SRR2936654.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936654.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	216212
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGC	3250	1.5031543115090744	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCG	3202	1.4809538786006327	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2407	1.1132592085545667	No Hit
GAATCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTC	2279	1.0540580541320554	No Hit
GCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGC	965	0.44632120326346364	No Hit
GAATGACTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCT	557	0.2576175235417091	No Hit
GAACTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCT	475	0.21969178398978778	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTC	473	0.21876676595193606	No Hit
GAATGCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTT	416	0.19240375187316153	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATAGAGCCTCGTA	387	0.17899099032431132	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	355	0.16419070171868352	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTCGTC	20	7.0205715E-4	45.0	35
CGAGTTA	20	7.0205715E-4	45.0	32
GGCACCC	20	7.0205715E-4	45.0	8
GTTTACA	20	7.0205715E-4	45.0	9
GGCGTAT	20	7.0205715E-4	45.0	8
ACCTGAC	25	3.8802697E-5	45.0	42
GGTTTAC	20	7.0205715E-4	45.0	8
CGATTAT	25	3.8802697E-5	45.0	10
TAACGCC	20	7.0205715E-4	45.0	12
TGACGAA	20	7.0205715E-4	45.0	38
CCAGATA	25	3.8802697E-5	45.0	21
TCGGCGG	20	7.0205715E-4	45.0	3
GCCGATG	20	7.0205715E-4	45.0	10
AACATAG	20	7.0205715E-4	45.0	1
TGATTGG	20	7.0205715E-4	45.0	2
CGTAGCC	25	3.8802697E-5	45.0	16
AACGCCG	20	7.0205715E-4	45.0	13
TCGTCCC	20	7.0205715E-4	45.0	38
CGAATAT	55	1.8189894E-12	45.0	14
ATGGTAA	20	7.0205715E-4	45.0	12