##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936645.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 174380 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.070363573804336 31.0 31.0 33.0 28.0 34.0 2 31.145848147723363 31.0 31.0 34.0 28.0 34.0 3 30.769526321825897 31.0 30.0 34.0 27.0 34.0 4 34.71329280880835 35.0 35.0 37.0 32.0 37.0 5 35.06861452001376 35.0 35.0 37.0 33.0 37.0 6 35.07287532973965 35.0 35.0 37.0 32.0 37.0 7 30.789597430898038 35.0 35.0 37.0 0.0 37.0 8 32.9528099552701 35.0 35.0 37.0 17.0 37.0 9 36.273735520128454 39.0 35.0 39.0 32.0 39.0 10 36.1101559811905 37.0 35.0 39.0 32.0 39.0 11 36.36315517834614 37.0 35.0 39.0 32.0 39.0 12 36.26601674503957 38.0 35.0 39.0 32.0 39.0 13 35.91470925564858 38.0 35.0 39.0 31.0 39.0 14 36.98679321023053 39.0 35.0 40.0 31.0 41.0 15 37.23037618993004 39.0 35.0 41.0 32.0 41.0 16 37.34298658102993 39.0 35.0 40.0 32.0 41.0 17 37.208808349581375 39.0 35.0 40.0 32.0 41.0 18 37.07106892992316 39.0 35.0 40.0 32.0 41.0 19 36.76496731276522 38.0 35.0 40.0 31.0 41.0 20 36.63765913522193 38.0 35.0 40.0 32.0 41.0 21 36.657397637343735 38.0 35.0 40.0 31.0 41.0 22 36.71419887601789 38.0 35.0 40.0 32.0 41.0 23 36.81113086363115 38.0 35.0 40.0 32.0 41.0 24 36.66063768780823 38.0 35.0 40.0 32.0 41.0 25 36.39364032572543 38.0 35.0 40.0 31.0 41.0 26 36.35351531138892 38.0 35.0 40.0 31.0 41.0 27 36.388834728753295 38.0 35.0 40.0 31.0 41.0 28 36.31151508200482 38.0 35.0 40.0 31.0 41.0 29 36.31543181557518 38.0 35.0 40.0 31.0 41.0 30 36.07428604197729 38.0 35.0 40.0 30.0 41.0 31 35.74907099438009 38.0 35.0 40.0 30.0 41.0 32 35.46629774056658 38.0 34.0 40.0 29.0 41.0 33 35.171097602936115 38.0 34.0 40.0 26.0 41.0 34 34.88097258859961 38.0 34.0 40.0 24.0 41.0 35 34.757552471613714 38.0 34.0 40.0 23.0 41.0 36 34.43881179034293 38.0 34.0 40.0 22.0 41.0 37 34.307523798600755 38.0 33.0 40.0 21.0 41.0 38 34.05247734831976 37.0 33.0 40.0 20.0 41.0 39 34.06433077187751 37.0 33.0 40.0 20.0 41.0 40 34.01723248078908 37.0 33.0 40.0 19.0 41.0 41 33.785049891042554 37.0 33.0 40.0 18.0 41.0 42 33.85697327675192 37.0 33.0 40.0 18.0 41.0 43 33.724303245785066 37.0 33.0 40.0 18.0 41.0 44 33.42071338456245 37.0 33.0 40.0 17.0 41.0 45 33.32604656497305 37.0 33.0 40.0 17.0 41.0 46 33.12636196811561 36.0 32.0 40.0 15.0 41.0 47 33.0331402683794 36.0 32.0 40.0 15.0 41.0 48 32.927583438467714 36.0 32.0 40.0 15.0 41.0 49 32.88401192797339 36.0 32.0 40.0 14.0 41.0 50 32.67886798944833 36.0 31.0 40.0 13.0 41.0 51 30.81466911343044 35.0 28.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 10.0 10 10.0 11 8.0 12 3.0 13 2.0 14 6.0 15 12.0 16 23.0 17 46.0 18 133.0 19 205.0 20 390.0 21 635.0 22 945.0 23 1439.0 24 2198.0 25 3220.0 26 4134.0 27 4273.0 28 4298.0 29 4269.0 30 4901.0 31 5722.0 32 7472.0 33 10099.0 34 16061.0 35 16953.0 36 15085.0 37 21952.0 38 28441.0 39 21427.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.446381465764425 20.319990824635852 23.436747333409794 18.796880376189932 2 35.122720495469665 24.86638375960546 23.89780938180984 16.113086363115038 3 27.921206560385365 25.441564399587108 33.300837251978436 13.336391788049088 4 26.15609588255534 22.052414267691248 35.528730358986124 16.26275949076729 5 25.77130404862943 25.93474022250258 30.758114462667734 17.535841266200254 6 22.21470352104599 34.03142562220438 30.41461176740452 13.33925908934511 7 61.28971212294988 17.56967542149329 17.344878999885307 3.7957334556715217 8 72.16997362082807 6.798944833123064 16.144053217112052 4.887028328936804 9 68.80949650189243 5.7443514164468406 16.95320564284895 8.49294643881179 10 40.95825209312995 20.295905493749284 25.262071338456245 13.483771074664524 11 33.24865236839087 23.00894598004358 28.937951599954125 14.804450051611424 12 29.227549030852163 20.51554077302443 33.235462782429174 17.021447413694233 13 19.58080055052185 28.91329280880835 35.56141759376075 15.94448904690905 14 16.74045188668425 31.370570019497652 33.65580915242574 18.23316894139236 15 14.04289482738846 24.314714990251176 46.01101043697672 15.631379745383644 16 16.599380662920062 21.793210230531024 41.257024888175245 20.350384218373666 17 17.502007110907215 20.561991054019956 36.51565546507627 25.42034636999656 18 19.07099438008946 22.36667048973506 38.609932331689414 19.952402798486066 19 21.266200252322516 24.549260236265628 34.365179493061135 19.81936001835073 20 23.604771189356576 23.892648239477005 35.085445578621396 17.417134992545016 21 19.94896203693084 27.94586535153114 34.518866842527814 17.586305769010206 22 18.5652024314715 21.879802729670832 35.22192912031196 24.333065718545704 23 17.208395458194747 26.819589402454408 34.107695836678516 21.864319302672325 24 19.53435026952632 21.838513591008144 37.53240050464503 21.09473563482051 25 15.5539626103911 27.35233398325496 36.27938983828421 20.814313568069736 26 17.074779217800206 27.428604197729094 34.10310815460489 21.39350842986581 27 17.343732079366898 29.762013992430326 34.10310815460489 18.79114577359789 28 15.649157013418971 24.295790801697443 41.97901135451313 18.076040830370456 29 18.48434453492373 23.27445808005505 38.73838742975112 19.502809955270102 30 20.17203807776121 25.69446037389609 36.81098749856635 17.32251404977635 31 24.185686431930268 23.320334900791376 32.89941507053561 19.594563596742745 32 22.817983713728637 26.689413923615096 33.61738731505907 16.8752150475972 33 21.705470810872807 23.776809267117788 33.58125931872921 20.936460603280192 34 22.381580456474367 24.454065833237756 33.03131093015254 20.133042780135337 35 20.963413235462784 23.453377680926714 34.28030737469893 21.302901708911573 36 24.67484803303131 23.019841724968458 33.172382153916736 19.132928088083496 37 20.357839201743317 25.184080743204497 36.62633329510265 17.831746759949535 38 18.21596513361624 26.12398210803991 34.273425851588485 21.386626906755364 39 21.330427801353366 24.561876361968118 34.50797109760293 19.599724739075583 40 22.145888289941507 22.78013533662117 35.48400045876821 19.589975914669115 41 19.339373781396947 23.28707420575754 32.533547425163434 24.840004587682074 42 21.61084986810414 21.919371487555914 33.947126964101386 22.52265168023856 43 22.59204037160225 23.968344993691936 29.995985778185574 23.44362885652024 44 20.128455098061703 25.330313109301528 33.354169056084416 21.187062736552356 45 19.98164927170547 25.934166762243375 31.316091294873267 22.768092671177886 46 23.371372863860536 26.098176396375734 31.02133272164239 19.509118018121345 47 20.229384103681614 22.736552356921667 35.74664525748366 21.287418281913066 48 21.556944603738962 23.26815001720381 33.58584700080284 21.589058378254386 49 19.581947471040255 20.078564055510952 36.84195435256336 23.497534120885422 50 20.29074435141645 23.62312191765111 33.71258171808694 22.37355201284551 51 19.290629659364605 24.731620598692512 30.80800550521849 25.169744236724394 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 100.0 1 164.5 2 229.0 3 2326.5 4 4424.0 5 3071.0 6 1718.0 7 1696.0 8 1674.0 9 1673.0 10 1672.0 11 1575.0 12 1478.0 13 1437.5 14 1397.0 15 1348.5 16 1300.0 17 1206.0 18 1112.0 19 1085.5 20 1059.0 21 1220.5 22 1382.0 23 1213.0 24 1044.0 25 966.0 26 1012.0 27 1136.0 28 1497.5 29 1859.0 30 2332.5 31 2806.0 32 3058.5 33 3311.0 34 3514.0 35 3717.0 36 4622.0 37 5527.0 38 6250.5 39 6974.0 40 8056.0 41 9138.0 42 11346.5 43 13555.0 44 14573.0 45 15591.0 46 19150.5 47 22710.0 48 19701.5 49 16693.0 50 15598.5 51 14504.0 52 12526.0 53 10548.0 54 9026.0 55 7504.0 56 6367.5 57 5231.0 58 4813.5 59 4396.0 60 4097.5 61 3799.0 62 3134.5 63 2470.0 64 2061.5 65 1653.0 66 1175.0 67 697.0 68 580.5 69 464.0 70 374.0 71 284.0 72 227.5 73 171.0 74 119.5 75 54.0 76 40.0 77 29.5 78 19.0 79 19.0 80 19.0 81 14.0 82 9.0 83 8.5 84 8.0 85 4.5 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 174380.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.78598463126505 #Duplication Level Percentage of deduplicated Percentage of total 1 78.40910771050491 30.411744466108498 2 8.500036963110816 6.59364606032802 3 3.2217047386708066 3.748709714416791 4 1.752051452650255 2.718201628627136 5 1.1621202040363716 2.253698818671866 6 0.8176240112367857 1.902741140038995 7 0.6002809196421971 1.6297740566578738 8 0.39328749907592225 1.220323431586191 9 0.3134471797146448 1.0941621745613028 >10 4.716492940045834 40.14049776350499 >50 0.08279736822650995 1.9669686890698475 >100 0.023656390921859984 1.804679435715105 >500 0.001478524432616249 0.4398440188094965 >1k 0.005914097730464996 4.075008601903888 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2510 1.4393852506021332 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGC 1784 1.0230531024200022 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCG 1690 0.9691478380548229 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTC 1122 0.6434224108269296 No Hit GCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCTGC 767 0.4398440188094965 RNA PCR Primer, Index 35 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCTGC 415 0.23798600756967542 RNA PCR Primer, Index 10 (95% over 23bp) ACTGATGGGGTTTTATTATTAGTAATATTAAATACTTATTTTGCTTCTAAT 316 0.18121344190847574 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCT 301 0.17261153802041518 No Hit CTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCTGCT 267 0.15311388920747793 TruSeq Adapter, Index 10 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCT 228 0.13074893909852048 RNA PCR Primer, Index 35 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTC 215 0.123293955728868 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTA 210 0.1204266544328478 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 175 0.10035554536070651 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.734602592040372E-4 0.0 0.0 0.21332721642390182 0.0 2 5.734602592040372E-4 0.0 0.0 1.312077073058837 0.0 3 5.734602592040372E-4 0.0 0.0 1.5833237756623466 0.0 4 5.734602592040372E-4 0.0 0.0 2.06675077417135 0.0 5 5.734602592040372E-4 0.0 0.0 3.67760064227549 0.0 6 5.734602592040372E-4 0.0 0.0 4.220094047482509 0.0 7 5.734602592040372E-4 0.0 0.0 4.9707535267805945 0.0 8 5.734602592040372E-4 0.0 0.0 6.120541346484688 0.0 9 5.734602592040372E-4 0.0 0.0 6.477807087968804 0.0 10 5.734602592040372E-4 0.0 0.0 8.598463126505333 0.0 11 5.734602592040372E-4 0.0 0.0 9.869824521160684 0.0 12 5.734602592040372E-4 0.0 0.0 12.180295905493749 0.0 13 5.734602592040372E-4 0.0 0.0 12.733685055625646 0.0 14 5.734602592040372E-4 0.0 0.0 12.955040715678404 0.0 15 5.734602592040372E-4 0.0 0.0 13.447643078334671 0.0 16 5.734602592040372E-4 0.0 0.0 14.23156325266659 0.0 17 5.734602592040372E-4 0.0 0.0 15.0711090721413 0.0 18 5.734602592040372E-4 0.0 0.0 16.152655121000116 0.0 19 5.734602592040372E-4 0.0 0.0 16.78002064456933 0.0 20 5.734602592040372E-4 0.0 0.0 17.309897924073862 0.0 21 5.734602592040372E-4 0.0 0.0 17.908590434682875 0.0 22 5.734602592040372E-4 0.0 0.0 18.542837481362543 0.0 23 5.734602592040372E-4 0.0 0.0 19.246473219405896 0.0 24 5.734602592040372E-4 0.0 0.0 19.751691707764653 0.0 25 5.734602592040372E-4 0.0 0.0 20.17433191879803 0.0 26 5.734602592040372E-4 0.0 0.0 20.560844133501547 0.0 27 5.734602592040372E-4 0.0 0.0 20.932446381465766 0.0 28 5.734602592040372E-4 0.0 0.0 21.325840119279732 0.0 29 5.734602592040372E-4 0.0 0.0 21.746759949535498 0.0 30 5.734602592040372E-4 0.0 0.0 22.243949994265396 0.0 31 5.734602592040372E-4 0.0 0.0 22.70329166188783 0.0 32 5.734602592040372E-4 0.0 0.0 23.138547998623697 0.0 33 5.734602592040372E-4 0.0 0.0 23.573804335359558 0.0 34 5.734602592040372E-4 0.0 0.0 23.99300378483771 0.0 35 5.734602592040372E-4 0.0 0.0 24.440876247276062 0.0 36 5.734602592040372E-4 0.0 0.0 24.853194173643768 0.0 37 5.734602592040372E-4 0.0 0.0 25.25863057690102 0.0 38 5.734602592040372E-4 0.0 0.0 25.6818442481936 0.0 39 5.734602592040372E-4 0.0 0.0 26.06950338341553 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGGGA 20 7.0168154E-4 45.0 4 ACTATAC 20 7.0168154E-4 45.0 41 ATCTCAG 20 7.0168154E-4 45.0 33 GCGACCG 20 7.0168154E-4 45.0 19 CTGTACT 20 7.0168154E-4 45.0 24 CCAGGGT 20 7.0168154E-4 45.0 4 CACGCCG 20 7.0168154E-4 45.0 26 ACACAAT 20 7.0168154E-4 45.0 35 TTGTACG 20 7.0168154E-4 45.0 1 TACGGGT 35 1.2040073E-7 45.0 4 TACGGGA 40 6.7575456E-9 45.0 4 TGAAACG 35 1.2040073E-7 45.0 4 AGGCGAT 20 7.0168154E-4 45.0 7 TAACGAG 20 7.0168154E-4 45.0 23 TCGATGG 20 7.0168154E-4 45.0 2 ATCGTGA 20 7.0168154E-4 45.0 30 ATCCGTA 20 7.0168154E-4 45.0 44 AGGCCAC 20 7.0168154E-4 45.0 19 CTAGTAG 20 7.0168154E-4 45.0 13 CGAGGAC 20 7.0168154E-4 45.0 26 >>END_MODULE