SRR2936650.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936650.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	370345
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2817	0.7606421039841229	No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	955	0.25786766393497956	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCG	893	0.24112651716642589	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGC	843	0.2276255923530762	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	730	0.19711350227490584	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	544	0.1468900619692449	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT	436	0.1177280643724095	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTATGG	30	2.1615015E-6	45.000004	2
CGTCTAC	30	2.1615015E-6	45.000004	40
ACGTCTA	30	2.1615015E-6	45.000004	39
AATTACG	30	2.1615015E-6	45.000004	17
TCACGAC	25	3.8856677E-5	45.0	25
GCGACGT	25	3.8856677E-5	45.0	17
CTACTAG	20	7.0270867E-4	45.0	2
TACTTCG	20	7.0270867E-4	45.0	29
GGTAACC	20	7.0270867E-4	45.0	28
CGACGTC	25	3.8856677E-5	45.0	18
CCCTAGT	20	7.0270867E-4	45.0	25
GCAACGC	20	7.0270867E-4	45.0	19
ATTACGT	20	7.0270867E-4	45.0	18
ATTGTCG	20	7.0270867E-4	45.0	17
ACGGGTC	40	6.7939254E-9	45.0	5
TGCGCAC	20	7.0270867E-4	45.0	12
CGTAGAT	25	3.8856677E-5	45.0	12
TCGCTAT	20	7.0270867E-4	45.0	23
CATACGG	35	1.2089549E-7	45.0	2
TTAACGT	20	7.0270867E-4	45.0	20