##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936652.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 341931 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09586437029693 31.0 31.0 33.0 28.0 34.0 2 31.156420447400208 31.0 31.0 34.0 28.0 34.0 3 30.82910587223738 31.0 30.0 34.0 27.0 34.0 4 34.75343563467483 35.0 35.0 37.0 32.0 37.0 5 35.08548800781444 35.0 35.0 37.0 33.0 37.0 6 35.10545109978329 35.0 35.0 37.0 32.0 37.0 7 31.03328449307024 35.0 35.0 37.0 0.0 37.0 8 33.07041771585495 36.0 35.0 37.0 17.0 37.0 9 36.29346271616203 39.0 35.0 39.0 32.0 39.0 10 36.1104696561587 37.0 35.0 39.0 32.0 39.0 11 36.335517984622626 37.0 35.0 39.0 32.0 39.0 12 36.422362991363755 38.0 35.0 39.0 32.0 39.0 13 36.19674437240262 38.0 35.0 39.0 32.0 39.0 14 37.30268972395015 39.0 36.0 40.0 32.0 41.0 15 37.468214347339085 39.0 36.0 41.0 32.0 41.0 16 37.55264658659203 39.0 36.0 40.0 33.0 41.0 17 37.390552479886296 39.0 36.0 40.0 32.0 41.0 18 37.25016158230754 39.0 36.0 40.0 32.0 41.0 19 36.99084903094484 38.0 36.0 40.0 32.0 41.0 20 36.89067969853567 38.0 35.0 40.0 32.0 41.0 21 36.959447958798705 39.0 35.0 40.0 32.0 41.0 22 37.03009671541919 39.0 35.0 40.0 32.0 41.0 23 37.115295191135054 39.0 35.0 40.0 32.0 41.0 24 36.990427893346904 39.0 35.0 40.0 32.0 41.0 25 36.77565356753263 38.0 35.0 40.0 32.0 41.0 26 36.73271507994303 38.0 35.0 40.0 32.0 41.0 27 36.7828158312642 38.0 35.0 40.0 32.0 41.0 28 36.80008539734625 38.0 35.0 40.0 32.0 41.0 29 36.79171236302061 39.0 35.0 40.0 32.0 41.0 30 36.62049360835958 38.0 35.0 40.0 31.0 41.0 31 36.534134079682744 38.0 35.0 40.0 31.0 41.0 32 36.29308544706388 38.0 35.0 40.0 30.0 41.0 33 36.02837707022762 38.0 35.0 40.0 30.0 41.0 34 35.89931886842667 38.0 35.0 40.0 29.0 41.0 35 35.757319459189134 38.0 35.0 40.0 28.0 41.0 36 35.66146386259216 38.0 35.0 40.0 27.0 41.0 37 35.55664739377243 38.0 35.0 40.0 27.0 41.0 38 35.475353214537435 38.0 35.0 40.0 27.0 41.0 39 35.44225004459964 38.0 35.0 40.0 26.0 41.0 40 35.37111873448152 38.0 35.0 40.0 25.0 41.0 41 35.22231385864399 38.0 35.0 40.0 25.0 41.0 42 35.26246523421392 38.0 35.0 40.0 25.0 41.0 43 35.17752996949677 38.0 35.0 40.0 25.0 41.0 44 35.00345683778306 38.0 34.0 40.0 24.0 41.0 45 34.930746261672674 38.0 34.0 40.0 24.0 41.0 46 34.82444996212686 38.0 34.0 40.0 23.0 41.0 47 34.776162442130136 38.0 34.0 40.0 23.0 41.0 48 34.74516203561537 38.0 34.0 40.0 23.0 41.0 49 34.68240960895619 38.0 34.0 40.0 23.0 41.0 50 34.47990676481513 38.0 34.0 40.0 23.0 41.0 51 32.79546750660221 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 11.0 10 20.0 11 14.0 12 7.0 13 4.0 14 8.0 15 12.0 16 37.0 17 72.0 18 155.0 19 344.0 20 524.0 21 874.0 22 1284.0 23 2006.0 24 2990.0 25 4427.0 26 5662.0 27 6065.0 28 6054.0 29 6375.0 30 7563.0 31 9499.0 32 12706.0 33 17777.0 34 27958.0 35 32626.0 36 32877.0 37 47700.0 38 64475.0 39 51794.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.169689206301854 20.049951598421902 25.43378634870778 16.34657284656846 2 32.731457516282525 27.165129806890864 24.36193267062653 15.741480006200081 3 27.254036633121885 26.440422190441932 32.15648771243321 14.149053464002973 4 25.086347830410226 22.716863928687367 36.64306541378231 15.553722827120092 5 26.141239021907932 26.31466582439147 30.338869538006207 17.205225615694395 6 23.110510600091832 34.615463353717566 29.318488233006075 12.955537813184531 7 63.468068119006475 16.15793829749277 16.994949273391416 3.3790443101093497 8 74.10325475022739 7.298548537570445 13.920644808455506 4.677551903746662 9 70.11385337977545 4.792779829848713 15.369475128022906 9.72389166235293 10 37.80002398144655 27.1680543735432 22.21413092115076 12.817790723859494 11 27.011005144312744 24.09258008194636 31.97048527334462 16.92592950039628 12 25.17349991664985 20.156990737897413 35.85343241765152 18.816076927801223 13 19.460943874641377 25.59609979791244 39.419648993510386 15.523307333935794 14 16.44162126276939 29.851636733726977 34.24901515217982 19.457726851323805 15 13.333976737996847 26.18715471834961 44.682699141054776 15.79616940259877 16 16.222278763844166 25.42735230207264 37.041976305160986 21.30839262892221 17 17.116026332798135 24.432999640278304 35.13749850115959 23.31347552576397 18 18.355457680058258 24.201666418078503 37.66812602542618 19.77474987643706 19 18.30837215695564 26.91537181478135 34.07412606637011 20.702129961892897 20 20.377210606818334 26.544536763265103 36.57667775077428 16.501574879142282 21 18.944172947173552 29.218760510161406 34.30545928856992 17.531607254095125 22 16.791106977723576 23.882011282978144 34.89446701235045 24.432414726947833 23 15.805235559221012 27.27626333967964 34.62072757369177 22.29777352740758 24 19.198317789261576 23.43542995516639 35.6419862486876 21.72426600688443 25 14.942488396781805 29.05966408427431 33.94749233032395 22.05035518861993 26 16.172561130754453 26.9384758913348 35.304783713673224 21.58417926423752 27 17.10579034951496 29.409734712558965 33.226294193857825 20.258180744068248 28 13.558875913561508 26.274891717919697 40.509927441501354 19.65630492701744 29 18.452260836250588 22.20798933118085 37.59325711912637 21.746492713442187 30 16.669445004986386 28.212417125092486 36.15378541284645 18.964352457074675 31 20.524023852765616 24.851505128227625 33.789565731097795 20.834905287908963 32 21.772813813313213 27.1028365371961 31.553442068721466 19.57090758076922 33 18.175304374274344 26.280740851224373 30.74860132599852 24.79535344850277 34 17.88197033904501 23.58429039777031 36.91183308913202 21.62190617405266 35 16.7826257344318 26.046190605706997 32.002363049855084 25.168820610006108 36 18.64411240864385 26.789030535400414 35.02870462169268 19.538152434263054 37 18.768406491368143 27.504964451892338 35.5358244792078 18.190804577531726 38 17.635721826918296 26.29068437784231 30.73076146941927 25.34283232582012 39 21.145201809721843 24.738616855447443 33.65971497173406 20.45646636309665 40 18.305447590303306 23.75830211358432 32.83674191576663 25.099508380345743 41 16.220231567187533 26.289222094516145 32.836449459101395 24.654096879194924 42 18.799406897882907 24.45347160684466 33.15815179085839 23.588969704414048 43 20.687214671965982 26.23599498144362 30.59242946676376 22.48436087982663 44 19.09303338977747 24.49149097332503 32.820656799178785 23.59481883771872 45 18.340834846796575 24.876656401437717 30.367237834533867 26.415270917231837 46 22.029298308723106 26.530791299999123 31.127625164141303 20.31228522713647 47 16.358271113177807 24.13615612506617 37.57161532589908 21.93395743585694 48 19.033664686735044 24.157505461628222 32.650447020012805 24.15838283162392 49 18.114473387905747 22.065562935212075 36.62376327387689 23.196200403005285 50 18.9906735569457 22.62210796915167 34.181750119176094 24.205468354726538 51 18.24110712395191 23.123086236696878 30.161348342209394 28.47445829714182 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 140.0 1 261.0 2 382.0 3 4326.5 4 8271.0 5 5536.0 6 2801.0 7 2610.5 8 2420.0 9 2385.5 10 2351.0 11 2336.0 12 2321.0 13 2291.0 14 2261.0 15 2156.5 16 2052.0 17 1842.0 18 1632.0 19 1647.0 20 1662.0 21 1873.0 22 2084.0 23 2101.0 24 2118.0 25 2407.0 26 3073.0 27 3450.0 28 4019.0 29 4588.0 30 5590.5 31 6593.0 32 7876.5 33 9160.0 34 10221.0 35 11282.0 36 11948.5 37 12615.0 38 13800.5 39 14986.0 40 17058.5 41 19131.0 42 23215.0 43 27299.0 44 40436.0 45 53573.0 46 44620.0 47 35667.0 48 33752.0 49 31837.0 50 26947.5 51 22058.0 52 18669.5 53 15281.0 54 13269.0 55 11257.0 56 9908.0 57 8559.0 58 7659.0 59 6759.0 60 6037.5 61 5316.0 62 4475.5 63 3635.0 64 2884.0 65 2133.0 66 1692.5 67 1252.0 68 1019.0 69 786.0 70 661.5 71 537.0 72 473.5 73 410.0 74 361.5 75 241.5 76 170.0 77 104.0 78 38.0 79 25.0 80 12.0 81 17.0 82 22.0 83 19.5 84 17.0 85 9.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 341931.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.4857068710422 #Duplication Level Percentage of deduplicated Percentage of total 1 75.19008886497504 26.681734530701178 2 10.194523356184742 7.235197350151301 3 3.86012881054738 4.109381983666474 4 2.115745215304178 3.0031485809637646 5 1.309708810790631 2.32379714730688 6 0.9063179454660829 1.9296799766864776 7 0.6908126015627175 1.715978143731366 8 0.4902430806820519 1.3917297805311986 9 0.4299921785534247 1.3732718764488898 >10 4.6085851773002595 36.20641128517323 >50 0.1535094587280637 3.346338550681528 >100 0.03796470484672543 2.3359352599541285 >500 0.007427877035228889 1.753122927041802 >1k 0.0033012786823239508 3.5428546689650315 >5k 0.0016506393411619754 3.0514179379967485 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC 5254 1.5365673191374867 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG 5165 1.5105386759316937 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4889 1.4298206363272121 No Hit GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 4019 1.175383337573955 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 2120 0.6200081302952934 No Hit GAATGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCT 1069 0.3126361751347494 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTC 801 0.23425778885213683 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 780 0.22811619888223064 No Hit GAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 761 0.22255952224279169 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTA 708 0.20705931898540933 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC 630 0.18424769909718627 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG 622 0.18190804577531725 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 620 0.18132313244485 No Hit GAATGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT 562 0.1643606458612995 No Hit TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 502 0.14681324594728176 No Hit GAATCTATCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 482 0.14096411264260916 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 355 0.1038221161579383 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19799316236316683 0.0 2 0.0 0.0 0.0 1.428358353001044 0.0 3 0.0 0.0 0.0 1.7836932012599034 0.0 4 0.0 0.0 0.0 2.4560510746320166 0.0 5 0.0 0.0 0.0 4.77493997326946 0.0 6 0.0 0.0 0.0 5.5397141528554 0.0 7 0.0 0.0 0.0 6.464754584989369 0.0 8 0.0 0.0 0.0 7.914462274552468 0.0 9 0.0 0.0 0.0 8.312203339270203 0.0 10 0.0 0.0 0.0 10.934077343089688 0.0 11 0.0 0.0 0.0 12.483805212162688 0.0 12 0.0 0.0 0.0 15.377371457984212 0.0 13 0.0 0.0 0.0 15.941812821885117 0.0 14 0.0 0.0 0.0 16.17811780739389 0.0 15 0.0 0.0 0.0 16.72705896803741 0.0 16 0.0 0.0 0.0 17.471361181057 0.0 17 0.0 0.0 0.0 18.434128523006102 0.0 18 0.0 0.0 0.0 19.450122978027732 0.0 19 0.0 0.0 0.0 20.133594204678722 0.0 20 0.0 0.0 0.0 20.777876238188405 0.0 21 0.0 0.0 0.0 21.501998941306873 0.0 22 0.0 0.0 0.0 22.292801764098606 0.0 23 0.0 0.0 0.0 23.07424597360286 0.0 24 0.0 0.0 0.0 23.680801097297408 0.0 25 0.0 0.0 0.0 24.18850586814299 0.0 26 0.0 0.0 0.0 24.669597082452306 0.0 27 0.0 0.0 0.0 25.14776373010929 0.0 28 0.0 0.0 0.0 25.62476055110534 0.0 29 0.0 0.0 0.0 26.102342285431856 0.0 30 0.0 0.0 0.0 26.715331455761543 0.0 31 0.0 0.0 0.0 27.26164050641796 0.0 32 0.0 0.0 0.0 27.712901140873452 0.0 33 0.0 0.0 0.0 28.17147319195978 0.0 34 0.0 0.0 0.0 28.66630986953508 0.0 35 0.0 0.0 0.0 29.20764715688253 0.0 36 0.0 0.0 0.0 29.708625424427737 0.0 37 0.0 0.0 0.0 30.159008688887525 0.0 38 0.0 0.0 0.0 30.6310337465746 0.0 39 0.0 0.0 0.0 31.102766347596447 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGGCG 20 7.0263265E-4 45.000004 27 CGAGTGT 20 7.0263265E-4 45.000004 19 TCCGAGT 20 7.0263265E-4 45.000004 17 GACACGT 20 7.0263265E-4 45.000004 24 GCGCGAG 20 7.0263265E-4 45.000004 1 GCGCGAA 20 7.0263265E-4 45.000004 1 ACACCGC 25 3.8850372E-5 45.000004 15 CGTTGCG 20 7.0263265E-4 45.000004 2 CGACCGG 20 7.0263265E-4 45.000004 2 TGAACGC 40 6.7902874E-9 45.000004 29 CGCGAAG 20 7.0263265E-4 45.000004 2 ATCGTGG 20 7.0263265E-4 45.000004 2 AACGGCG 20 7.0263265E-4 45.000004 7 AATGCGG 20 7.0263265E-4 45.000004 2 CTAACGG 20 7.0263265E-4 45.000004 2 GTATGCG 25 3.8850372E-5 45.000004 1 AACGCTT 40 6.7902874E-9 45.000004 31 TCGCTAT 40 6.7902874E-9 45.000004 23 CCGAGTG 20 7.0263265E-4 45.000004 18 ACGCTTG 40 6.7902874E-9 45.000004 32 >>END_MODULE