##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936643.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1031091 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20017340855463 31.0 31.0 33.0 28.0 34.0 2 31.228792608993775 31.0 31.0 34.0 28.0 34.0 3 30.96642100454761 31.0 31.0 34.0 28.0 34.0 4 34.94747408327684 35.0 35.0 37.0 32.0 37.0 5 35.20463470246564 35.0 35.0 37.0 33.0 37.0 6 35.185234862878254 36.0 35.0 37.0 32.0 37.0 7 31.07209256990896 35.0 35.0 37.0 0.0 37.0 8 33.1451074638417 37.0 35.0 37.0 17.0 37.0 9 36.514149575546675 39.0 35.0 39.0 32.0 39.0 10 36.13687928611539 37.0 35.0 39.0 32.0 39.0 11 36.42893692215333 38.0 35.0 39.0 32.0 39.0 12 36.58190887128294 38.0 35.0 39.0 32.0 39.0 13 36.62277723304732 39.0 35.0 39.0 32.0 39.0 14 37.72190427421052 39.0 37.0 41.0 33.0 41.0 15 37.88816796965544 40.0 37.0 41.0 33.0 41.0 16 37.797907265217134 39.0 37.0 41.0 33.0 41.0 17 37.693910624765415 39.0 36.0 41.0 33.0 41.0 18 37.601844066139655 39.0 36.0 40.0 33.0 41.0 19 37.394513190397355 39.0 36.0 40.0 32.0 41.0 20 37.393536554969444 39.0 36.0 40.0 32.0 41.0 21 37.385783602029306 39.0 36.0 40.0 32.0 41.0 22 37.492965218394886 39.0 36.0 40.0 33.0 41.0 23 37.538985404779986 39.0 36.0 41.0 33.0 41.0 24 37.47311633987689 39.0 36.0 41.0 33.0 41.0 25 37.154893215050855 39.0 35.0 40.0 32.0 41.0 26 37.15817808515446 39.0 35.0 40.0 32.0 41.0 27 37.21898164177556 39.0 35.0 40.0 32.0 41.0 28 37.23225205146782 39.0 35.0 41.0 32.0 41.0 29 37.23856090296589 39.0 35.0 41.0 32.0 41.0 30 37.01234905551498 39.0 35.0 40.0 31.0 41.0 31 37.00909619034596 39.0 35.0 40.0 31.0 41.0 32 36.86899604399612 39.0 35.0 40.0 31.0 41.0 33 36.73610088731257 39.0 35.0 40.0 31.0 41.0 34 36.64906977172723 39.0 35.0 40.0 30.0 41.0 35 36.5584773797851 39.0 35.0 41.0 30.0 41.0 36 36.508801841932474 39.0 35.0 40.0 30.0 41.0 37 36.442779541282 39.0 35.0 40.0 30.0 41.0 38 36.33708275991159 39.0 35.0 40.0 30.0 41.0 39 36.310802829236216 39.0 35.0 40.0 30.0 41.0 40 36.23011935900905 39.0 35.0 40.0 30.0 41.0 41 36.07209644929497 39.0 35.0 40.0 29.0 41.0 42 36.071749244247115 39.0 35.0 40.0 29.0 41.0 43 36.026779401624104 39.0 35.0 40.0 29.0 41.0 44 35.85410502079836 39.0 35.0 40.0 28.0 41.0 45 35.77985260272857 38.0 35.0 40.0 28.0 41.0 46 35.66992535091471 38.0 35.0 40.0 28.0 41.0 47 35.639965822609255 38.0 35.0 40.0 28.0 41.0 48 35.56660372362866 38.0 35.0 40.0 28.0 41.0 49 35.46904007502732 38.0 35.0 40.0 27.0 41.0 50 35.320320902810714 38.0 34.0 40.0 27.0 41.0 51 33.732028501849015 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 33.0 9 85.0 10 94.0 11 68.0 12 35.0 13 33.0 14 36.0 15 58.0 16 112.0 17 214.0 18 445.0 19 762.0 20 1249.0 21 1845.0 22 3013.0 23 4408.0 24 6582.0 25 9177.0 26 11978.0 27 13494.0 28 14712.0 29 16925.0 30 20578.0 31 25990.0 32 34319.0 33 47124.0 34 71201.0 35 82037.0 36 102854.0 37 158363.0 38 219076.0 39 184182.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.00665314700642 21.775575579653008 25.30513795581573 12.912633317524836 2 33.965867222194746 24.116494082481566 25.747290976257187 16.170347719066502 3 31.815329587786138 24.06276458624893 28.719773521444765 15.402132304520164 4 28.64315564775563 25.675522335080025 27.587574714549927 18.093747302614418 5 25.987424970249958 29.302263330782637 26.598913190009416 18.111398508957986 6 25.976271735472427 34.61954376480834 25.75068543901557 13.653499060703664 7 70.08149620159617 17.24454970511817 9.307616883475852 3.3663372098098034 8 82.68872485551711 5.016628018283546 8.87312565040331 3.421521475796026 9 76.5361156289794 7.461029142917551 10.487629122938714 5.515226105164336 10 37.27255887210731 29.434744363009667 18.845184372669337 14.447512392213685 11 27.939435025618497 27.548295931202972 27.13950563044387 17.372763412734667 12 25.276721453295586 25.577179899737267 29.930917833634467 19.215180813332676 13 23.49288278144218 25.505702212510826 31.955375422731848 19.04603958331515 14 20.41856635350323 28.2785903475057 30.884761868739037 20.418081430252034 15 20.18056602181573 27.214377780428688 33.28930230212464 19.315753895630937 16 23.254882449754678 27.032725530530282 30.759845639230676 18.95254638048436 17 23.376210247204174 26.36983544614394 29.709113938536944 20.54484036811494 18 23.963549289054022 25.924675901545065 30.820751999581024 19.291022809819893 19 23.057615671167724 27.71530349891523 28.916846330731232 20.310234499185814 20 25.009431757235784 27.109634358170133 29.949732855780915 17.93120102881317 21 23.633801478240038 27.872903555554263 30.036340148444708 18.45695481776099 22 23.663090842612338 24.679974900372518 30.434753091628185 21.222181165386957 23 21.683052223324616 26.655067302498033 31.052642298303446 20.609238175873905 24 21.32032963142923 26.518027991709754 31.49169180993724 20.669950566923774 25 20.904071512601703 28.72695038556248 29.56809825708885 20.800879844746973 26 21.18047776578401 29.3511435945033 29.085114698896607 20.383263940816086 27 21.27542573836839 28.635784814337434 30.04710544462128 20.041684002672895 28 19.99716804821301 28.485749560417073 30.815708797768576 20.701373593601343 29 21.33933862287616 27.276253987281436 30.63376559391945 20.75064179592296 30 20.78148291469909 27.146294555960626 31.737838852244852 20.334383677095428 31 23.196012767059358 27.279551465389574 28.770787447470692 20.75364832008038 32 22.27727717534146 27.739161722874123 29.412631862755084 20.57092923902934 33 22.091260616182275 26.486701949682423 29.851584389738633 21.570453044396665 34 21.93055705073558 27.13281368957735 30.151072989677925 20.785556270009145 35 21.08873028665753 27.287601191359446 30.760330562481876 20.86333795950115 36 22.76724362835094 28.031376474045455 28.93100608966619 20.270373807937418 37 21.97255140428924 27.969112328591756 29.595544913106604 20.4627913540124 38 21.54998928319615 28.002959971525303 29.231270566807392 21.215780178471153 39 22.530504097116548 26.28274323022895 29.548701327040973 21.63805134561353 40 22.769765229257168 26.17819377727087 30.46627310295599 20.585767890515967 41 21.359123491524993 27.92537225133378 29.498172324266235 21.217331932874984 42 22.29948666024628 26.872991811585976 29.743543489371937 21.0839780387958 43 22.522745325097397 26.36770178383867 28.96650247165381 22.14305041941012 44 21.768010776934336 26.49232705939631 29.246206202944258 22.493455960725093 45 21.578308801066054 26.5496449876878 29.02731184735392 22.84473436389223 46 22.233343128783005 26.933704202635848 29.214007299064775 21.618945369516368 47 21.222278150037194 26.8599958684539 30.600596843537573 21.31712913797133 48 21.533016969404255 26.51773703775903 30.378017071238133 21.57122892159858 49 22.212588413631774 25.67503741182883 30.59487474917345 21.517499425365948 50 20.755006105183732 26.327356169339076 30.789716911504417 22.127920813972775 51 21.035291744375616 25.635952597782346 29.56809825708885 23.760657400753182 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 261.0 1 816.0 2 1371.0 3 6194.0 4 11017.0 5 7708.5 6 4400.0 7 4062.0 8 3724.0 9 3724.5 10 3725.0 11 3577.0 12 3429.0 13 3469.0 14 3509.0 15 3405.5 16 3302.0 17 3305.0 18 3308.0 19 3443.0 20 3578.0 21 3921.0 22 4264.0 23 4877.0 24 5490.0 25 6689.5 26 9455.5 27 11022.0 28 12804.0 29 14586.0 30 18462.5 31 22339.0 32 25479.0 33 28619.0 34 33007.0 35 37395.0 36 40248.0 37 43101.0 38 46144.0 39 49187.0 40 54308.0 41 59429.0 42 62279.0 43 65129.0 44 69344.5 45 73560.0 46 83679.5 47 93799.0 48 92225.0 49 90651.0 50 87333.5 51 84016.0 52 76320.0 53 68624.0 54 62014.0 55 55404.0 56 50020.0 57 44636.0 58 41058.0 59 37480.0 60 33364.0 61 29248.0 62 26013.0 63 22778.0 64 18946.0 65 15114.0 66 12603.0 67 10092.0 68 8203.5 69 6315.0 70 5036.0 71 3757.0 72 3072.0 73 2387.0 74 1883.0 75 1194.0 76 1009.0 77 707.5 78 406.0 79 273.5 80 141.0 81 124.0 82 107.0 83 77.5 84 48.0 85 43.0 86 38.0 87 25.0 88 12.0 89 11.0 90 10.0 91 7.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1031091.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.14253513789935 #Duplication Level Percentage of deduplicated Percentage of total 1 72.7327387476526 23.378146108720774 2 9.231686093946193 5.934595893134446 3 3.970230244924032 3.8283979545906432 4 2.441216330195788 3.138675266901273 5 1.6737112473146025 2.6898661288753485 6 1.205109942286574 2.3241173198986846 7 0.8798744902910924 1.9796977704785907 8 0.6973921172985998 1.7932760508131422 9 0.5473419253711983 1.5833661361820301 >10 6.366029356394767 45.84954885512931 >50 0.2250914966026512 4.350222869329609 >100 0.02662020694997291 1.4638115011821338 >500 0.001478900385969247 0.28416786236114433 >1k 0.0011831203087753976 0.8442323913572972 >5k 2.957800771938494E-4 0.5578778910455653 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5868 0.5691059276048379 No Hit GAATCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTC 2673 0.2592399700899339 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCG 2485 0.24100685584492543 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGC 2390 0.2317933140721818 No Hit GCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGC 1332 0.1291835541188896 TruSeq Adapter, Index 14 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9396930047881322E-4 0.0 0.0 0.06973196352213336 0.0 2 1.9396930047881322E-4 0.0 0.0 0.3592311444867621 0.0 3 1.9396930047881322E-4 0.0 0.0 0.49433076227025546 0.0 4 1.9396930047881322E-4 0.0 0.0 0.7709309847530431 0.0 5 1.9396930047881322E-4 0.0 0.0 1.5253745789653872 0.0 6 1.9396930047881322E-4 0.0 0.0 1.9970109330796215 0.0 7 1.9396930047881322E-4 0.0 0.0 2.3867922423917967 0.0 8 1.9396930047881322E-4 0.0 0.0 3.0069120960225626 0.0 9 1.9396930047881322E-4 0.0 0.0 3.2478219672172486 0.0 10 1.9396930047881322E-4 0.0 0.0 3.9912093113023004 0.0 11 1.9396930047881322E-4 0.0 0.0 4.658463704949417 0.0 12 1.9396930047881322E-4 0.0 0.0 5.4482097118489055 0.0 13 1.9396930047881322E-4 0.0 0.0 5.71879688601685 0.0 14 1.9396930047881322E-4 0.0 0.0 5.850986964293162 0.0 15 1.9396930047881322E-4 0.0 0.0 6.0686205194303895 0.0 16 1.9396930047881322E-4 0.0 0.0 6.455492289235383 0.0 17 1.9396930047881322E-4 0.0 0.0 6.904725189144314 0.0 18 1.9396930047881322E-4 0.0 0.0 7.381986652972434 0.0 19 1.9396930047881322E-4 0.0 0.0 7.704751568969179 0.0 20 1.9396930047881322E-4 0.0 0.0 8.023540114306108 0.0 21 1.9396930047881322E-4 0.0 0.0 8.41225459246565 0.0 22 1.9396930047881322E-4 0.0 0.0 8.826088095037198 0.0 23 1.9396930047881322E-4 0.0 0.0 9.248747200780532 0.0 24 1.9396930047881322E-4 0.0 0.0 9.581986459003133 0.0 25 1.9396930047881322E-4 0.0 0.0 9.904945344300357 0.0 26 1.9396930047881322E-4 0.0 0.0 10.216072102268374 0.0 27 1.9396930047881322E-4 0.0 0.0 10.510517500395212 0.0 28 1.9396930047881322E-4 0.0 0.0 10.821353304412511 0.0 29 1.9396930047881322E-4 0.0 0.0 11.14993729942362 0.0 30 1.9396930047881322E-4 0.0 0.0 11.546022611001357 0.0 31 1.9396930047881322E-4 0.0 0.0 11.898852768572318 0.0 32 1.9396930047881322E-4 0.0 0.0 12.257792959108363 0.0 33 1.9396930047881322E-4 0.0 0.0 12.600536713054424 0.0 34 1.9396930047881322E-4 0.0 0.0 12.935036771730138 0.0 35 1.9396930047881322E-4 0.0 0.0 13.28932169905469 0.0 36 1.9396930047881322E-4 0.0 0.0 13.643121703128045 0.0 37 1.9396930047881322E-4 0.0 0.0 13.983537825468364 0.0 38 1.9396930047881322E-4 0.0 0.0 14.347230263866138 0.0 39 1.9396930047881322E-4 0.0 0.0 14.741666836389804 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAACG 20 7.032947E-4 45.000004 23 TTACGCG 20 7.032947E-4 45.000004 1 ATCGACG 20 7.032947E-4 45.000004 1 ACGCATT 50 2.1827873E-11 45.0 39 CTAACGC 50 2.1827873E-11 45.0 36 CGTTTTT 3510 0.0 41.474358 1 CCCGCAC 230 0.0 41.08696 33 CGTTTTA 165 0.0 39.545452 1 TCAAGCG 185 0.0 38.918922 17 CTATGCG 35 6.247663E-6 38.571426 1 TCAATCG 35 6.247663E-6 38.571426 8 TATCGCG 35 6.247663E-6 38.571426 1 CACGTGA 170 0.0 38.38235 43 TTAAGCG 65 9.094947E-12 38.076927 1 TATGCGG 95 0.0 37.894737 2 GTTACGG 95 0.0 37.894737 2 TACGGTT 60 1.546141E-10 37.500004 33 CCGCACT 255 0.0 37.058823 34 TACGGCT 250 0.0 36.899998 7 TAGTGCG 55 2.748493E-9 36.81818 1 >>END_MODULE