SRR2936652.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936652.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	341931
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC	5254	1.5365673191374867	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG	5165	1.5105386759316937	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4889	1.4298206363272121	No Hit
GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC	4019	1.175383337573955	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	2120	0.6200081302952934	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCT	1069	0.3126361751347494	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTC	801	0.23425778885213683	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	780	0.22811619888223064	No Hit
GAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	761	0.22255952224279169	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTA	708	0.20705931898540933	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC	630	0.18424769909718627	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG	622	0.18190804577531725	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT	620	0.18132313244485	No Hit
GAATGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT	562	0.1643606458612995	No Hit
TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	502	0.14681324594728176	No Hit
GAATCTATCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC	482	0.14096411264260916	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	355	0.1038221161579383	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGGCG	20	7.0263265E-4	45.000004	27
CGAGTGT	20	7.0263265E-4	45.000004	19
TCCGAGT	20	7.0263265E-4	45.000004	17
GACACGT	20	7.0263265E-4	45.000004	24
GCGCGAG	20	7.0263265E-4	45.000004	1
GCGCGAA	20	7.0263265E-4	45.000004	1
ACACCGC	25	3.8850372E-5	45.000004	15
CGTTGCG	20	7.0263265E-4	45.000004	2
CGACCGG	20	7.0263265E-4	45.000004	2
TGAACGC	40	6.7902874E-9	45.000004	29
CGCGAAG	20	7.0263265E-4	45.000004	2
ATCGTGG	20	7.0263265E-4	45.000004	2
AACGGCG	20	7.0263265E-4	45.000004	7
AATGCGG	20	7.0263265E-4	45.000004	2
CTAACGG	20	7.0263265E-4	45.000004	2
GTATGCG	25	3.8850372E-5	45.000004	1
AACGCTT	40	6.7902874E-9	45.000004	31
TCGCTAT	40	6.7902874E-9	45.000004	23
CCGAGTG	20	7.0263265E-4	45.000004	18
ACGCTTG	40	6.7902874E-9	45.000004	32