##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936647.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1081325 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14413612928583 31.0 31.0 33.0 28.0 34.0 2 31.23167872748711 31.0 31.0 34.0 28.0 34.0 3 30.853755346449958 31.0 31.0 34.0 27.0 34.0 4 34.78094005040113 35.0 35.0 37.0 32.0 37.0 5 35.13863731995468 35.0 35.0 37.0 33.0 37.0 6 35.160623309365825 36.0 35.0 37.0 32.0 37.0 7 31.033054817006914 35.0 35.0 37.0 0.0 37.0 8 33.13568168681941 37.0 35.0 37.0 17.0 37.0 9 36.54008554319932 39.0 35.0 39.0 32.0 39.0 10 36.32645226920676 37.0 35.0 39.0 32.0 39.0 11 36.560138718701594 38.0 35.0 39.0 32.0 39.0 12 36.675250271657454 39.0 35.0 39.0 32.0 39.0 13 36.72353177814256 39.0 35.0 39.0 33.0 39.0 14 37.7871380019883 40.0 37.0 41.0 33.0 41.0 15 37.95026749589624 40.0 37.0 41.0 33.0 41.0 16 37.8559443275611 40.0 37.0 41.0 33.0 41.0 17 37.73618477331052 39.0 37.0 41.0 33.0 41.0 18 37.550101033454325 39.0 36.0 40.0 33.0 41.0 19 37.26891822532541 39.0 36.0 40.0 32.0 41.0 20 37.15374841051488 39.0 35.0 40.0 32.0 41.0 21 37.106181767738654 39.0 35.0 40.0 32.0 41.0 22 37.17698471782304 39.0 35.0 40.0 32.0 41.0 23 37.219353108454904 39.0 35.0 40.0 33.0 41.0 24 37.142556585670356 39.0 35.0 40.0 32.0 41.0 25 36.807871823919726 38.0 35.0 40.0 31.0 41.0 26 36.80658451436894 39.0 35.0 40.0 32.0 41.0 27 36.83234180288073 39.0 35.0 40.0 32.0 41.0 28 36.82021408919613 39.0 35.0 40.0 32.0 41.0 29 36.774515524934685 39.0 35.0 40.0 31.0 41.0 30 36.47396481168936 38.0 35.0 40.0 31.0 41.0 31 36.34686888770721 38.0 35.0 40.0 30.0 41.0 32 36.03227984186068 38.0 35.0 40.0 30.0 41.0 33 35.69024206413428 38.0 35.0 40.0 27.0 41.0 34 35.39648116893626 38.0 35.0 40.0 25.0 41.0 35 35.17463389822671 38.0 35.0 40.0 23.0 41.0 36 35.06095392227129 38.0 34.0 40.0 23.0 41.0 37 34.948233879730886 38.0 34.0 40.0 23.0 41.0 38 34.811033685524706 38.0 34.0 40.0 22.0 41.0 39 34.7187607795991 38.0 34.0 40.0 21.0 41.0 40 34.6516079809493 38.0 34.0 40.0 21.0 41.0 41 34.47981411693986 38.0 34.0 40.0 20.0 41.0 42 34.46041106975239 38.0 34.0 40.0 20.0 41.0 43 34.40948003606686 38.0 34.0 40.0 20.0 41.0 44 34.22326590063117 38.0 34.0 40.0 18.0 41.0 45 34.14289505930225 38.0 33.0 40.0 19.0 41.0 46 34.07703419415994 38.0 33.0 40.0 19.0 41.0 47 34.04562920491064 38.0 33.0 40.0 19.0 41.0 48 33.96547014079948 38.0 33.0 40.0 19.0 41.0 49 33.857509074515065 37.0 33.0 40.0 18.0 41.0 50 33.72538783436987 37.0 33.0 40.0 18.0 41.0 51 32.270696599079834 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 43.0 9 94.0 10 101.0 11 80.0 12 58.0 13 40.0 14 67.0 15 94.0 16 190.0 17 411.0 18 747.0 19 1387.0 20 2235.0 21 3415.0 22 5180.0 23 7975.0 24 12382.0 25 18175.0 26 23209.0 27 24166.0 28 23121.0 29 22732.0 30 24748.0 31 29037.0 32 36765.0 33 49669.0 34 72328.0 35 84544.0 36 102327.0 37 155088.0 38 209521.0 39 171379.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.95611865072943 19.952835641458396 22.335283101750168 19.755762606062007 2 39.282084479689274 21.385707349779207 24.105056296673062 15.22715187385846 3 30.570550019651815 20.978799158439877 33.54310683652001 14.907543985388298 4 26.400480891498855 23.544262825699953 32.75490717406885 17.300349108732345 5 23.299655515224377 27.598548077589996 32.05428525189004 17.047511155295584 6 24.0767576815481 32.15203569694587 30.68725868725869 13.083947934247336 7 64.85376736873742 17.087369662219963 14.848172381106513 3.210690587936097 8 76.97482255566088 4.442975053753497 15.40452685362865 3.177675536956974 9 71.35449564192079 6.721291008716158 17.174947402492315 4.749265946870737 10 35.1949691350889 29.957228400342174 23.002242619009085 11.845559845559846 11 26.393544956419206 25.399209303400923 32.478394562226896 15.728851177952974 12 24.06871199685571 22.951009178554088 35.36244884747879 17.617829977111416 13 22.97995514761982 21.978036205581116 36.63875338126835 18.403255265530717 14 19.55683998797771 24.972510577300998 36.78653503803204 18.684114396689246 15 19.203662173722055 24.85589438882852 38.10029362125171 17.84014981619772 16 23.4842438674774 24.827410815434767 35.315192009802786 16.373153307285044 17 23.2756109402816 24.36557001826463 34.09927635077336 18.259542690680416 18 23.11460476729938 24.15471759184334 34.74746260375003 17.983215037107254 19 22.669225256051604 25.945021154601992 33.18604489861975 18.199708690726656 20 23.68066954893302 26.0866067093612 33.21785772085173 17.014866020854043 21 23.571544170346563 25.157098929554017 34.56796060388875 16.703396296210666 22 23.04801979053476 22.74505814625575 35.20763877650106 18.999283286708437 23 21.16079809492983 24.956419207916213 35.06577578433866 18.817006912815295 24 20.968626453656395 24.708205211199225 35.09093010889418 19.232238226250203 25 21.919126996971308 25.510369222944075 33.44942547337757 19.121078306707048 26 20.877904422814602 26.043973828404965 33.25022541789009 19.827896330890344 27 20.36751208008693 25.624580953922273 34.501190668855344 19.50671629713546 28 19.979192194761055 25.63123945159873 34.254826254826256 20.134742098813955 29 20.95114789725568 25.406700113286938 34.12535546667283 19.516796522784546 30 22.023073544031625 23.959586618269253 34.59071047094999 19.426629366749125 31 22.58821353432132 24.295193396989802 33.142394747185165 19.97419832150371 32 22.696599079832612 25.090791390192592 32.38915219753543 19.823457332439368 33 22.458002913092734 25.187062169098095 31.45613021062123 20.89880470718794 34 20.66714447552771 26.549834693547268 32.78366818486579 19.999352646059233 35 21.271310660532215 26.90606431923797 31.52299262478903 20.299632395440778 36 21.991815596606017 28.151480822139508 29.71086398631309 20.145839594941393 37 21.889441194830418 28.137793910249 29.49982660162301 20.472938293297574 38 22.107414514600144 27.892446766698264 29.384412641897672 20.615726076803924 39 21.724273460800404 26.76540355582272 29.679236122349895 21.83108686102698 40 23.313434906249277 25.886574341664165 30.794442004022844 20.005548748063717 41 21.10272119852958 26.97061475504589 30.57406422675884 21.352599819665688 42 21.819804406630755 27.30696136684161 30.22994936767392 20.643284858853722 43 21.80574757820267 26.766605784569858 30.118512010727578 21.309134626499894 44 21.712528610732203 26.435345525165882 29.96888077127598 21.88324509282593 45 21.65213973597207 25.714378193420114 30.045730931958474 22.58775113864934 46 21.55004277159966 26.39678172612304 29.771160381938827 22.282015120338475 47 20.866621968418375 27.002427577277878 30.869165144614247 21.2617853096895 48 20.969181328462767 26.351466950269348 31.235937391626013 21.443414329641875 49 21.344184218435718 26.033986081890276 31.08223707026102 21.539592629412986 50 20.269021801955933 26.316694795736712 31.494139134857697 21.920144267449658 51 20.504658636395163 25.58324278084757 30.994289413451092 22.917809169306175 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 411.0 1 956.0 2 1501.0 3 17472.5 4 33444.0 5 22726.5 6 12009.0 7 11186.5 8 10364.0 9 10184.0 10 10004.0 11 9658.0 12 9312.0 13 9071.5 14 8831.0 15 8450.0 16 8069.0 17 7609.0 18 7149.0 19 7140.0 20 7131.0 21 6964.0 22 6797.0 23 7299.0 24 7801.0 25 8551.0 26 10485.5 27 11670.0 28 13629.5 29 15589.0 30 18324.5 31 21060.0 32 24240.0 33 27420.0 34 30713.0 35 34006.0 36 36092.0 37 38178.0 38 41800.5 39 45423.0 40 47236.0 41 49049.0 42 52903.0 43 56757.0 44 59823.0 45 62889.0 46 64730.0 47 66571.0 48 75026.0 49 83481.0 50 81166.5 51 78852.0 52 77788.0 53 76724.0 54 69636.0 55 62548.0 56 56964.0 57 51380.0 58 47525.5 59 43671.0 60 39568.0 61 35465.0 62 32005.0 63 28545.0 64 25085.0 65 21625.0 66 17897.0 67 14169.0 68 11387.0 69 8605.0 70 7342.0 71 6079.0 72 5088.5 73 4098.0 74 3223.0 75 1948.5 76 1549.0 77 1155.0 78 761.0 79 564.5 80 368.0 81 255.0 82 142.0 83 108.0 84 74.0 85 52.5 86 31.0 87 29.0 88 27.0 89 25.5 90 24.0 91 18.0 92 12.0 93 11.0 94 10.0 95 5.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1081325.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.1347838108158 #Duplication Level Percentage of deduplicated Percentage of total 1 72.72565217619847 26.279257188875167 2 8.960376819536355 6.47562558474783 3 4.251105161760567 4.608382979317836 4 2.569931622101687 3.7145569429289447 5 1.7429395971491082 3.1490372769146706 6 1.2833937615853557 2.78250936714219 7 1.0361003745463586 2.620748412837657 8 0.8342257619107171 2.411565404484548 9 0.6921383758703621 2.250924352132023 >10 5.806115368681489 39.70387660156419 >50 0.07612676060389745 1.7677735660063638 >100 0.01782087680303708 1.219280011361013 >500 0.0028004234861533084 0.71764021023102 >1k 0.0010183358131466576 0.5319056140950849 >5k 0.0 0.0 >10k+ 2.545839532866644E-4 1.7669164873615177 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19207 1.7762467343305666 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTT 1663 0.15379280049938732 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1418 0.13113541257253833 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC 1387 0.12826855940628396 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC 1314 0.12151758259542692 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05696714678750607 0.0 2 0.0 0.0 0.0 0.23036552377869743 0.0 3 0.0 0.0 0.0 0.39035442628257 0.0 4 0.0 0.0 0.0 0.5925138140707003 0.0 5 0.0 0.0 0.0 1.1593184287795066 0.0 6 0.0 0.0 0.0 1.7965921438975332 0.0 7 0.0 0.0 0.0 2.264906480475343 0.0 8 0.0 0.0 0.0 2.979492751947842 0.0 9 0.0 0.0 0.0 3.4362471967262387 0.0 10 0.0 0.0 0.0 4.060851270432109 0.0 11 0.0 0.0 0.0 4.566897093843202 0.0 12 9.247913439530206E-5 0.0 0.0 5.017177999213927 0.0 13 9.247913439530206E-5 0.0 0.0 5.244029315885603 0.0 14 9.247913439530206E-5 0.0 0.0 5.409382008184403 0.0 15 9.247913439530206E-5 0.0 0.0 5.5568862275449105 0.0 16 9.247913439530206E-5 0.0 0.0 5.768755924444547 0.0 17 9.247913439530206E-5 0.0 0.0 5.99764178207292 0.0 18 9.247913439530206E-5 0.0 0.0 6.273322081705315 0.0 19 9.247913439530206E-5 0.0 0.0 6.460129933183826 0.0 20 9.247913439530206E-5 0.0 0.0 6.652579011860449 0.0 21 9.247913439530206E-5 0.0 0.0 6.858715002427577 0.0 22 9.247913439530206E-5 0.0 0.0 7.0994381892585485 0.0 23 9.247913439530206E-5 0.0 0.0 7.337479481192056 0.0 24 9.247913439530206E-5 0.0 0.0 7.532887892169329 0.0 25 9.247913439530206E-5 0.0 0.0 7.717106327884771 0.0 26 9.247913439530206E-5 0.0 0.0 7.895498578133308 0.0 27 9.247913439530206E-5 0.0 0.0 8.105981088017016 0.0 28 9.247913439530206E-5 0.0 0.0 8.30767808013317 0.0 29 9.247913439530206E-5 0.0 0.0 8.526761149515641 0.0 30 9.247913439530206E-5 0.0 0.0 8.844334497029108 0.0 31 9.247913439530206E-5 0.0 0.0 9.08191339329064 0.0 32 9.247913439530206E-5 0.0 0.0 9.344924051510878 0.0 33 9.247913439530206E-5 0.0 0.0 9.586941946223384 0.0 34 9.247913439530206E-5 0.0 0.0 9.845976001664624 0.0 35 9.247913439530206E-5 0.0 0.0 10.121656301297019 0.0 36 9.247913439530206E-5 0.0 0.0 10.381152752410237 0.0 37 9.247913439530206E-5 0.0 0.0 10.643238619286523 0.0 38 9.247913439530206E-5 0.0 0.0 10.95886990497769 0.0 39 9.247913439530206E-5 0.0 0.0 11.396573648070653 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAA 20 7.0331024E-4 45.0 1 ACCGGGT 25 3.8906514E-5 45.0 4 TACGACG 20 7.0331024E-4 45.0 1 CGTTTTT 10280 0.0 43.708652 1 CGTTTTA 760 0.0 41.44737 1 CGTTGAT 45 1.9281288E-8 40.000004 25 CGCGAAG 45 1.9281288E-8 40.000004 2 ATAGCGT 40 3.4579716E-7 39.375 21 TACGCGG 60 1.5643309E-10 37.499996 2 TAAGACG 30 1.1398772E-4 37.499996 1 CGAATAT 170 0.0 37.058823 14 CGGGTAC 80 0.0 36.5625 6 ACAACGA 255 0.0 36.17647 13 GTTTTTT 12715 0.0 36.010616 2 TACGAAT 175 0.0 36.000004 12 TCGTTGA 50 4.8785296E-8 36.0 24 CGGTATA 25 0.0021070533 36.0 31 CACGTAA 25 0.0021070533 36.0 43 AATCGTT 50 4.8785296E-8 36.0 22 TTAAGCG 45 8.6992804E-7 35.000004 1 >>END_MODULE