14 14.0 15 14.0 16 29.0 17 70.0 18 153.0 19 308.0 20 480.0 21 796.0 22 1136.0 23 1633.0 24 2480.0 25 3751.0 26 4709.0 27 5160.0 28 5190.0 29 5252.0 30 5750.0 31 6771.0 32 8851.0 33 12062.0 34 19392.0 35 21235.0 36 21238.0 37 30899.0 38 40424.0 39 31394.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.332837584993214 17.32618641591396 21.880819772944353 18.46015622614847 2 35.33188243349921 24.896743325933453 23.633675414226087 16.137698826341246 3 30.02272301042816 23.310494018309253 32.14237427109729 14.524408700165298 4 27.41372016241937 24.5020346035249 31.2447935520732 16.839451681982528 5 24.74496582825591 27.667991085252723 29.431750282402096 18.15529280408927 6 23.60968759131728 34.10545046950711 29.257293388519862 13.02756855065574 7 63.34006446182229 17.62974141126904 15.196067741611893 3.834126385296773 8 72.87631442365985 7.164944631743304 15.301614162410646 4.657126782186206 9 66.9111970795916 8.720663982938117 17.546438244440278 6.821700693030011 10 38.77522537649978 24.84745925341172 24.008757736072887 12.368557634015605 11 33.030796003192556 23.455293240231505 27.753474963255016 15.760435793320918 12 28.2519855375235 22.022565999223666 32.940514560608506 16.78493390264433 13 21.71334115481741 26.83408713249565 34.69118949071671 16.761382221970226 14 17.727437271843094 30.121291155471624 33.16818080712482 18.983090765560465 15 17.36456693256805 24.985280199578686 40.64322256774379 17.00693030010947 16 18.657292516235394 23.009119734127694 38.97585080446435 19.35773694517256 17 18.341089396073848 23.04401111290414 34.03174243184187 24.583157059180138 18 20.72591513544397 24.535181413362526 35.046645412001766 19.69225803919174 19 23.38071291809685 25.041106405621 31.71800787672876 19.860172799553393 20 24.112559587932818 25.035000414335123 32.59290919954816 18.259530798183903 21 22.145994251645345 26.795270473606852 32.220879873344295 18.837855401403505 22 19.945656677555686 23.622771858358448 32.37047665984831 24.061094804237555 23 19.555309377494186 26.096134471373805 33.07746322230606 21.27109292882595 24 20.34777981795423 23.907572737621194 35.382911074959765 20.36173636946481 25 18.078531770781087 26.79745118478038 34.281651932328174 20.84236511211036 26 18.45928394167906 27.296397901283566 33.46170453108168 20.782613625955694 27 20.745977678240425 27.002438035092002 32.781758787175676 19.469825499491893 28 16.609604724292687 26.724615431584546 36.98268079185984 19.68309905226292 29 18.671249067745972 24.63549412734481 36.07376037473341 20.61949643017581 30 18.302708879419757 24.134802841902804 35.92721658387234 21.635271694805112 31 23.390308047260373 24.786399340552943 31.2993113314114 20.523981280775285 32 22.775783638560206 27.0800713528696 31.029775430363348 19.114369578206844 33 21.463867796565815 26.554083817814668 30.17231979693217 21.809728588687342 34 19.55574551972889 27.115398873880753 32.07695293589145 21.251902670498904 35 20.591583327154652 24.79643061195117 31.248718832185553 23.363267228708626 36 22.59958217573915 26.58112463636641 30.980491357841622 19.838801830052816 37 20.10397630875381 28.018213299721307 31.661309386217035 20.21650100530785 38 19.66957864298705 29.08676177474998 29.91107059834353 21.332588983919436 39 21.594274324742784 26.346916256329518 30.527775718217224 21.531033700710474 40 21.313834867827094 24.87755306760641 32.76213238661392 21.046479677952572 41 18.88888404286406 25.82616242809105 30.379923500652033 24.90503002839286 42 22.230169702943524 24.56745593873074 29.560848383874948 23.64152597445079 43 23.490620761242656 24.853565244697602 29.04358369351413 22.612230300545612 44 20.182481911000817 27.25060296663948 30.169266801289236 22.397648321070466 45 19.76945521473463 27.254092104517124 29.254240392876923 23.72221228787132 46 21.08311562566784 27.308173741620617 30.03929641534697 21.569414217364567 47 20.589402615981122 24.479791349554915 33.44862026404051 21.482185770423452 48 20.654387808952254 24.381659346746158 31.972278799562115 22.991674044739472 49 20.412328868690658 23.850001962640054 32.907803893005585 22.8298652756637 50 18.936859688681672 25.41444415852898 32.85721139377974 22.79148475900961 51 19.531757696820087 24.315801869305616 29.70303075238897 26.449409681485324 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 99.0 1 300.0 2 501.0 3 3397.0 4 6293.0 5 4414.5 6 2536.0 7 2336.5 8 2137.0 9 2033.5 10 1930.0 11 1854.5 12 1779.0 13 1732.0 14 1685.0 15 1537.5 16 1390.0 17 1321.0 18 1252.0 19 1277.5 20 1303.0 21 1201.5 22 1100.0 23 1150.5 24 1201.0 25 1476.5 26 1849.0 27 1946.0 28 2677.5 29 3409.0 30 3815.0 31 4221.0 32 4882.0 33 5543.0 34 5969.0 35 6395.0 36 6561.0 37 6727.0 38 7150.0 39 7573.0 40 9439.5 41 11306.0 42 12687.5 43 14069.0 44 15623.0 45 17177.0 46 19765.5 47 22354.0 48 21348.0 49 20342.0 50 19466.5 51 18591.0 52 16050.0 53 13509.0 54 11908.5 55 10308.0 56 9811.5 57 9315.0 58 8604.0 59 7893.0 60 7268.5 61 6644.0 62 6222.5 63 5801.0 64 4767.5 65 3734.0 66 3052.0 67 2370.0 68 1966.5 69 1563.0 70 1489.5 71 1416.0 72 1063.5 73 711.0 74 680.0 75 497.0 76 345.0 77 269.5 78 194.0 79 167.0 80 140.0 81 91.0 82 42.0 83 31.5 84 21.0 85 14.0 86 7.0 87 4.5 88 2.0 89 3.5 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 229283.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.844423703458176 #Duplication Level Percentage of deduplicated Percentage of total 1 77.28994531120529 28.47703493063158 2 8.62828191955302 6.358081497537977 3 3.340514690215204 3.6923801590174588 4 1.90700537418026 2.8105005604427715 5 1.2228035701602784 2.2526746422543322 6 0.8593953455337484 1.8998355743775162 7 0.6179123558796373 1.5936637256141972 8 0.4569236961102298 1.3468072207708377 9 0.37406188593479955 1.2403885155026757 >10 5.109022467387959 41.64155214298487 >50 0.15625369918795426 3.589014449392236 >100 0.031960983924808825 2.1017694290462003 >500 0.00473496058145316 1.4375248055895988 >1k 0.00118374014536329 1.5587723468377506 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3574 1.5587723468377506 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGC 986 0.43003624341970403 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCG 826 0.3602534858668109 No Hit GCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 807 0.35196678340740484 TruSeq Adapter, Index 13 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 677 0.29526829289567913 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 445 0.1940832944439841 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 351 0.15308592438165936 No Hit CCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGC 291 0.12691739029932442 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTCTGCT 290 0.12648124806461883 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 255 0.11121626984992347 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14523536415695887 0.0 2 0.0 0.0 0.0 0.8884217320952709 0.0 3 0.0 0.0 0.0 1.087738733355722 0.0 4 0.0 0.0 0.0 1.4436307968754771 0.0 5 0.0 0.0 0.0 2.4947335825159302 0.0 6 0.0 0.0 0.0 2.9962971524273496 0.0 7 0.0 0.0 0.0 3.541038803574622 0.0 8 0.0 0.0 0.0 4.556814068203923 0.0 9 0.0 0.0 0.0 4.889154451049576 0.0 10 0.0 0.0 0.0 6.020943550110562 0.0 11 0.0 0.0 0.0 6.972605906238142 0.0 12 0.0 0.0 0.0 8.265767632140193 0.0 13 0.0 0.0 0.0 8.703654435784598 0.0 14 0.0 0.0 0.0 8.902535294810344 0.0 15 0.0 0.0 0.0 9.258863500564804 0.0 16 0.0 0.0 0.0 9.842421810600873 0.0 17 0.0 0.0 0.0 10.52105912780276 0.0 18 0.0 0.0 0.0 11.40860857542862 0.0 19 0.0 0.0 0.0 11.857835077175368 0.0 20 0.0 0.0 0.0 12.281329187074489 0.0 21 0.0 0.0 0.0 12.749745947148284 0.0 22 0.0 0.0 0.0 13.287509322540267 0.0 23 0.0 0.0 0.0 13.832687115922244 0.0 24 0.0 0.0 0.0 14.257925794760187 0.0 25 0.0 0.0 0.0 14.639986392362276 0.0 26 0.0 0.0 0.0 14.961423219340292 0.0 27 0.0 0.0 0.0 15.288966037604183 0.0 28 0.0 0.0 0.0 15.645294243358643 0.0 29 0.0 0.0 0.0 16.016451285093094 0.0 30 0.0 0.0 0.0 16.480506622819835 0.0 31 0.0 0.0 0.0 16.87477920299368 0.0 32 0.0 0.0 0.0 17.235468831095197 0.0 33 0.0 0.0 0.0 17.578276627573786 0.0 34 0.0 0.0 0.0 17.92631813086884 0.0 35 0.0 0.0 0.0 18.34283396501267 0.0 36 0.0 0.0 0.0 18.768072643850612 0.0 37 0.0 0.0 0.0 19.161472939555047 0.0 38 0.0 0.0 0.0 19.50995058508481 0.0 39 0.0 0.0 0.0 19.908148445371005 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 20 7.021461E-4 45.000004 1 ACTATAT 20 7.021461E-4 45.000004 40 CACGGGC 20 7.021461E-4 45.000004 4 CCTAGGA 20 7.021461E-4 45.000004 4 GACCGAT 40 6.7739165E-9 45.000004 9 TCGATGG 20 7.021461E-4 45.000004 2 ATATCGG 35 1.2062446E-7 45.000004 9 CTAACGG 20 7.021461E-4 45.000004 2 CGGATAC 20 7.021461E-4 45.000004 14 TCACTAA 20 7.021461E-4 45.000004 11 GGCATGT 20 7.021461E-4 45.000004 8 GCGGATA 20 7.021461E-4 45.000004 13 GTAAGTT 20 7.021461E-4 45.000004 10 TACCGAG 20 7.021461E-4 45.000004 1 AAGTCCG 20 7.021461E-4 45.000004 30 AACACGT 20 7.021461E-4 45.000004 41 GCGAGAC 25 3.8810074E-5 45.0 21 ACACGAC 25 3.8810074E-5 45.0 26 ATGGACG 25 3.8810074E-5 45.0 21 TGGGTAC 50 2.1827873E-11 45.0 6 >>END_MODULE