##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936648.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 648387 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15984589450436 31.0 31.0 33.0 28.0 34.0 2 31.211384558913117 31.0 31.0 34.0 28.0 34.0 3 30.98832178930176 31.0 31.0 34.0 28.0 34.0 4 34.959686113385985 35.0 35.0 37.0 32.0 37.0 5 35.20147381116524 35.0 35.0 37.0 33.0 37.0 6 35.18627301287657 36.0 35.0 37.0 32.0 37.0 7 31.088592152526193 35.0 35.0 37.0 0.0 37.0 8 33.15311071936976 36.0 35.0 37.0 17.0 37.0 9 36.45181504255946 39.0 35.0 39.0 32.0 39.0 10 36.08468245045012 37.0 35.0 39.0 32.0 39.0 11 36.393715481649075 38.0 35.0 39.0 32.0 39.0 12 36.52170540124956 38.0 35.0 39.0 32.0 39.0 13 36.549497445198625 39.0 35.0 39.0 32.0 39.0 14 37.58695501297836 39.0 36.0 41.0 33.0 41.0 15 37.77824509128036 39.0 37.0 41.0 33.0 41.0 16 37.67702622045167 39.0 36.0 41.0 33.0 41.0 17 37.59710173091071 39.0 36.0 41.0 33.0 41.0 18 37.51973898304562 39.0 36.0 40.0 33.0 41.0 19 37.31998482387833 39.0 36.0 40.0 32.0 41.0 20 37.34935462925691 39.0 36.0 40.0 32.0 41.0 21 37.329668855174454 39.0 36.0 40.0 32.0 41.0 22 37.41568538542568 39.0 36.0 40.0 32.0 41.0 23 37.46866454756187 39.0 36.0 41.0 33.0 41.0 24 37.439219170032715 39.0 36.0 41.0 32.0 41.0 25 37.08732130656537 39.0 35.0 40.0 32.0 41.0 26 37.105299766960165 39.0 35.0 40.0 32.0 41.0 27 37.14300718552346 39.0 35.0 40.0 32.0 41.0 28 37.13522325401342 39.0 35.0 40.0 32.0 41.0 29 37.12724345182738 39.0 35.0 41.0 32.0 41.0 30 36.909222424262055 39.0 35.0 40.0 31.0 41.0 31 36.92487202858786 39.0 35.0 40.0 31.0 41.0 32 36.795975243180386 39.0 35.0 40.0 31.0 41.0 33 36.70903642423429 39.0 35.0 40.0 31.0 41.0 34 36.65381785877879 39.0 35.0 40.0 30.0 41.0 35 36.62199272965066 39.0 35.0 40.0 30.0 41.0 36 36.590934118049866 39.0 35.0 40.0 30.0 41.0 37 36.527348635922685 39.0 35.0 40.0 30.0 41.0 38 36.41820394301551 39.0 35.0 40.0 30.0 41.0 39 36.38958985914277 39.0 35.0 40.0 30.0 41.0 40 36.3429757228322 39.0 35.0 40.0 30.0 41.0 41 36.2111300812632 39.0 35.0 40.0 30.0 41.0 42 36.2158448580863 39.0 35.0 40.0 30.0 41.0 43 36.146921514465895 39.0 35.0 40.0 30.0 41.0 44 35.978466563950235 38.0 35.0 40.0 29.0 41.0 45 35.85797062556775 38.0 35.0 40.0 29.0 41.0 46 35.776226235257646 38.0 35.0 40.0 29.0 41.0 47 35.75086021157117 38.0 35.0 40.0 29.0 41.0 48 35.694915228096804 38.0 35.0 40.0 29.0 41.0 49 35.57044326922039 38.0 34.0 40.0 28.0 41.0 50 35.41490344501047 38.0 34.0 40.0 27.0 41.0 51 33.79324539202668 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 19.0 9 34.0 10 60.0 11 43.0 12 33.0 13 24.0 14 31.0 15 41.0 16 92.0 17 158.0 18 285.0 19 516.0 20 809.0 21 1255.0 22 2046.0 23 2788.0 24 3828.0 25 5218.0 26 6515.0 27 7620.0 28 8804.0 29 10568.0 30 13100.0 31 16791.0 32 22064.0 33 30737.0 34 46825.0 35 53910.0 36 65009.0 37 100405.0 38 136812.0 39 111938.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.09216563564661 21.027565327497314 24.111371757916185 11.768897278939892 2 33.79201001870796 22.954346709603985 25.421083396181604 17.832559875506448 3 34.01240308642832 22.89065018268411 26.276128299919648 16.820818430967925 4 28.947680937464813 25.97260586655809 25.707949110639174 19.371764085337922 5 25.841357090749817 29.974845269877402 24.95469526686994 19.22910237250284 6 26.511790026635328 35.385657022734875 24.3357747764838 13.766778174145996 7 70.29397566576752 18.26424650710147 7.7836230522820475 3.6581547748489713 8 82.3551366699209 5.654956067903891 7.949727554685706 4.040179707489509 9 75.64849387788466 8.551374410652897 10.496663258208446 5.303468453253998 10 38.79627444720514 28.68148189275849 18.25730620755814 14.264937452478227 11 29.261845163459476 28.15324798307184 25.07483956340889 17.510067290059794 12 26.127143203056196 25.989571043219563 29.203855105053 18.679430648671243 13 24.897939039493387 26.635635816264053 29.76509399479015 18.70133114945241 14 20.867938438000763 29.776969618453176 29.52264619740988 19.83244574613618 15 20.61731651004724 28.239153468530372 32.181089380262094 18.962440641160295 16 23.042719857122368 27.21399411154141 30.523437391557817 19.2198486397784 17 23.429525885003862 25.949779992504478 28.463556487097986 22.157137635393678 18 25.57546650380097 25.46920280634868 28.976984424425535 19.978346265424815 19 24.42970016363684 27.904785259420684 27.273526458735294 20.391988118207184 20 25.815138181363906 26.618516410723842 27.902163368482096 19.664182039430155 21 24.736924090088174 27.654471789224644 28.612078897325212 18.996525223361974 22 23.773764742352945 25.72691926272427 28.201521622117653 22.29779437280513 23 21.919933619890593 27.59725287521187 28.72482020768461 21.75799329721293 24 21.785754495386243 26.165546193862614 30.711905081378866 21.336794229372273 25 21.51600818646888 28.385825132212705 28.67161124451909 21.42655543679932 26 21.818451017679255 28.859153561067696 27.982516614305965 21.339878806947084 27 22.16053067072597 28.41404901702224 27.827979277807852 21.597441034443936 28 19.718162146989375 29.085561555058938 29.567681030002145 21.628595267949542 29 20.44859011670499 28.073820110520415 29.79964126362805 21.677948509146542 30 21.391391252446457 27.092924441730016 29.409133742656778 22.106550563166753 31 22.661774526633014 28.35744701852443 26.85386967968204 22.126908775160516 32 21.7016997564726 29.549636251189494 27.75132752507376 20.997336467264148 33 21.928878894857544 27.867924557401675 27.490218033365878 22.7129785143749 34 20.151545296250543 29.300402383144636 28.77664111094146 21.771411209663363 35 20.632739397921306 29.377054135878726 27.98004895224611 22.010157513953857 36 21.724679859404954 29.46265116357978 27.299128452606237 21.513540524409034 37 20.822440918772276 29.956183575549787 26.748685584380933 22.472689921297004 38 21.11778922156058 29.92518357092292 27.033854781172355 21.92317242634414 39 21.481460917630983 28.57244207548887 27.646606116408872 22.299490890471276 40 22.834356641943778 27.447650862833463 28.728213243016903 20.98977925220586 41 20.064405979762086 28.48931270984767 27.662491690919154 23.783789619471086 42 21.77727190705551 28.347884828042513 27.25656128207382 22.618281982828154 43 21.91191371819608 27.489138431214695 27.545740429712502 23.053207420876728 44 20.929784218375755 28.20954152381217 27.313317509450375 23.547356748361704 45 21.071983244574614 28.27447188176197 27.065317472435446 23.58822740122797 46 21.736092796431763 28.644466961860743 26.864048785678925 22.755391456028576 47 20.606674717414137 28.713869957294026 28.7027654780247 21.976689847267142 48 20.684714530056894 28.163427089068723 28.45970076512947 22.692157615744918 49 21.531431074342947 27.246227947198204 29.168845149578875 22.053495828879974 50 20.24423685237366 27.94982009201295 28.66436248721828 23.14158056839511 51 20.032326372984034 26.878854758038024 27.751019067316278 25.337799801661664 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 224.0 1 581.0 2 938.0 3 2556.5 4 4175.0 5 2911.5 6 1648.0 7 1614.5 8 1581.0 9 1536.0 10 1491.0 11 1519.5 12 1548.0 13 1542.0 14 1536.0 15 1655.0 16 1774.0 17 1764.5 18 1755.0 19 1702.0 20 1649.0 21 1946.0 22 2243.0 23 2751.0 24 3259.0 25 3948.5 26 5616.5 27 6595.0 28 7962.0 29 9329.0 30 10747.0 31 12165.0 32 14266.0 33 16367.0 34 18482.0 35 20597.0 36 22829.5 37 25062.0 38 28076.5 39 31091.0 40 33682.5 41 36274.0 42 40323.5 43 44373.0 44 49674.0 45 54975.0 46 58203.0 47 61431.0 48 59659.0 49 57887.0 50 52437.0 51 46987.0 52 43967.5 53 40948.0 54 37449.0 55 33950.0 56 31675.5 57 29401.0 58 27587.5 59 25774.0 60 23211.0 61 20648.0 62 18414.5 63 16181.0 64 13712.5 65 11244.0 66 9097.5 67 6951.0 68 5668.5 69 4386.0 70 3647.5 71 2909.0 72 2326.0 73 1743.0 74 1491.5 75 963.0 76 686.0 77 559.0 78 432.0 79 302.0 80 172.0 81 116.5 82 61.0 83 50.5 84 40.0 85 28.5 86 17.0 87 10.5 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 648387.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.96427414582476 #Duplication Level Percentage of deduplicated Percentage of total 1 74.22072723944963 24.46632400023701 2 9.296562607111916 6.1290887678932116 3 3.7009745377269483 3.659998178050445 4 2.198855810896662 2.8993474303014946 5 1.4464800093073558 2.3841081786631415 6 1.044684362074062 2.066235702435926 7 0.7874801760591845 1.8171098685612115 8 0.6164868058584221 1.6257632060480693 9 0.501341316455736 1.487371733664801 >10 5.813729007608486 44.189276844075806 >50 0.33744984674896766 6.716293363496978 >100 0.03337416066564149 1.880195423362033 >500 9.270600184900417E-4 0.17495520193007136 >1k 9.270600184900417E-4 0.5039321012798038 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2115 0.3261940785364296 No Hit GCTGTCTCTTATACACATCTGACGCACCATAGATCGTATGCCGTCTTCTGC 1183 0.1824527635501637 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10718907072473692 0.0 2 0.0 0.0 0.0 0.538721473441016 0.0 3 0.0 0.0 0.0 0.7091443844494106 0.0 4 0.0 0.0 0.0 0.9699454183998137 0.0 5 0.0 0.0 0.0 1.6369853189530328 0.0 6 0.0 0.0 0.0 2.0444580165857738 0.0 7 0.0 0.0 0.0 2.418154589774317 0.0 8 0.0 0.0 0.0 3.1277616608599494 0.0 9 0.0 0.0 0.0 3.368821398331552 0.0 10 0.0 0.0 0.0 4.010567762771307 0.0 11 0.0 0.0 0.0 4.846025598909294 0.0 12 0.0 0.0 0.0 5.581697350502092 0.0 13 0.0 0.0 0.0 5.937040687120501 0.0 14 0.0 0.0 0.0 6.086642699498911 0.0 15 0.0 0.0 0.0 6.323075570608294 0.0 16 0.0 0.0 0.0 6.860254755261904 0.0 17 0.0 0.0 0.0 7.505702612791435 0.0 18 0.0 0.0 0.0 8.222249983420395 0.0 19 0.0 0.0 0.0 8.63064805432558 0.0 20 0.0 0.0 0.0 9.043827220471725 0.0 21 0.0 0.0 0.0 9.552011375922095 0.0 22 0.0 0.0 0.0 10.102300015268659 0.0 23 0.0 0.0 0.0 10.65937472527981 0.0 24 0.0 0.0 0.0 11.098772800811862 0.0 25 0.0 0.0 0.0 11.490051466176835 0.0 26 0.0 0.0 0.0 11.868529134606339 0.0 27 1.5422887874062867E-4 0.0 0.0 12.242842623309844 0.0 28 3.0845775748125734E-4 0.0 0.0 12.632887457644895 0.0 29 3.0845775748125734E-4 0.0 0.0 13.053006923334367 0.0 30 3.0845775748125734E-4 0.0 0.0 13.536360229307498 0.0 31 3.0845775748125734E-4 0.0 0.0 13.955554321724525 0.0 32 3.0845775748125734E-4 0.0 0.0 14.383076773593547 0.0 33 3.0845775748125734E-4 0.0 0.0 14.815071862946048 0.0 34 3.0845775748125734E-4 0.0 0.0 15.231181377788266 0.0 35 3.0845775748125734E-4 0.0 0.0 15.66147994947462 0.0 36 3.0845775748125734E-4 0.0 0.0 16.076355633286912 0.0 37 3.0845775748125734E-4 0.0 0.0 16.517141768727626 0.0 38 3.0845775748125734E-4 0.0 0.0 16.940500040870653 0.0 39 3.0845775748125734E-4 0.0 0.0 17.387301102582253 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGCT 25 3.888917E-5 45.000004 26 TATTACG 25 3.888917E-5 45.000004 1 CCGGATA 20 7.031009E-4 45.0 5 TCGGCGA 20 7.031009E-4 45.0 1 CCGTATG 20 7.031009E-4 45.0 45 CCATACG 20 7.031009E-4 45.0 2 GTCCGCG 20 7.031009E-4 45.0 1 ATCGCGT 20 7.031009E-4 45.0 20 CGACGGT 30 2.1640335E-6 44.999996 28 TTAAGCG 30 2.1640335E-6 44.999996 1 GCTTACG 55 6.002665E-11 40.909092 1 TACGGGA 140 0.0 40.17857 4 CGTTTTT 1180 0.0 39.47034 1 ACGATAG 40 3.4551158E-7 39.375 1 AATACGG 40 3.4551158E-7 39.375 2 ACGGGAG 295 0.0 38.898304 5 TCGGGCA 35 6.2440777E-6 38.571426 5 TACGCGG 35 6.2440777E-6 38.571426 2 AGACACG 230 0.0 38.152172 24 CGAATAT 65 9.094947E-12 38.07692 14 >>END_MODULE