SRR2936651.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936651.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	827524
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGC	6020	0.7274713482630111	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCG	6011	0.7263837665131162	No Hit
GAATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTC	5327	0.6437275535211063	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3887	0.4697144735379276	No Hit
GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	2373	0.28675905472227997	No Hit
GAACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCT	1217	0.147065221069117	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCT	1045	0.12628032540445958	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	897	0.10839564773952176	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTC	847	0.1023535269067725	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTAGAC	20	7.0321414E-4	45.0	45
ACGTCCA	20	7.0321414E-4	45.0	24
TCGACGT	20	7.0321414E-4	45.0	26
TTCGAAA	20	7.0321414E-4	45.0	35
TACGTCC	20	7.0321414E-4	45.0	23
TACGTAG	25	3.889856E-5	45.0	1
CCCGATA	20	7.0321414E-4	45.0	23
AATAGCG	30	2.164763E-6	44.999996	1
TACGGCT	810	0.0	40.555557	7
CGTTTTT	1660	0.0	39.849396	1
CACGGGA	240	0.0	37.499996	4
TAGCGCG	30	1.1396458E-4	37.499996	1
GCCGATG	30	1.1396458E-4	37.499996	9
AACGTAA	55	2.746674E-9	36.818184	39
ACGTAAC	55	2.746674E-9	36.818184	40
ACGGGAG	370	0.0	36.486485	5
ATGGGCG	105	0.0	36.42857	5
AGGGTAC	210	0.0	36.42857	6
ACACGTT	25	0.0021067685	36.0	44
GCGCGAC	150	0.0	36.0	9