##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936646.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 294510 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.047563749957558 31.0 31.0 33.0 28.0 34.0 2 31.116736273810737 31.0 31.0 34.0 28.0 34.0 3 30.724067094495943 31.0 30.0 34.0 27.0 34.0 4 34.708814641268546 35.0 35.0 37.0 32.0 37.0 5 35.07781739159961 35.0 35.0 37.0 33.0 37.0 6 35.11517435740722 35.0 35.0 37.0 32.0 37.0 7 31.277216393331297 35.0 35.0 37.0 0.0 37.0 8 33.25663984245017 36.0 35.0 37.0 17.0 37.0 9 36.40001018641133 39.0 35.0 39.0 32.0 39.0 10 36.18827204509185 37.0 35.0 39.0 32.0 39.0 11 36.5163491901803 38.0 35.0 39.0 32.0 39.0 12 36.53230111031883 38.0 35.0 39.0 32.0 39.0 13 36.36596380428509 39.0 35.0 39.0 32.0 39.0 14 37.39040100505925 39.0 36.0 41.0 32.0 41.0 15 37.66829988794947 39.0 36.0 41.0 33.0 41.0 16 37.57646599436352 39.0 36.0 41.0 33.0 41.0 17 37.515459576924385 39.0 36.0 41.0 33.0 41.0 18 37.339041119147055 39.0 36.0 40.0 32.0 41.0 19 37.05219517164103 38.0 36.0 40.0 32.0 41.0 20 36.93391395877899 38.0 35.0 40.0 32.0 41.0 21 36.88935520016298 38.0 35.0 40.0 32.0 41.0 22 36.945716614036876 38.0 35.0 40.0 32.0 41.0 23 36.999979627177346 38.0 35.0 40.0 32.0 41.0 24 36.913748259821396 38.0 35.0 40.0 32.0 41.0 25 36.615255848697835 38.0 35.0 40.0 31.0 41.0 26 36.59953482054939 38.0 35.0 40.0 31.0 41.0 27 36.64928525347187 38.0 35.0 40.0 31.0 41.0 28 36.65566873790364 38.0 35.0 40.0 31.0 41.0 29 36.6060099826831 38.0 35.0 40.0 31.0 41.0 30 36.336226274150285 38.0 35.0 40.0 31.0 41.0 31 36.190309327357305 38.0 35.0 40.0 30.0 41.0 32 35.83671861736443 38.0 35.0 40.0 29.0 41.0 33 35.53307867305015 38.0 35.0 40.0 27.0 41.0 34 35.32405011714373 38.0 35.0 40.0 25.0 41.0 35 35.11555465009677 38.0 34.0 40.0 24.0 41.0 36 35.03312960510679 38.0 34.0 40.0 24.0 41.0 37 34.9709585413059 38.0 34.0 40.0 23.0 41.0 38 34.83626362432515 38.0 34.0 40.0 23.0 41.0 39 34.818478150147705 38.0 34.0 40.0 23.0 41.0 40 34.74246375335303 38.0 34.0 40.0 23.0 41.0 41 34.62397202132355 38.0 34.0 40.0 22.0 41.0 42 34.615619164035174 38.0 34.0 40.0 22.0 41.0 43 34.545784523445725 38.0 34.0 40.0 22.0 41.0 44 34.31100471970392 38.0 34.0 40.0 20.0 41.0 45 34.20088282231503 38.0 33.0 40.0 20.0 41.0 46 34.136769549421075 38.0 33.0 40.0 20.0 41.0 47 34.10759566737971 38.0 33.0 40.0 20.0 41.0 48 34.044253166276185 37.0 33.0 40.0 20.0 41.0 49 33.943428066958674 37.0 33.0 40.0 20.0 41.0 50 33.74634817153917 37.0 33.0 40.0 18.0 41.0 51 32.138956232386 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 9.0 10 20.0 11 20.0 12 4.0 13 8.0 14 13.0 15 24.0 16 31.0 17 85.0 18 178.0 19 333.0 20 580.0 21 939.0 22 1328.0 23 2009.0 24 3230.0 25 4669.0 26 5953.0 27 6455.0 28 6237.0 29 6323.0 30 6871.0 31 8500.0 32 10832.0 33 15012.0 34 23433.0 35 26093.0 36 27579.0 37 40749.0 38 54834.0 39 42150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.14980815592 19.49950765678585 23.24165563138773 19.10902855590642 2 39.356218804115315 21.545957692438286 22.84302740144647 16.254796101999933 3 31.169739567417064 21.131031204373365 32.690570778581375 15.008658449628195 4 27.064276255475196 24.324810702522832 31.110318834674544 17.500594207327424 5 22.99548402431157 27.289735492852536 32.16053784251808 17.554242640317817 6 24.1910291670911 30.85803538080201 32.02743540117483 12.923500050932057 7 64.098672371057 16.284676241893315 15.77841159892703 3.8382397881226447 8 72.44372007741673 4.529897117245595 17.186173644358426 5.840209160979254 9 66.8391565651421 6.9668262537774615 19.81290957862212 6.381107602458321 10 34.97775966860209 23.29428542324539 26.79942956096567 14.928525347186852 11 27.707717904315643 24.583885097280227 31.776170588435026 15.932226409969102 12 26.830667889036025 21.122882075311534 35.74275915928152 16.303690876370922 13 20.879426844589318 26.47787851006757 35.889783029438725 16.752911615904384 14 17.182778173915995 29.21225085735629 35.41611490271977 18.188856066007943 15 16.20420359240773 25.88333163559811 41.38263556415742 16.529829207836748 16 17.564429051645106 25.304743472208074 38.97354928525347 18.157278190893347 17 18.999015313571697 23.432481070252283 34.80051611150725 22.76798750466877 18 20.352789378968456 24.016162439305965 36.693830430206106 18.937217751519473 19 20.910325625615428 25.469423788665917 35.26807239142983 18.35217819428882 20 23.162541170079116 24.93022308240807 34.19408509048928 17.71315065702353 21 21.258700893008726 26.15089470646158 35.16417099589148 17.426233404638214 22 19.057417405181486 23.652847101965975 34.84092220977216 22.44881328308037 23 17.83946215748192 26.341380598281894 34.30138195647007 21.51777528776612 24 19.244847373603612 24.20019693728566 36.95120708974228 19.603748599368444 25 17.512817900920172 25.307799395606263 35.056874129910696 22.122508573562868 26 17.5817459509015 28.225527146786188 35.21102848799701 18.981698414315304 27 18.47441513021629 27.713490204067774 35.95056195035822 17.861532715357715 28 17.44388985093885 25.546500967709072 37.760347696173305 19.24926148517877 29 16.70333774744491 25.72272588367118 37.95694543478999 19.61699093409392 30 19.723948253030457 25.259923262368 36.321347322671556 18.694781161929985 31 22.211130352110285 25.636820481477706 32.48480526977013 19.66724389664188 32 20.479440426471086 27.056127126413365 34.30579606804523 18.15863637907032 33 21.5429017690401 25.215442599572167 33.67491765984177 19.566737971545958 34 19.20036671080778 25.508132151709617 34.09663508879156 21.194866048691047 35 17.947777664595428 25.172659671997554 36.258531119486605 20.62103154392041 36 21.216257512478354 25.791314386608267 34.56690774506808 18.4255203558453 37 19.509694068113138 25.786900275033105 35.3010084547214 19.402397202132356 38 19.31649179993888 27.06223897320974 33.1608434348579 20.46042579199348 39 20.82577841159893 24.682014193066447 33.471528980340224 21.0206784149944 40 22.453566941699773 23.835862958812942 32.85966520661437 20.850904892872908 41 17.921292995144476 25.279277443889853 33.18155580455672 23.61787375640895 42 21.316423890530032 24.43007028623816 33.627381073647754 20.626124749584054 43 22.657634715289802 24.62836576007606 32.82638959627857 19.887609928355573 44 21.121863434178806 26.38789854334318 30.77926046653764 21.710977555940374 45 20.25533937727072 25.55465009677091 31.203694271841364 22.98631625411701 46 22.07157651692642 25.254830056704357 31.606397066313534 21.067196360055686 47 18.562697361719465 25.438864554684056 34.36589589487624 21.632542188720247 48 19.805439543648774 23.007368170860072 34.88336559030253 22.30382669518862 49 20.439034328206173 22.25832739126006 35.906420834606635 21.39621744592713 50 19.51376863264405 23.61108281552409 34.24637533530271 22.62877321652915 51 17.633017554582185 24.062340837323013 32.01419306644936 26.290448541645446 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 127.0 1 309.5 2 492.0 3 4474.0 4 8456.0 5 5744.0 6 3032.0 7 2947.5 8 2863.0 9 2826.0 10 2789.0 11 2697.5 12 2606.0 13 2446.5 14 2287.0 15 2177.5 16 2068.0 17 1945.0 18 1822.0 19 1826.0 20 1830.0 21 1720.0 22 1610.0 23 1582.0 24 1554.0 25 1773.0 26 2521.0 27 3050.0 28 3536.0 29 4022.0 30 4630.0 31 5238.0 32 5901.5 33 6565.0 34 7363.0 35 8161.0 36 9035.5 37 9910.0 38 11036.5 39 12163.0 40 14091.0 41 16019.0 42 19025.0 43 22031.0 44 25821.5 45 29612.0 46 31032.5 47 32453.0 48 30843.5 49 29234.0 50 24838.0 51 20442.0 52 17802.0 53 15162.0 54 13492.0 55 11822.0 56 10473.0 57 9124.0 58 8149.5 59 7175.0 60 6599.0 61 6023.0 62 5242.0 63 4461.0 64 3779.5 65 3098.0 66 2421.0 67 1744.0 68 1468.0 69 1192.0 70 1016.5 71 841.0 72 698.5 73 556.0 74 489.0 75 345.0 76 268.0 77 200.0 78 132.0 79 84.5 80 37.0 81 21.0 82 5.0 83 8.0 84 11.0 85 8.0 86 5.0 87 3.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 294510.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.36134362256805 #Duplication Level Percentage of deduplicated Percentage of total 1 72.98017621270162 25.806770886929087 2 11.135478218099365 7.8753094334366684 3 4.402460784722029 4.6703078578030865 4 2.3476902101614616 3.3206992096343377 5 1.4309520250679295 2.530019313291833 6 0.9828671941448455 2.085330275250311 7 0.6685456408827356 1.6548470494237073 8 0.5009099479966213 1.4170279036056972 9 0.39713573589556334 1.2638927899624004 >10 4.898339942899099 40.04161902664216 >50 0.21453312030149232 4.651915768239559 >100 0.03592182479466848 1.9131285873327437 >500 0.003991313866074276 1.0737090171991033 >1k 9.97828466518569E-4 1.6954228812493235 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4805 1.6315235475875185 No Hit GCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 975 0.33105836813690537 TruSeq Adapter, Index 19 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 914 0.3103459984380836 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGCT 653 0.22172421989066585 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 501 0.17011306916573293 TruSeq Adapter, Index 19 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 381 0.12936742385657535 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 344 0.11680418321958508 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2502461716070762 0.0 2 0.0 0.0 0.0 1.33204305456521 0.0 3 0.0 0.0 0.0 1.7632678007537945 0.0 4 0.0 0.0 0.0 2.392108926691793 0.0 5 3.395470442429799E-4 0.0 0.0 3.9075073851482123 0.0 6 3.395470442429799E-4 0.0 0.0 4.702387015721028 0.0 7 3.395470442429799E-4 0.0 0.0 5.5013412108247595 0.0 8 3.395470442429799E-4 0.0 0.0 6.873111269566398 0.0 9 3.395470442429799E-4 0.0 0.0 7.347798037418085 0.0 10 3.395470442429799E-4 0.0 0.0 8.478150147702964 0.0 11 3.395470442429799E-4 0.0 0.0 10.072323520423755 0.0 12 3.395470442429799E-4 0.0 0.0 11.305558385114258 0.0 13 3.395470442429799E-4 0.0 0.0 11.816576686699943 0.0 14 3.395470442429799E-4 0.0 0.0 12.032189059794234 0.0 15 3.395470442429799E-4 0.0 0.0 12.448134188991885 0.0 16 3.395470442429799E-4 0.0 0.0 13.405656853757089 0.0 17 3.395470442429799E-4 0.0 0.0 14.436861227123018 0.0 18 3.395470442429799E-4 0.0 0.0 15.698957590574175 0.0 19 3.395470442429799E-4 0.0 0.0 16.332212828087332 0.0 20 3.395470442429799E-4 0.0 0.0 16.93966249023802 0.0 21 3.395470442429799E-4 0.0 0.0 17.72469525652779 0.0 22 3.395470442429799E-4 0.0 0.0 18.493090217649655 0.0 23 3.395470442429799E-4 0.0 0.0 19.258429255373333 0.0 24 3.395470442429799E-4 0.0 0.0 19.84958065940036 0.0 25 3.395470442429799E-4 0.0 0.0 20.365352619605446 0.0 26 3.395470442429799E-4 0.0 0.0 20.83087161726257 0.0 27 3.395470442429799E-4 0.0 0.0 21.307595667379715 0.0 28 3.395470442429799E-4 0.0 0.0 21.792129299514446 0.0 29 3.395470442429799E-4 0.0 0.0 22.273946555295236 0.0 30 3.395470442429799E-4 0.0 0.0 22.850497436419815 0.0 31 3.395470442429799E-4 0.0 0.0 23.413126888730435 0.0 32 3.395470442429799E-4 0.0 0.0 23.92074971987369 0.0 33 3.395470442429799E-4 0.0 0.0 24.40188788156599 0.0 34 3.395470442429799E-4 0.0 0.0 24.883026043258294 0.0 35 3.395470442429799E-4 0.0 0.0 25.428678143356763 0.0 36 3.395470442429799E-4 0.0 0.0 25.926114563172728 0.0 37 3.395470442429799E-4 0.0 0.0 26.407592271909273 0.0 38 3.395470442429799E-4 0.0 0.0 26.885334963159146 0.0 39 3.395470442429799E-4 0.0 0.0 27.36783131302842 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAC 25 3.8837163E-5 45.000004 26 CACGGGT 35 1.207809E-7 45.000004 4 ACGTTGG 25 3.8837163E-5 45.000004 2 ATTCGGG 25 3.8837163E-5 45.000004 3 CACGACC 25 3.8837163E-5 45.000004 27 CGACAAT 35 1.207809E-7 45.000004 20 AGGCGAT 25 3.8837163E-5 45.000004 7 ACGGGAT 25 3.8837163E-5 45.000004 5 TCGTGCA 25 3.8837163E-5 45.000004 21 CTGCCTA 25 3.8837163E-5 45.000004 18 TCTCGCG 25 3.8837163E-5 45.000004 32 GTCAAGC 25 3.8837163E-5 45.000004 16 CGCAGTA 25 3.8837163E-5 45.000004 37 TGCCTAA 25 3.8837163E-5 45.000004 19 GACGGGT 25 3.8837163E-5 45.000004 4 GCTAGTC 25 3.8837163E-5 45.000004 27 AGACACG 25 3.8837163E-5 45.000004 24 CTCGCGC 25 3.8837163E-5 45.000004 33 GCGATAT 30 2.1599844E-6 45.000004 9 CGTACCT 25 3.8837163E-5 45.000004 45 >>END_MODULE